RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 NPIPB8E9PQR5 432 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 NPIPB9F8W1W9 429 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 NPIPB7O75200 414 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 MAP1LC3CQ9BXW4 147 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 Q9Y3F1 56 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 ZC3H13Q5T200 1668 aaKnown RBP3.31□□□□□ -1.88
ATXN3-248ENST00000558190 TLCD2A6NGC4 264 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 C5orf52A6NGY3 159 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 WDR1O75083 606 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 SCGB2A1O75556 95 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 OR7C1O76099 320 aaPredicted RBP3.31□□□□□ -1.88
ATXN3-248ENST00000558190 CD99P14209 185 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 DYNLT3P51808 116 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 C2orf68Q2NKX9 166 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 GRASPQ7Z6J2 395 aaPredicted RBP3.31□□□□□ -1.88
ATXN3-248ENST00000558190 GJC3Q8NFK1 279 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 SNX22Q96L94 193 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 LHX9Q9NQ69 397 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 LOC102725191A0A1B0GVB3 256 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 OR2J3O76001 311 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 LILRA3Q8N6C8 439 aaPredicted RBP3.31□□□□□ -1.88
ATXN3-248ENST00000558190 WFIKKN1Q96NZ8 548 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 ALKBH7Q9BT30 221 aaPredicted RBP3.31□□□□□ -1.88
ATXN3-248ENST00000558190 SH2D2AQ9NP31 389 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 C1QL1O75973 258 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 CNIH1O95406 144 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 HKR1P10072 659 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 SUB1P53999 127 aaKnown RBP eCLIP3.31□□□□□ -1.88
ATXN3-248ENST00000558190 RPS4XP62701 263 aaKnown RBP3.31□□□□□ -1.88
ATXN3-248ENST00000558190 TIAL1Q01085 375 aaKnown RBP eCLIP3.31□□□□□ -1.88
ATXN3-248ENST00000558190 ADAT3Q96EY9 351 aaPredicted RBP3.31□□□□□ -1.88
ATXN3-248ENST00000558190 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.31□□□□□ -1.88
ATXN3-248ENST00000558190 NAT8Q9UHE5 227 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 GALR3O60755 368 aaPredicted RBP3.31□□□□□ -1.88
ATXN3-248ENST00000558190 OLFM2O95897 454 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 CDK5R1Q15078 307 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 TMEM59Q9BXS4 323 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 MARCH11A6NNE9 402 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 SNCGO76070 127 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 SNRPCP09234 159 aaKnown RBP3.31□□□□□ -1.88
ATXN3-248ENST00000558190 ZNF865P0CJ78 1059 aaPredicted RBP3.31□□□□□ -1.88
ATXN3-248ENST00000558190 PWWP2BQ6NUJ5 590 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 DOK3Q7L591 496 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 FBLIM1Q8WUP2 373 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 INSL5Q9Y5Q6 135 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 AGAP20933 346 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 RPS4Y1P22090 263 aaKnown RBP3.31□□□□□ -1.88
ATXN3-248ENST00000558190 DMWDQ09019 674 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 DUSP8Q13202 625 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 OR5C1Q8NGR4 320 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 TMEM208Q9BTX3 173 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 APOOQ9BUR5 198 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 TECRQ9NZ01 308 aaKnown RBP3.31□□□□□ -1.88
ATXN3-248ENST00000558190 SIRPB1O00241 398 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 SPATA45Q537H7 98 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 MRPL21Q7Z2W9 205 aaKnown RBP3.31□□□□□ -1.88
ATXN3-248ENST00000558190 ADPRHL1Q8NDY3 354 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 OR1P1Q8NH06 330 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 FRRS1LQ9P0K9 344 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 ATXN7O15265 892 aaPredicted RBP3.31□□□□□ -1.88
ATXN3-248ENST00000558190 ACRP10323 421 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 BRS3P32247 399 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 BCL2L2Q92843 193 aaPredicted RBP3.31□□□□□ -1.88
ATXN3-248ENST00000558190 LOC389332A0A1B0GUA5 103 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 OR5AL1P0C617 328 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 NUFIP2Q7Z417 695 aaKnown RBP3.31□□□□□ -1.88
ATXN3-248ENST00000558190 MRGPREQ86SM8 312 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 SLC26A10Q8NG04 563 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 WNT10AQ9GZT5 417 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 MN1Q10571 1320 aaPredicted RBP3.31□□□□□ -1.88
ATXN3-248ENST00000558190 OR1D4P47884 311 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 RELBQ01201 579 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 DUSP5Q16690 384 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 ZC3HAV1LQ96H79 300 aaKnown RBP3.31□□□□□ -1.88
ATXN3-248ENST00000558190 ATP6V0CP27449 155 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 DCAF7P61962 342 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 PIGTQ969N2 578 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 GUCD1Q96NT3 240 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 IGFBP4P22692 258 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 TIMM9Q9Y5J7 89 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 MYO5CQ9NQX4 1742 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 NKX6-3A6NJ46 265 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 H3BMH7 237 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 GYPAP02724 150 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 GNG4P50150 75 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 ERHP84090 104 aaKnown RBP3.31□□□□□ -1.88
ATXN3-248ENST00000558190 TRA2AQ13595 282 aaKnown RBP eCLIP3.31□□□□□ -1.88
ATXN3-248ENST00000558190 ERASQ7Z444 233 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 SLC25A38Q96DW6 304 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 OR2M5A3KFT3 312 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 CSN3P07498 182 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 BCL6P41182 706 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 AMTP48728 403 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 DCAF4L2Q8NA75 395 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 OR4C3Q8NH37 302 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 TNFSF18Q9UNG2 199 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 NSG1A0A0A6YYJ2 146 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 NPIPB15A6NHN6 443 aaPredicted RBP3.31□□□□□ -1.88
ATXN3-248ENST00000558190 HSPB6O14558 160 aa3.31□□□□□ -1.88
ATXN3-248ENST00000558190 IL24Q13007 206 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms