RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 ZNF404Q494X3 552 aa7.54□□□□□ -1.2
SPG11-207ENST00000558138 ZBTB37Q5TC79 503 aa7.54□□□□□ -1.2
SPG11-207ENST00000558138 TMEM244Q5VVB8 128 aa7.54□□□□□ -1.2
SPG11-207ENST00000558138 BTNL3Q6UXE8 466 aa7.54□□□□□ -1.2
SPG11-207ENST00000558138 DCDC5Q6ZRR9 648 aa7.54□□□□□ -1.2
SPG11-207ENST00000558138 AHSA2Q719I0 299 aa7.54□□□□□ -1.2
SPG11-207ENST00000558138 RDH10Q8IZV5 341 aa7.54□□□□□ -1.2
SPG11-207ENST00000558138 CCDC54Q8NEL0 328 aa7.54□□□□□ -1.2
SPG11-207ENST00000558138 BPIFB6Q8NFQ5 453 aa7.54□□□□□ -1.2
SPG11-207ENST00000558138 OR4M2Q8NGB6 313 aa7.54□□□□□ -1.2
SPG11-207ENST00000558138 OR2G2Q8NGZ5 317 aa7.54□□□□□ -1.2
SPG11-207ENST00000558138 ZNF671Q8TAW3 534 aa7.54□□□□□ -1.2
SPG11-207ENST00000558138 TSEN15Q8WW01 171 aaKnown RBP7.54□□□□□ -1.2
SPG11-207ENST00000558138 ITFG2Q969R8 447 aa7.54□□□□□ -1.2
SPG11-207ENST00000558138 ITPKCQ96DU7 683 aa7.54□□□□□ -1.2
SPG11-207ENST00000558138 NEIL1Q96FI4 390 aaPredicted RBP7.54□□□□□ -1.2
SPG11-207ENST00000558138 TMEM80Q96HE8 168 aa7.54□□□□□ -1.2
SPG11-207ENST00000558138 TMEM246Q9BRR3 403 aa7.54□□□□□ -1.2
SPG11-207ENST00000558138 MRI1Q9BV20 369 aa7.54□□□□□ -1.2
SPG11-207ENST00000558138 SSBP3Q9BWW4 388 aaPredicted RBP7.54□□□□□ -1.2
SPG11-207ENST00000558138 ISG20L2Q9H9L3 353 aaKnown RBP7.54□□□□□ -1.2
SPG11-207ENST00000558138 ERVK-18Q9QC07 812 aa7.54□□□□□ -1.2
SPG11-207ENST00000558138 CLN8Q9UBY8 286 aa7.54□□□□□ -1.2
SPG11-207ENST00000558138 EXOSC1Q9Y3B2 195 aaKnown RBP7.54□□□□□ -1.2
SPG11-207ENST00000558138 HSPE1-MOB4S4R3N1 261 aa7.54□□□□□ -1.2
SPG11-207ENST00000558138 V9GYS6 101 aa7.54□□□□□ -1.2
SPG11-207ENST00000558138 CSPG4Q6UVK1 2322 aa7.53□□□□□ -1.2
SPG11-207ENST00000558138 TRBV2A0A0J9YWF9 115 aa7.53□□□□□ -1.2
SPG11-207ENST00000558138 A0A1B0GWJ7 208 aa7.53□□□□□ -1.2
SPG11-207ENST00000558138 EFCAB10A6NFE3 127 aa7.53□□□□□ -1.2
SPG11-207ENST00000558138 E9PQ18 207 aa7.53□□□□□ -1.2
SPG11-207ENST00000558138 PHF1O43189 567 aaPredicted RBP7.53□□□□□ -1.2
SPG11-207ENST00000558138 AKR7A2O43488 359 aa7.53□□□□□ -1.2
SPG11-207ENST00000558138 WBP4O75554 376 aaKnown RBP7.53□□□□□ -1.2
SPG11-207ENST00000558138 PLATP00750 562 aa7.53□□□□□ -1.2
SPG11-207ENST00000558138 GNAO1P09471 354 aa7.53□□□□□ -1.2
SPG11-207ENST00000558138 GLRA1P23415 457 aa7.53□□□□□ -1.2
SPG11-207ENST00000558138 DCKP27707 260 aa7.53□□□□□ -1.2
SPG11-207ENST00000558138 KIR3DL2P43630 455 aa7.53□□□□□ -1.2
SPG11-207ENST00000558138 HAAOP46952 286 aa7.53□□□□□ -1.2
SPG11-207ENST00000558138 GABRA2P47869 451 aa7.53□□□□□ -1.2
SPG11-207ENST00000558138 SEC61A1P61619 476 aaKnown RBP7.53□□□□□ -1.2
SPG11-207ENST00000558138 ADARB1P78563 741 aaKnown RBP7.53□□□□□ -1.2
SPG11-207ENST00000558138 HOXA4Q00056 320 aaPredicted RBP7.53□□□□□ -1.2
SPG11-207ENST00000558138 ALKBH1Q13686 389 aaKnown RBP7.53□□□□□ -1.2
SPG11-207ENST00000558138 HAGHLQ6PII5 290 aaPredicted RBP7.53□□□□□ -1.2
SPG11-207ENST00000558138 IZUMO2Q6UXV1 221 aa7.53□□□□□ -1.2
SPG11-207ENST00000558138 WDR86Q86TI4 376 aa7.53□□□□□ -1.2
SPG11-207ENST00000558138 ZNF573Q86YE8 665 aa7.53□□□□□ -1.2
SPG11-207ENST00000558138 SYS1Q8N2H4 156 aa7.53□□□□□ -1.2
SPG11-207ENST00000558138 PRSS35Q8N3Z0 413 aa7.53□□□□□ -1.2
SPG11-207ENST00000558138 TEX29Q8N6K0 151 aa7.53□□□□□ -1.2
SPG11-207ENST00000558138 SCCPDHQ8NBX0 429 aa7.53□□□□□ -1.2
SPG11-207ENST00000558138 OR5A2Q8NGI9 324 aa7.53□□□□□ -1.2
SPG11-207ENST00000558138 OR14K1Q8NGZ2 314 aa7.53□□□□□ -1.2
SPG11-207ENST00000558138 OR5AK2Q8NH90 309 aa7.53□□□□□ -1.2
SPG11-207ENST00000558138 HAVCR2Q8TDQ0 301 aa7.53□□□□□ -1.2
SPG11-207ENST00000558138 HPSE2Q8WWQ2 592 aa7.53□□□□□ -1.2
SPG11-207ENST00000558138 ST8SIA4Q92187 359 aa7.53□□□□□ -1.2
SPG11-207ENST00000558138 BORCS8Q96FH0 119 aa7.53□□□□□ -1.2
SPG11-207ENST00000558138 TMEM165Q9HC07 324 aa7.53□□□□□ -1.2
SPG11-207ENST00000558138 NEK6Q9HC98 313 aa7.53□□□□□ -1.2
SPG11-207ENST00000558138 SNTG1Q9NSN8 517 aa7.53□□□□□ -1.2
SPG11-207ENST00000558138 TMEM160Q9NX00 188 aa7.53□□□□□ -1.2
SPG11-207ENST00000558138 SCN3BQ9NY72 215 aa7.53□□□□□ -1.2
SPG11-207ENST00000558138 HHLA2Q9UM44 414 aa7.53□□□□□ -1.2
SPG11-207ENST00000558138 DHDHQ9UQ10 334 aa7.53□□□□□ -1.2
SPG11-207ENST00000558138 LRCH1Q9Y2L9 728 aa7.53□□□□□ -1.2
SPG11-207ENST00000558138 POLDIP2Q9Y2S7 368 aa7.53□□□□□ -1.2
SPG11-207ENST00000558138 YLPM1P49750 1951 aaKnown RBP7.52□□□□□ -1.21
SPG11-207ENST00000558138 TMEM212A6NML5 194 aa7.52□□□□□ -1.21
SPG11-207ENST00000558138 DHRS7CA6NNS2 312 aa7.52□□□□□ -1.21
SPG11-207ENST00000558138 J3QRE1 110 aa7.52□□□□□ -1.21
SPG11-207ENST00000558138 TMPRSS2O15393 492 aa7.52□□□□□ -1.21
SPG11-207ENST00000558138 NDUFA2O43678 99 aa7.52□□□□□ -1.21
SPG11-207ENST00000558138 INMTO95050 263 aa7.52□□□□□ -1.21
SPG11-207ENST00000558138 ATP6V1G2O95670 118 aa7.52□□□□□ -1.21
SPG11-207ENST00000558138 CYB5AP00167 134 aa7.52□□□□□ -1.21
SPG11-207ENST00000558138 IGLV3-1P01715 115 aa7.52□□□□□ -1.21
SPG11-207ENST00000558138 IGHA1P01876 353 aa7.52□□□□□ -1.21
SPG11-207ENST00000558138 HOXB4P17483 251 aaPredicted RBP7.52□□□□□ -1.21
SPG11-207ENST00000558138 EGR1P18146 543 aa7.52□□□□□ -1.21
SPG11-207ENST00000558138 CCL1P22362 96 aa7.52□□□□□ -1.21
SPG11-207ENST00000558138 GATA3P23771 443 aa7.52□□□□□ -1.21
SPG11-207ENST00000558138 HSPA13P48723 471 aa7.52□□□□□ -1.21
SPG11-207ENST00000558138 ETV1P50549 477 aa7.52□□□□□ -1.21
SPG11-207ENST00000558138 CAPZA1P52907 286 aa7.52□□□□□ -1.21
SPG11-207ENST00000558138 ISL1P61371 349 aa7.52□□□□□ -1.21
SPG11-207ENST00000558138 SCGB2A2Q13296 93 aa7.52□□□□□ -1.21
SPG11-207ENST00000558138 IKZF1Q13422 519 aa7.52□□□□□ -1.21
SPG11-207ENST00000558138 ARMCX4Q5H9R4 360 aa7.52□□□□□ -1.21
SPG11-207ENST00000558138 LYPD2Q6UXB3 125 aa7.52□□□□□ -1.21
SPG11-207ENST00000558138 WDR82Q6UXN9 313 aa7.52□□□□□ -1.21
SPG11-207ENST00000558138 SLC36A1Q7Z2H8 476 aa7.52□□□□□ -1.21
SPG11-207ENST00000558138 BATF2Q8N1L9 274 aa7.52□□□□□ -1.21
SPG11-207ENST00000558138 GCSAMQ8N6F7 178 aa7.52□□□□□ -1.21
SPG11-207ENST00000558138 NRG4Q8WWG1 115 aa7.52□□□□□ -1.21
SPG11-207ENST00000558138 TMIGD2Q96BF3 282 aa7.52□□□□□ -1.21
SPG11-207ENST00000558138 FGGYQ96C11 551 aa7.52□□□□□ -1.21
SPG11-207ENST00000558138 PELI1Q96FA3 418 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms