RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 WBP4O75554 376 aaKnown RBP10.45□□□□□ -0.74
SLIRP-209ENST00000557342 CLIC3O95833 236 aa10.45□□□□□ -0.74
SLIRP-209ENST00000557342 RPSAP08865 295 aaKnown RBP10.45□□□□□ -0.74
SLIRP-209ENST00000557342 HTR1AP08908 422 aa10.45□□□□□ -0.74
SLIRP-209ENST00000557342 ZNF19P17023 458 aa10.45□□□□□ -0.74
SLIRP-209ENST00000557342 THBS2P35442 1172 aa10.45□□□□□ -0.74
SLIRP-209ENST00000557342 SRP14P37108 136 aaKnown RBP10.45□□□□□ -0.74
SLIRP-209ENST00000557342 VHLP40337 213 aa10.45□□□□□ -0.74
SLIRP-209ENST00000557342 GPM6AP51674 278 aa10.45□□□□□ -0.74
SLIRP-209ENST00000557342 OR12D2P58182 307 aa10.45□□□□□ -0.74
SLIRP-209ENST00000557342 GNB2P62879 340 aa10.45□□□□□ -0.74
SLIRP-209ENST00000557342 LCN2P80188 198 aa10.45□□□□□ -0.74
SLIRP-209ENST00000557342 WDR38Q5JTN6 314 aa10.45□□□□□ -0.74
SLIRP-209ENST00000557342 CEP78Q5JTW2 689 aa10.45□□□□□ -0.74
SLIRP-209ENST00000557342 TMEM244Q5VVB8 128 aa10.45□□□□□ -0.74
SLIRP-209ENST00000557342 PLCXD3Q63HM9 321 aa10.45□□□□□ -0.74
SLIRP-209ENST00000557342 SFRP4Q6FHJ7 346 aaPredicted RBP10.45□□□□□ -0.74
SLIRP-209ENST00000557342 FAHD2BQ6P2I3 314 aaPredicted RBP10.45□□□□□ -0.74
SLIRP-209ENST00000557342 WDR82Q6UXN9 313 aa10.45□□□□□ -0.74
SLIRP-209ENST00000557342 PRSS35Q8N3Z0 413 aa10.45□□□□□ -0.74
SLIRP-209ENST00000557342 GCSAMQ8N6F7 178 aa10.45□□□□□ -0.74
SLIRP-209ENST00000557342 DEFB108BQ8NET1 73 aa10.45□□□□□ -0.74
SLIRP-209ENST00000557342 OR52I1Q8NGK6 324 aa10.45□□□□□ -0.74
SLIRP-209ENST00000557342 OR2G2Q8NGZ5 317 aa10.45□□□□□ -0.74
SLIRP-209ENST00000557342 NRG4Q8WWG1 115 aa10.45□□□□□ -0.74
SLIRP-209ENST00000557342 HPSE2Q8WWQ2 592 aa10.45□□□□□ -0.74
SLIRP-209ENST00000557342 C10orf35Q96D05 121 aa10.45□□□□□ -0.74
SLIRP-209ENST00000557342 FAHD2AQ96GK7 314 aa10.45□□□□□ -0.74
SLIRP-209ENST00000557342 C4orf36Q96KX1 117 aa10.45□□□□□ -0.74
SLIRP-209ENST00000557342 SSBP3Q9BWW4 388 aaPredicted RBP10.45□□□□□ -0.74
SLIRP-209ENST00000557342 PLEKHA1Q9HB21 404 aa10.45□□□□□ -0.74
SLIRP-209ENST00000557342 FGF20Q9NP95 211 aaPredicted RBP10.45□□□□□ -0.74
SLIRP-209ENST00000557342 ERVK13-1Q9NX77 482 aa10.45□□□□□ -0.74
SLIRP-209ENST00000557342 ZNF732B4DXR9 585 aa10.44□□□□□ -0.74
SLIRP-209ENST00000557342 C3orf80F5H4A9 247 aa10.44□□□□□ -0.74
SLIRP-209ENST00000557342 CDIPTO14735 213 aa10.44□□□□□ -0.74
SLIRP-209ENST00000557342 ISG15P05161 165 aa10.44□□□□□ -0.74
SLIRP-209ENST00000557342 MUC1P15941 1255 aaPredicted RBP10.44□□□□□ -0.74
SLIRP-209ENST00000557342 DCKP27707 260 aa10.44□□□□□ -0.74
SLIRP-209ENST00000557342 CD80P33681 288 aa10.44□□□□□ -0.74
SLIRP-209ENST00000557342 PSMB10P40306 273 aa10.44□□□□□ -0.74
SLIRP-209ENST00000557342 NPY4RP50391 375 aa10.44□□□□□ -0.74
SLIRP-209ENST00000557342 CCR9P51686 369 aa10.44□□□□□ -0.74
SLIRP-209ENST00000557342 CSNK2BP67870 215 aa10.44□□□□□ -0.74
SLIRP-209ENST00000557342 MICBQ29980 383 aa10.44□□□□□ -0.74
SLIRP-209ENST00000557342 ODF4Q2M2E3 257 aa10.44□□□□□ -0.74
SLIRP-209ENST00000557342 TEX36Q5VZQ5 186 aa10.44□□□□□ -0.74
SLIRP-209ENST00000557342 TMEM42Q69YG0 159 aa10.44□□□□□ -0.74
SLIRP-209ENST00000557342 IL17RELQ6ZVW7 336 aa10.44□□□□□ -0.74
SLIRP-209ENST00000557342 LHFPL3Q86UP9 236 aa10.44□□□□□ -0.74
SLIRP-209ENST00000557342 C8orf59Q8N0T1 100 aaPredicted RBP10.44□□□□□ -0.74
SLIRP-209ENST00000557342 SCCPDHQ8NBX0 429 aa10.44□□□□□ -0.74
SLIRP-209ENST00000557342 C19orf18Q8NEA5 215 aa10.44□□□□□ -0.74
SLIRP-209ENST00000557342 ZNF671Q8TAW3 534 aa10.44□□□□□ -0.74
SLIRP-209ENST00000557342 CNIH3Q8TBE1 160 aa10.44□□□□□ -0.74
SLIRP-209ENST00000557342 RPL3LQ92901 407 aaKnown RBP10.44□□□□□ -0.74
SLIRP-209ENST00000557342 TECTBQ96PL2 329 aa10.44□□□□□ -0.74
SLIRP-209ENST00000557342 JAM3Q9BX67 310 aa10.44□□□□□ -0.74
SLIRP-209ENST00000557342 OR51I2Q9H344 312 aa10.44□□□□□ -0.74
SLIRP-209ENST00000557342 METTL17Q9H7H0 456 aaPredicted RBP10.44□□□□□ -0.74
SLIRP-209ENST00000557342 ERVK-18Q9QC07 812 aa10.44□□□□□ -0.74
SLIRP-209ENST00000557342 OR5V1Q9UGF6 321 aa10.44□□□□□ -0.74
SLIRP-209ENST00000557342 MYRFQ9Y2G1 1151 aa10.44□□□□□ -0.74
SLIRP-209ENST00000557342 SONP18583 2426 aaKnown RBP10.43□□□□□ -0.74
SLIRP-209ENST00000557342 LOC107986453A0A1B0GWG9 222 aa10.43□□□□□ -0.74
SLIRP-209ENST00000557342 SRRM5B3KS81 715 aa10.43□□□□□ -0.74
SLIRP-209ENST00000557342 GATBO75879 557 aaKnown RBP10.43□□□□□ -0.74
SLIRP-209ENST00000557342 SERPINA3P01011 423 aa10.43□□□□□ -0.74
SLIRP-209ENST00000557342 EGR1P18146 543 aa10.43□□□□□ -0.74
SLIRP-209ENST00000557342 ZFP36P26651 326 aaKnown RBP10.43□□□□□ -0.74
SLIRP-209ENST00000557342 KIR3DL2P43630 455 aa10.43□□□□□ -0.74
SLIRP-209ENST00000557342 PITPNBP48739 271 aa10.43□□□□□ -0.74
SLIRP-209ENST00000557342 GBX2P52951 348 aaPredicted RBP10.43□□□□□ -0.74
SLIRP-209ENST00000557342 SEC61A1P61619 476 aaKnown RBP10.43□□□□□ -0.74
SLIRP-209ENST00000557342 SCGB2A2Q13296 93 aa10.43□□□□□ -0.74
SLIRP-209ENST00000557342 MED21Q13503 144 aa10.43□□□□□ -0.74
SLIRP-209ENST00000557342 ALKBH1Q13686 389 aaKnown RBP10.43□□□□□ -0.74
SLIRP-209ENST00000557342 SMN1Q16637 294 aaKnown RBP10.43□□□□□ -0.74
SLIRP-209ENST00000557342 ZNF573Q86YE8 665 aa10.43□□□□□ -0.74
SLIRP-209ENST00000557342 C12orf43Q96C57 262 aaKnown RBP10.43□□□□□ -0.74
SLIRP-209ENST00000557342 PELI1Q96FA3 418 aa10.43□□□□□ -0.74
SLIRP-209ENST00000557342 FGF23Q9GZV9 251 aaPredicted RBP10.43□□□□□ -0.74
SLIRP-209ENST00000557342 C7orf69Q9H7B7 122 aa10.43□□□□□ -0.74
SLIRP-209ENST00000557342 GPR173Q9NS66 373 aa10.43□□□□□ -0.74
SLIRP-209ENST00000557342 FRRS1LQ9P0K9 344 aa10.43□□□□□ -0.74
SLIRP-209ENST00000557342 CLN8Q9UBY8 286 aa10.43□□□□□ -0.74
SLIRP-209ENST00000557342 SLC7A11Q9UPY5 501 aa10.43□□□□□ -0.74
SLIRP-209ENST00000557342 ZFHX3Q15911 3703 aa10.43□□□□□ -0.74
SLIRP-209ENST00000557342 WNK2Q9Y3S1 2297 aa10.42□□□□□ -0.74
SLIRP-209ENST00000557342 SETD2Q9BYW2 2564 aaPredicted RBP10.42□□□□□ -0.74
SLIRP-209ENST00000557342 ANKRD61A6NGH8 418 aa10.42□□□□□ -0.74
SLIRP-209ENST00000557342 KIAA1324LA8MWY0 1029 aaPredicted RBP10.42□□□□□ -0.74
SLIRP-209ENST00000557342 H0YJX3 145 aa10.42□□□□□ -0.74
SLIRP-209ENST00000557342 PHF1O43189 567 aaPredicted RBP10.42□□□□□ -0.74
SLIRP-209ENST00000557342 ADAM20O43506 726 aa10.42□□□□□ -0.74
SLIRP-209ENST00000557342 GYPAP02724 150 aa10.42□□□□□ -0.74
SLIRP-209ENST00000557342 CCDC159P0C7I6 412 aa10.42□□□□□ -0.74
SLIRP-209ENST00000557342 MYL12AP19105 171 aa10.42□□□□□ -0.74
SLIRP-209ENST00000557342 CD276Q5ZPR3 534 aa10.42□□□□□ -0.74
SLIRP-209ENST00000557342 LYPD2Q6UXB3 125 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms