RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 LSM2Q9Y333 95 aaKnown RBP10.6□□□□□ -0.71
CSPG4P12-201ENST00000558282 MYO18AQ92614 2054 aaKnown RBP10.6□□□□□ -0.71
CSPG4P12-201ENST00000558282 SAPCD1Q5SSQ6 148 aa10.6□□□□□ -0.71
CSPG4P12-201ENST00000558282 LDLRAD3Q86YD5 345 aa10.6□□□□□ -0.71
CSPG4P12-201ENST00000558282 TCEAL8Q8IYN2 117 aa10.6□□□□□ -0.71
CSPG4P12-201ENST00000558282 TMEM104Q8NE00 496 aa10.6□□□□□ -0.71
CSPG4P12-201ENST00000558282 RSG1Q9BU20 258 aa10.6□□□□□ -0.71
CSPG4P12-201ENST00000558282 TXNIPQ9H3M7 391 aa10.6□□□□□ -0.71
CSPG4P12-201ENST00000558282 SLCO1C1Q9NYB5 712 aa10.6□□□□□ -0.71
CSPG4P12-201ENST00000558282 HSPB8Q9UJY1 196 aa10.6□□□□□ -0.71
CSPG4P12-201ENST00000558282 LRP5O75197 1615 aa10.6□□□□□ -0.71
CSPG4P12-201ENST00000558282 TRBV23-1A0A0A0MS06 115 aa10.59□□□□□ -0.71
CSPG4P12-201ENST00000558282 VAMP5O95183 116 aa10.59□□□□□ -0.71
CSPG4P12-201ENST00000558282 HPP00738 406 aa10.59□□□□□ -0.71
CSPG4P12-201ENST00000558282 SEMG1P04279 462 aa10.59□□□□□ -0.71
CSPG4P12-201ENST00000558282 HLA-GP17693 338 aa10.59□□□□□ -0.71
CSPG4P12-201ENST00000558282 CXCL2P19875 107 aa10.59□□□□□ -0.71
CSPG4P12-201ENST00000558282 IRS1P35568 1242 aa10.59□□□□□ -0.71
CSPG4P12-201ENST00000558282 ERVFRD-1P60508 538 aa10.59□□□□□ -0.71
CSPG4P12-201ENST00000558282 SLC38A11Q08AI6 406 aa10.59□□□□□ -0.71
CSPG4P12-201ENST00000558282 OR2M7Q8NG81 312 aa10.59□□□□□ -0.71
CSPG4P12-201ENST00000558282 OR1P1Q8NH06 330 aa10.59□□□□□ -0.71
CSPG4P12-201ENST00000558282 GMPPAQ96IJ6 420 aaPredicted RBP10.59□□□□□ -0.71
CSPG4P12-201ENST00000558282 SFXN1Q9H9B4 322 aa10.59□□□□□ -0.71
CSPG4P12-201ENST00000558282 KIAA1456Q9P272 454 aa10.59□□□□□ -0.71
CSPG4P12-201ENST00000558282 POLDIP2Q9Y2S7 368 aa10.59□□□□□ -0.71
CSPG4P12-201ENST00000558282 NTSR1P30989 418 aa10.59□□□□□ -0.71
CSPG4P12-201ENST00000558282 BRS3P32247 399 aa10.59□□□□□ -0.71
CSPG4P12-201ENST00000558282 RPL18Q07020 188 aaKnown RBP10.59□□□□□ -0.71
CSPG4P12-201ENST00000558282 FZD2Q14332 565 aa10.59□□□□□ -0.71
CSPG4P12-201ENST00000558282 PYCR3Q53H96 274 aa10.59□□□□□ -0.71
CSPG4P12-201ENST00000558282 MARCH3Q86UD3 253 aa10.59□□□□□ -0.71
CSPG4P12-201ENST00000558282 OR10G3Q8NGC4 313 aa10.59□□□□□ -0.71
CSPG4P12-201ENST00000558282 C4BP0C0L5 1744 aa10.59□□□□□ -0.71
CSPG4P12-201ENST00000558282 NAV1Q8NEY1 1877 aa10.59□□□□□ -0.71
CSPG4P12-201ENST00000558282 GPR37O15354 613 aa10.59□□□□□ -0.71
CSPG4P12-201ENST00000558282 B3GALT4O96024 378 aa10.59□□□□□ -0.71
CSPG4P12-201ENST00000558282 GAPDHP04406 335 aaKnown RBP10.59□□□□□ -0.71
CSPG4P12-201ENST00000558282 CTSDP07339 412 aaPredicted RBP10.59□□□□□ -0.71
CSPG4P12-201ENST00000558282 FABP2P12104 132 aa10.59□□□□□ -0.71
CSPG4P12-201ENST00000558282 THBS4P35443 961 aa10.59□□□□□ -0.71
CSPG4P12-201ENST00000558282 CDC34P49427 236 aaPredicted RBP10.59□□□□□ -0.71
CSPG4P12-201ENST00000558282 NHLRC3Q5JS37 347 aa10.59□□□□□ -0.71
CSPG4P12-201ENST00000558282 ZNF660Q6AZW8 331 aaPredicted RBP10.59□□□□□ -0.71
CSPG4P12-201ENST00000558282 MSRB3Q8IXL7 192 aa10.59□□□□□ -0.71
CSPG4P12-201ENST00000558282 MRPS24Q96EL2 167 aaKnown RBP10.59□□□□□ -0.71
CSPG4P12-201ENST00000558282 SLC46A2Q9BY10 475 aa10.59□□□□□ -0.71
CSPG4P12-201ENST00000558282 PPP1R3CQ9UQK1 317 aa10.59□□□□□ -0.71
CSPG4P12-201ENST00000558282 DDX60Q8IY21 1712 aaKnown RBP10.59□□□□□ -0.71
CSPG4P12-201ENST00000558282 CYB5R3P00387 301 aaPredicted RBP10.59□□□□□ -0.71
CSPG4P12-201ENST00000558282 SRYQ05066 204 aa10.59□□□□□ -0.71
CSPG4P12-201ENST00000558282 PWWP2BQ6NUJ5 590 aa10.59□□□□□ -0.71
CSPG4P12-201ENST00000558282 JMJD6Q6NYC1 403 aaPredicted RBP10.59□□□□□ -0.71
CSPG4P12-201ENST00000558282 C8orf82Q6P1X6 216 aaPredicted RBP10.59□□□□□ -0.71
CSPG4P12-201ENST00000558282 OR11L1Q8NGX0 322 aa10.59□□□□□ -0.71
CSPG4P12-201ENST00000558282 STRADBQ9C0K7 418 aa10.59□□□□□ -0.71
CSPG4P12-201ENST00000558282 FAM234AQ9H0X4 552 aa10.59□□□□□ -0.71
CSPG4P12-201ENST00000558282 ASB1Q9Y576 335 aa10.59□□□□□ -0.71
CSPG4P12-201ENST00000558282 TMEM265A0A087WTH1 108 aa10.58□□□□□ -0.72
CSPG4P12-201ENST00000558282 MUC1P15941 1255 aaPredicted RBP10.58□□□□□ -0.72
CSPG4P12-201ENST00000558282 SRP14P37108 136 aaKnown RBP10.58□□□□□ -0.72
CSPG4P12-201ENST00000558282 DMKNQ6E0U4 476 aaPredicted RBP10.58□□□□□ -0.72
CSPG4P12-201ENST00000558282 SLC35E3Q7Z769 313 aa10.58□□□□□ -0.72
CSPG4P12-201ENST00000558282 OTOSQ8NHW6 89 aa10.58□□□□□ -0.72
CSPG4P12-201ENST00000558282 OIT3Q8WWZ8 545 aa10.58□□□□□ -0.72
CSPG4P12-201ENST00000558282 HHIPQ96QV1 700 aa10.58□□□□□ -0.72
CSPG4P12-201ENST00000558282 MSL2Q9HCI7 577 aa10.58□□□□□ -0.72
CSPG4P12-201ENST00000558282 TXNRD2Q9NNW7 524 aa10.58□□□□□ -0.72
CSPG4P12-201ENST00000558282 IFITM10A6NMD0 228 aa10.58□□□□□ -0.72
CSPG4P12-201ENST00000558282 RAB29O14966 203 aa10.58□□□□□ -0.72
CSPG4P12-201ENST00000558282 HTR1DP28221 377 aa10.58□□□□□ -0.72
CSPG4P12-201ENST00000558282 CCR2P41597 374 aa10.58□□□□□ -0.72
CSPG4P12-201ENST00000558282 ARRDC3Q96B67 414 aa10.58□□□□□ -0.72
CSPG4P12-201ENST00000558282 ORAI1Q96D31 301 aa10.58□□□□□ -0.72
CSPG4P12-201ENST00000558282 PDE6DO43924 150 aa10.58□□□□□ -0.72
CSPG4P12-201ENST00000558282 ERHP84090 104 aaKnown RBP10.58□□□□□ -0.72
CSPG4P12-201ENST00000558282 SKP2Q13309 424 aa10.58□□□□□ -0.72
CSPG4P12-201ENST00000558282 LTC4SQ16873 150 aa10.58□□□□□ -0.72
CSPG4P12-201ENST00000558282 MORN1Q5T089 497 aa10.58□□□□□ -0.72
CSPG4P12-201ENST00000558282 LAIR1Q6GTX8 287 aa10.58□□□□□ -0.72
CSPG4P12-201ENST00000558282 ADAMTSL4Q6UY14 1074 aa10.58□□□□□ -0.72
CSPG4P12-201ENST00000558282 TAS1R1Q7RTX1 841 aa10.58□□□□□ -0.72
CSPG4P12-201ENST00000558282 TSEN54Q7Z6J9 526 aaKnown RBP10.58□□□□□ -0.72
CSPG4P12-201ENST00000558282 MS4A6EQ96DS6 147 aa10.58□□□□□ -0.72
CSPG4P12-201ENST00000558282 HDAC8Q9BY41 377 aa10.58□□□□□ -0.72
CSPG4P12-201ENST00000558282 H3BP45 60 aa10.58□□□□□ -0.72
CSPG4P12-201ENST00000558282 PRKRAO75569 313 aaKnown RBP10.58□□□□□ -0.72
CSPG4P12-201ENST00000558282 CBR3O75828 277 aa10.58□□□□□ -0.72
CSPG4P12-201ENST00000558282 ZFPL1O95159 310 aa10.58□□□□□ -0.72
CSPG4P12-201ENST00000558282 MT-ND6P03923 174 aa10.58□□□□□ -0.72
CSPG4P12-201ENST00000558282 OR5G3P0C626 314 aa10.58□□□□□ -0.72
CSPG4P12-201ENST00000558282 P2RY2P41231 377 aa10.58□□□□□ -0.72
CSPG4P12-201ENST00000558282 SMAD2Q15796 467 aaKnown RBP10.58□□□□□ -0.72
CSPG4P12-201ENST00000558282 MAML2Q8IZL2 1156 aaPredicted RBP10.58□□□□□ -0.72
CSPG4P12-201ENST00000558282 C19orf47Q8N9M1 422 aaKnown RBP10.58□□□□□ -0.72
CSPG4P12-201ENST00000558282 OR10G4Q8NGN3 311 aa10.58□□□□□ -0.72
CSPG4P12-201ENST00000558282 OR10G9Q8NGN4 311 aa10.58□□□□□ -0.72
CSPG4P12-201ENST00000558282 OR10G7Q8NGN6 311 aa10.58□□□□□ -0.72
CSPG4P12-201ENST00000558282 LRFN3Q9BTN0 628 aa10.58□□□□□ -0.72
CSPG4P12-201ENST00000558282 RTL8AQ9BWD3 113 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms