RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 MAP2K3P46734 347 aa12.04□□□□□ -0.48
SHMT2-235ENST00000557740 TGM4P49221 684 aa12.04□□□□□ -0.48
SHMT2-235ENST00000557740 CBX1P83916 185 aa12.04□□□□□ -0.48
SHMT2-235ENST00000557740 CDK5Q00535 292 aa12.04□□□□□ -0.48
SHMT2-235ENST00000557740 APOFQ13790 326 aa12.04□□□□□ -0.48
SHMT2-235ENST00000557740 DNAL1Q4LDG9 190 aa12.04□□□□□ -0.48
SHMT2-235ENST00000557740 LCN1P1Q5VSP4 162 aa12.04□□□□□ -0.48
SHMT2-235ENST00000557740 KCTD18Q6PI47 426 aaPredicted RBP12.04□□□□□ -0.48
SHMT2-235ENST00000557740 METAP1DQ6UB28 335 aaPredicted RBP12.04□□□□□ -0.48
SHMT2-235ENST00000557740 PIP4P2Q8N4L2 257 aa12.04□□□□□ -0.48
SHMT2-235ENST00000557740 GAFA1Q96PS6 74 aa12.04□□□□□ -0.48
SHMT2-235ENST00000557740 YIPF3Q9GZM5 350 aa12.04□□□□□ -0.48
SHMT2-235ENST00000557740 SLC25A19Q9HC21 320 aa12.04□□□□□ -0.48
SHMT2-235ENST00000557740 NLKQ9UBE8 527 aa12.04□□□□□ -0.48
SHMT2-235ENST00000557740 DNAJB9Q9UBS3 223 aa12.04□□□□□ -0.48
SHMT2-235ENST00000557740 SLC25A10Q9UBX3 287 aaPredicted RBP12.04□□□□□ -0.48
SHMT2-235ENST00000557740 TRRAPQ9Y4A5 3859 aa12.03□□□□□ -0.48
SHMT2-235ENST00000557740 A0A0U1RQV5 110 aa12.03□□□□□ -0.48
SHMT2-235ENST00000557740 A0A1W2PQ09 198 aa12.03□□□□□ -0.48
SHMT2-235ENST00000557740 SIGLEC5O15389 551 aa12.03□□□□□ -0.48
SHMT2-235ENST00000557740 GYG2O15488 501 aa12.03□□□□□ -0.48
SHMT2-235ENST00000557740 KCNAB3O43448 404 aa12.03□□□□□ -0.48
SHMT2-235ENST00000557740 FKBP6O75344 327 aa12.03□□□□□ -0.48
SHMT2-235ENST00000557740 PAHP00439 452 aa12.03□□□□□ -0.48
SHMT2-235ENST00000557740 MRPL3P09001 348 aaKnown RBP12.03□□□□□ -0.48
SHMT2-235ENST00000557740 NDUFB7P17568 137 aa12.03□□□□□ -0.48
SHMT2-235ENST00000557740 AMY2BP19961 511 aa12.03□□□□□ -0.48
SHMT2-235ENST00000557740 SLC2A5P22732 501 aa12.03□□□□□ -0.48
SHMT2-235ENST00000557740 GLRA1P23415 457 aa12.03□□□□□ -0.48
SHMT2-235ENST00000557740 SRSF4Q08170 494 aaKnown RBP12.03□□□□□ -0.48
SHMT2-235ENST00000557740 SNAPC1Q16533 368 aa12.03□□□□□ -0.48
SHMT2-235ENST00000557740 ZNF829Q3KNS6 432 aaPredicted RBP12.03□□□□□ -0.48
SHMT2-235ENST00000557740 TMEM236Q5W0B7 351 aa12.03□□□□□ -0.48
SHMT2-235ENST00000557740 GDPGP1Q6ZNW5 385 aa12.03□□□□□ -0.48
SHMT2-235ENST00000557740 C8orf46Q8TAG6 207 aa12.03□□□□□ -0.48
SHMT2-235ENST00000557740 NPRL2Q8WTW4 380 aa12.03□□□□□ -0.48
SHMT2-235ENST00000557740 DNAJC9Q8WXX5 260 aa12.03□□□□□ -0.48
SHMT2-235ENST00000557740 MROQ9BYG7 248 aa12.03□□□□□ -0.48
SHMT2-235ENST00000557740 FGF23Q9GZV9 251 aaPredicted RBP12.03□□□□□ -0.48
SHMT2-235ENST00000557740 SEMA6AQ9H2E6 1030 aa12.03□□□□□ -0.48
SHMT2-235ENST00000557740 FAM206AQ9NX38 181 aa12.03□□□□□ -0.48
SHMT2-235ENST00000557740 TVP23BQ9NYZ1 205 aa12.03□□□□□ -0.48
SHMT2-235ENST00000557740 RNF114Q9Y508 228 aa12.03□□□□□ -0.48
SHMT2-235ENST00000557740 TMEM269A0A1B0GVZ9 245 aa12.02□□□□□ -0.49
SHMT2-235ENST00000557740 A0A1W2PRD5 423 aa12.02□□□□□ -0.49
SHMT2-235ENST00000557740 A0A1W2PRF3 423 aa12.02□□□□□ -0.49
SHMT2-235ENST00000557740 A0A1W2PRM7 423 aa12.02□□□□□ -0.49
SHMT2-235ENST00000557740 ACOD1A6NK06 481 aa12.02□□□□□ -0.49
SHMT2-235ENST00000557740 OR2AT4A6NND4 320 aa12.02□□□□□ -0.49
SHMT2-235ENST00000557740 M0QZ24 198 aa12.02□□□□□ -0.49
SHMT2-235ENST00000557740 PSMD9O00233 223 aa12.02□□□□□ -0.49
SHMT2-235ENST00000557740 NPFFO15130 113 aa12.02□□□□□ -0.49
SHMT2-235ENST00000557740 TFF1P04155 84 aa12.02□□□□□ -0.49
SHMT2-235ENST00000557740 DCTDP32321 178 aa12.02□□□□□ -0.49
SHMT2-235ENST00000557740 GABRA2P47869 451 aa12.02□□□□□ -0.49
SHMT2-235ENST00000557740 HCCSP53701 268 aa12.02□□□□□ -0.49
SHMT2-235ENST00000557740 GNG3P63215 75 aa12.02□□□□□ -0.49
SHMT2-235ENST00000557740 PRB3Q04118 309 aaPredicted RBP12.02□□□□□ -0.49
SHMT2-235ENST00000557740 KLRD1Q13241 179 aa12.02□□□□□ -0.49
SHMT2-235ENST00000557740 BLMHQ13867 455 aa12.02□□□□□ -0.49
SHMT2-235ENST00000557740 DGUOKQ16854 277 aa12.02□□□□□ -0.49
SHMT2-235ENST00000557740 FAM76BQ5HYJ3 339 aa12.02□□□□□ -0.49
SHMT2-235ENST00000557740 CEP78Q5JTW2 689 aa12.02□□□□□ -0.49
SHMT2-235ENST00000557740 NCR3LG1Q68D85 454 aa12.02□□□□□ -0.49
SHMT2-235ENST00000557740 DHRS7BQ6IAN0 325 aaPredicted RBP12.02□□□□□ -0.49
SHMT2-235ENST00000557740 DEGS2Q6QHC5 323 aa12.02□□□□□ -0.49
SHMT2-235ENST00000557740 ZNF788Q6ZQV5 615 aa12.02□□□□□ -0.49
SHMT2-235ENST00000557740 THAP5Q7Z6K1 395 aa12.02□□□□□ -0.49
SHMT2-235ENST00000557740 TMEM185AQ8NFB2 350 aa12.02□□□□□ -0.49
SHMT2-235ENST00000557740 ANGPTL6Q8NI99 470 aa12.02□□□□□ -0.49
SHMT2-235ENST00000557740 ASB17Q8WXJ9 295 aa12.02□□□□□ -0.49
SHMT2-235ENST00000557740 CITED1Q99966 193 aa12.02□□□□□ -0.49
SHMT2-235ENST00000557740 PRRG3Q9BZD7 231 aa12.02□□□□□ -0.49
SHMT2-235ENST00000557740 PBOV1Q9GZY1 135 aa12.02□□□□□ -0.49
SHMT2-235ENST00000557740 METTL8Q9H825 291 aaKnown RBP12.02□□□□□ -0.49
SHMT2-235ENST00000557740 PAPOLBQ9NRJ5 636 aaKnown RBP12.02□□□□□ -0.49
SHMT2-235ENST00000557740 ZNRD1Q9P1U0 126 aa12.02□□□□□ -0.49
SHMT2-235ENST00000557740 VPREB3Q9UKI3 123 aa12.02□□□□□ -0.49
SHMT2-235ENST00000557740 IKZF2Q9UKS7 526 aa12.02□□□□□ -0.49
SHMT2-235ENST00000557740 TMEM14AQ9Y6G1 99 aa12.02□□□□□ -0.49
SHMT2-235ENST00000557740 OR5B21A6NL26 309 aa12.01□□□□□ -0.49
SHMT2-235ENST00000557740 ZNF732B4DXR9 585 aa12.01□□□□□ -0.49
SHMT2-235ENST00000557740 RNASEK-C17orf49H0YIS7 233 aa12.01□□□□□ -0.49
SHMT2-235ENST00000557740 M0R1W7 72 aa12.01□□□□□ -0.49
SHMT2-235ENST00000557740 TIMM23O14925 209 aa12.01□□□□□ -0.49
SHMT2-235ENST00000557740 GSC2O15499 205 aa12.01□□□□□ -0.49
SHMT2-235ENST00000557740 RHBDL1O75783 438 aa12.01□□□□□ -0.49
SHMT2-235ENST00000557740 ACAA1P09110 424 aaPredicted RBP12.01□□□□□ -0.49
SHMT2-235ENST00000557740 ATP6V1B1P15313 513 aa12.01□□□□□ -0.49
SHMT2-235ENST00000557740 RIDAP52758 137 aaKnown RBP12.01□□□□□ -0.49
SHMT2-235ENST00000557740 CAV3P56539 151 aa12.01□□□□□ -0.49
SHMT2-235ENST00000557740 CEACAM21Q3KPI0 293 aa12.01□□□□□ -0.49
SHMT2-235ENST00000557740 PLCXD3Q63HM9 321 aa12.01□□□□□ -0.49
SHMT2-235ENST00000557740 TRPM8Q7Z2W7 1104 aa12.01□□□□□ -0.49
SHMT2-235ENST00000557740 Q8N7P7 452 aa12.01□□□□□ -0.49
SHMT2-235ENST00000557740 LINC01006Q8NI28 216 aa12.01□□□□□ -0.49
SHMT2-235ENST00000557740 ZNF671Q8TAW3 534 aa12.01□□□□□ -0.49
SHMT2-235ENST00000557740 OR51E1Q8TCB6 317 aa12.01□□□□□ -0.49
SHMT2-235ENST00000557740 ITFG2Q969R8 447 aa12.01□□□□□ -0.49
SHMT2-235ENST00000557740 CNN2Q99439 309 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms