RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 PECRQ9BY49 303 aa10.02□□□□□ -0.81
SRP54-213ENST00000556994 ALKBH4Q9NXW9 302 aa10.02□□□□□ -0.81
SRP54-213ENST00000556994 CABIN1Q9Y6J0 2220 aa10.02□□□□□ -0.81
SRP54-213ENST00000556994 ABCA7Q8IZY2 2146 aa10.02□□□□□ -0.81
SRP54-213ENST00000556994 ADAMTS9Q9P2N4 1935 aa10.01□□□□□ -0.81
SRP54-213ENST00000556994 MED19A0JLT2 244 aaPredicted RBP10.01□□□□□ -0.81
SRP54-213ENST00000556994 FAM157AC9JC47 383 aa10.01□□□□□ -0.81
SRP54-213ENST00000556994 NME2P1O60361 137 aa10.01□□□□□ -0.81
SRP54-213ENST00000556994 CST4P01036 141 aa10.01□□□□□ -0.81
SRP54-213ENST00000556994 IFNA2P01563 188 aa10.01□□□□□ -0.81
SRP54-213ENST00000556994 QDPRP09417 244 aa10.01□□□□□ -0.81
SRP54-213ENST00000556994 GLI4P10075 376 aa10.01□□□□□ -0.81
SRP54-213ENST00000556994 CD38P28907 300 aa10.01□□□□□ -0.81
SRP54-213ENST00000556994 SFTPDP35247 375 aa10.01□□□□□ -0.81
SRP54-213ENST00000556994 RBMXP38159 391 aaKnown RBP10.01□□□□□ -0.81
SRP54-213ENST00000556994 RAB5BP61020 215 aa10.01□□□□□ -0.81
SRP54-213ENST00000556994 TMEM268Q5VZI3 342 aa10.01□□□□□ -0.81
SRP54-213ENST00000556994 EIF5AL1Q6IS14 154 aaKnown RBP10.01□□□□□ -0.81
SRP54-213ENST00000556994 CRIP3Q6Q6R5 217 aa10.01□□□□□ -0.81
SRP54-213ENST00000556994 C6orf201Q7Z4U5 140 aa10.01□□□□□ -0.81
SRP54-213ENST00000556994 SKA3Q8IX90 412 aa10.01□□□□□ -0.81
SRP54-213ENST00000556994 NOXO1Q8NFA2 376 aa10.01□□□□□ -0.81
SRP54-213ENST00000556994 SEMA6DQ8NFY4 1073 aa10.01□□□□□ -0.81
SRP54-213ENST00000556994 ERGIC1Q969X5 290 aa10.01□□□□□ -0.81
SRP54-213ENST00000556994 OR5B2Q96R09 309 aa10.01□□□□□ -0.81
SRP54-213ENST00000556994 ZNF2Q9BSG1 426 aaPredicted RBP10.01□□□□□ -0.81
SRP54-213ENST00000556994 UCK1Q9HA47 277 aa10.01□□□□□ -0.81
SRP54-213ENST00000556994 PNRC2Q9NPJ4 139 aaKnown RBP10.01□□□□□ -0.81
SRP54-213ENST00000556994 SMCO4Q9NRQ5 59 aa10.01□□□□□ -0.81
SRP54-213ENST00000556994 KLHL13Q9P2N7 655 aa10.01□□□□□ -0.81
SRP54-213ENST00000556994 CACFD1Q9UGQ2 172 aa10.01□□□□□ -0.81
SRP54-213ENST00000556994 MCTS1Q9ULC4 181 aaKnown RBP10.01□□□□□ -0.81
SRP54-213ENST00000556994 C14orf166Q9Y224 244 aaKnown RBP10.01□□□□□ -0.81
SRP54-213ENST00000556994 COL5A1P20908 1838 aaPredicted RBP10.01□□□□□ -0.81
SRP54-213ENST00000556994 SPAG17Q6Q759 2223 aa10.01□□□□□ -0.81
SRP54-213ENST00000556994 A0A1B0GX78 115 aa10.01□□□□□ -0.81
SRP54-213ENST00000556994 A0A1W2PPE3 182 aa10.01□□□□□ -0.81
SRP54-213ENST00000556994 NPIPB13A6NJU9 1138 aa10.01□□□□□ -0.81
SRP54-213ENST00000556994 DHRS7CA6NNS2 312 aa10.01□□□□□ -0.81
SRP54-213ENST00000556994 NPIPB4C9JG80 1138 aa10.01□□□□□ -0.81
SRP54-213ENST00000556994 F5H5K5 113 aa10.01□□□□□ -0.81
SRP54-213ENST00000556994 IGHG1P01857 330 aa10.01□□□□□ -0.81
SRP54-213ENST00000556994 ZNF44P15621 663 aa10.01□□□□□ -0.81
SRP54-213ENST00000556994 GABRR1P24046 479 aa10.01□□□□□ -0.81
SRP54-213ENST00000556994 FHITP49789 147 aa10.01□□□□□ -0.81
SRP54-213ENST00000556994 DVL1P1P54792 670 aaPredicted RBP10.01□□□□□ -0.81
SRP54-213ENST00000556994 TAS2R46P59540 309 aa10.01□□□□□ -0.81
SRP54-213ENST00000556994 SMAD4Q13485 552 aaKnown RBP10.01□□□□□ -0.81
SRP54-213ENST00000556994 SP6Q3SY56 376 aa10.01□□□□□ -0.81
SRP54-213ENST00000556994 C14orf28Q4W4Y0 310 aa10.01□□□□□ -0.81
SRP54-213ENST00000556994 OR14K1Q8NGZ2 314 aa10.01□□□□□ -0.81
SRP54-213ENST00000556994 OR6S1Q8NH40 331 aa10.01□□□□□ -0.81
SRP54-213ENST00000556994 POC1BQ8TC44 478 aa10.01□□□□□ -0.81
SRP54-213ENST00000556994 EMG1Q92979 244 aaKnown RBP10.01□□□□□ -0.81
SRP54-213ENST00000556994 HIST1H2BAQ96A08 127 aa10.01□□□□□ -0.81
SRP54-213ENST00000556994 MRPL24Q96A35 216 aaKnown RBP10.01□□□□□ -0.81
SRP54-213ENST00000556994 LYZL4Q96KX0 146 aa10.01□□□□□ -0.81
SRP54-213ENST00000556994 IP6K3Q96PC2 410 aa10.01□□□□□ -0.81
SRP54-213ENST00000556994 C8orf33Q9H7E9 229 aaPredicted RBP10.01□□□□□ -0.81
SRP54-213ENST00000556994 C1orf123Q9NWV4 160 aa10.01□□□□□ -0.81
SRP54-213ENST00000556994 AMDHD2Q9Y303 409 aa10.01□□□□□ -0.81
SRP54-213ENST00000556994 FIGNL2A6NMB9 653 aa10□□□□□ -0.81
SRP54-213ENST00000556994 TAAR5O14804 337 aa10□□□□□ -0.81
SRP54-213ENST00000556994 SGCEO43556 437 aa10□□□□□ -0.81
SRP54-213ENST00000556994 IFNA4P05014 189 aa10□□□□□ -0.81
SRP54-213ENST00000556994 ZNF806P0C7X5 589 aa10□□□□□ -0.81
SRP54-213ENST00000556994 FCGR2AP12318 317 aa10□□□□□ -0.81
SRP54-213ENST00000556994 FAHP16930 419 aa10□□□□□ -0.81
SRP54-213ENST00000556994 PTAFRP25105 342 aa10□□□□□ -0.81
SRP54-213ENST00000556994 ZNF41P51814 821 aaPredicted RBP10□□□□□ -0.81
SRP54-213ENST00000556994 EIF5AP63241 154 aaKnown RBP10□□□□□ -0.81
SRP54-213ENST00000556994 HGFACQ04756 655 aa10□□□□□ -0.81
SRP54-213ENST00000556994 SMCO1Q147U7 214 aa10□□□□□ -0.81
SRP54-213ENST00000556994 UBE2V2Q15819 145 aa10□□□□□ -0.81
SRP54-213ENST00000556994 FAM69BQ5VUD6 431 aa10□□□□□ -0.81
SRP54-213ENST00000556994 CDCP2Q5VXM1 449 aa10□□□□□ -0.81
SRP54-213ENST00000556994 DOK3Q7L591 496 aa10□□□□□ -0.81
SRP54-213ENST00000556994 FAM89BQ8N5H3 189 aa10□□□□□ -0.81
SRP54-213ENST00000556994 STT3BQ8TCJ2 826 aa10□□□□□ -0.81
SRP54-213ENST00000556994 PIGTQ969N2 578 aa10□□□□□ -0.81
SRP54-213ENST00000556994 MOB1AQ9H8S9 216 aa10□□□□□ -0.81
SRP54-213ENST00000556994 PARP11Q9NR21 331 aa10□□□□□ -0.81
SRP54-213ENST00000556994 PPP4R1LQ9P1A2 415 aa10□□□□□ -0.81
SRP54-213ENST00000556994 MEMO1Q9Y316 297 aa10□□□□□ -0.81
SRP54-213ENST00000556994 IGHV1OR21-1A0A087WYE8 117 aa10□□□□□ -0.81
SRP54-213ENST00000556994 A0A1B0GV50 99 aa10□□□□□ -0.81
SRP54-213ENST00000556994 C1orf196B1AJZ1 125 aa10□□□□□ -0.81
SRP54-213ENST00000556994 LINC00587B1AMM8 73 aa10□□□□□ -0.81
SRP54-213ENST00000556994 TRAF3IP2O43734 574 aaPredicted RBP10□□□□□ -0.81
SRP54-213ENST00000556994 IGLV3-19P01714 112 aa10□□□□□ -0.81
SRP54-213ENST00000556994 RRADP55042 308 aa10□□□□□ -0.81
SRP54-213ENST00000556994 ZNF616Q08AN1 781 aa10□□□□□ -0.81
SRP54-213ENST00000556994 ECH1Q13011 328 aa10□□□□□ -0.81
SRP54-213ENST00000556994 MIDNQ504T8 468 aa10□□□□□ -0.81
SRP54-213ENST00000556994 KRBOX4Q5JUW0 171 aa10□□□□□ -0.81
SRP54-213ENST00000556994 GGNBP1Q5YKI7 109 aa10□□□□□ -0.81
SRP54-213ENST00000556994 ZC3HAV1Q7Z2W4 902 aaKnown RBP10□□□□□ -0.81
SRP54-213ENST00000556994 C17orf82Q86X59 251 aaPredicted RBP10□□□□□ -0.81
SRP54-213ENST00000556994 FNDC9Q8TBE3 224 aa10□□□□□ -0.81
SRP54-213ENST00000556994 SSC4DQ8WTU2 575 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms