RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 ZNF846Q147U1 533 aa20.33■□□□□ 0.84
SIX4-203ENST00000556952 UBE2NLQ5JXB2 153 aa20.33■□□□□ 0.84
SIX4-203ENST00000556952 BHLHE23Q8NDY6 225 aa20.33■□□□□ 0.84
SIX4-203ENST00000556952 OR4D6Q8NGJ1 314 aa20.33■□□□□ 0.84
SIX4-203ENST00000556952 OR5H6Q8NGV6 325 aa20.33■□□□□ 0.84
SIX4-203ENST00000556952 NPRL2Q8WTW4 380 aa20.33■□□□□ 0.84
SIX4-203ENST00000556952 FAM3DQ96BQ1 224 aa20.33■□□□□ 0.84
SIX4-203ENST00000556952 BORCS8Q96FH0 119 aa20.33■□□□□ 0.84
SIX4-203ENST00000556952 GPR160Q9UJ42 338 aa20.33■□□□□ 0.84
SIX4-203ENST00000556952 ANKHD1Q8IWZ3 2542 aaKnown RBP20.32■□□□□ 0.84
SIX4-203ENST00000556952 LOC100289279A0A1B0GTE1 492 aa20.32■□□□□ 0.84
SIX4-203ENST00000556952 APOA1P02647 267 aa20.32■□□□□ 0.84
SIX4-203ENST00000556952 RBP2P50120 134 aa20.32■□□□□ 0.84
SIX4-203ENST00000556952 ZNF45Q02386 682 aa20.32■□□□□ 0.84
SIX4-203ENST00000556952 P2RY14Q15391 338 aa20.32■□□□□ 0.84
SIX4-203ENST00000556952 CEACAM21Q3KPI0 293 aa20.32■□□□□ 0.84
SIX4-203ENST00000556952 PIAS4Q8N2W9 510 aaPredicted RBP20.32■□□□□ 0.84
SIX4-203ENST00000556952 MFSD4AQ8N468 514 aa20.32■□□□□ 0.84
SIX4-203ENST00000556952 ACBD4Q8NC06 268 aa20.32■□□□□ 0.84
SIX4-203ENST00000556952 RADILQ96JH8 1075 aa20.32■□□□□ 0.84
SIX4-203ENST00000556952 SPACA5Q96QH8 159 aa20.32■□□□□ 0.84
SIX4-203ENST00000556952 CXorf56Q9H5V9 222 aa20.32■□□□□ 0.84
SIX4-203ENST00000556952 PURGQ9UJV8 347 aaKnown RBP20.32■□□□□ 0.84
SIX4-203ENST00000556952 UNC79Q9P2D8 2635 aa20.32■□□□□ 0.84
SIX4-203ENST00000556952 ABCD4O14678 606 aa20.31■□□□□ 0.84
SIX4-203ENST00000556952 ZNF250P15622 560 aa20.31■□□□□ 0.84
SIX4-203ENST00000556952 ARSBP15848 533 aa20.31■□□□□ 0.84
SIX4-203ENST00000556952 POU3F4P49335 361 aa20.31■□□□□ 0.84
SIX4-203ENST00000556952 ZNF787Q6DD87 383 aa20.31■□□□□ 0.84
SIX4-203ENST00000556952 OR51D1Q8NGF3 324 aa20.31■□□□□ 0.84
SIX4-203ENST00000556952 DIRAS2Q96HU8 199 aa20.31■□□□□ 0.84
SIX4-203ENST00000556952 CRIM1Q9NZV1 1036 aa20.31■□□□□ 0.84
SIX4-203ENST00000556952 TUBAL3A6NHL2 446 aa20.3■□□□□ 0.84
SIX4-203ENST00000556952 BPNT1O95861 308 aa20.3■□□□□ 0.84
SIX4-203ENST00000556952 PEX19P40855 299 aa20.3■□□□□ 0.84
SIX4-203ENST00000556952 MTCP1P56278 107 aa20.3■□□□□ 0.84
SIX4-203ENST00000556952 NCMAPQ5T1S8 102 aa20.3■□□□□ 0.84
SIX4-203ENST00000556952 AWAT2Q6E213 333 aa20.3■□□□□ 0.84
SIX4-203ENST00000556952 MEX3BQ6ZN04 569 aaKnown RBP20.3■□□□□ 0.84
SIX4-203ENST00000556952 HIST1H2AAQ96QV6 131 aa20.3■□□□□ 0.84
SIX4-203ENST00000556952 NKX3-1Q99801 234 aaPredicted RBP20.3■□□□□ 0.84
SIX4-203ENST00000556952 PPP1R3EQ9H7J1 279 aa20.3■□□□□ 0.84
SIX4-203ENST00000556952 MRPS28Q9Y2Q9 187 aaKnown RBP20.3■□□□□ 0.84
SIX4-203ENST00000556952 NOP16Q9Y3C1 178 aaKnown RBP20.3■□□□□ 0.84
SIX4-203ENST00000556952 FAM230AA0A1W2PPH8 454 aa20.29■□□□□ 0.84
SIX4-203ENST00000556952 FAM25AB3EWG3 89 aa20.29■□□□□ 0.84
SIX4-203ENST00000556952 FAM25CB3EWG5 89 aa20.29■□□□□ 0.84
SIX4-203ENST00000556952 FAM25GB3EWG6 89 aa20.29■□□□□ 0.84
SIX4-203ENST00000556952 LILRA1O75019 489 aa20.29■□□□□ 0.84
SIX4-203ENST00000556952 UBBP0CG47 229 aa20.29■□□□□ 0.84
SIX4-203ENST00000556952 ELK1P19419 428 aa20.29■□□□□ 0.84
SIX4-203ENST00000556952 ALDH3B1P43353 468 aa20.29■□□□□ 0.84
SIX4-203ENST00000556952 EVX1P49640 407 aa20.29■□□□□ 0.84
SIX4-203ENST00000556952 ATP1B3P54709 279 aa20.29■□□□□ 0.84
SIX4-203ENST00000556952 C2orf76Q3KRA6 126 aa20.29■□□□□ 0.84
SIX4-203ENST00000556952 DMRTC1Q5HYR2 192 aa20.29■□□□□ 0.84
SIX4-203ENST00000556952 CRIP3Q6Q6R5 217 aa20.29■□□□□ 0.84
SIX4-203ENST00000556952 ANGPTL5Q86XS5 388 aa20.29■□□□□ 0.84
SIX4-203ENST00000556952 OR8G5Q8NG78 346 aa20.29■□□□□ 0.84
SIX4-203ENST00000556952 OR5A2Q8NGI9 324 aa20.29■□□□□ 0.84
SIX4-203ENST00000556952 LINC01560Q8TB33 94 aa20.29■□□□□ 0.84
SIX4-203ENST00000556952 SYNPRQ8TBG9 265 aa20.29■□□□□ 0.84
SIX4-203ENST00000556952 TMEM171Q8WVE6 324 aa20.29■□□□□ 0.84
SIX4-203ENST00000556952 HPSE2Q8WWQ2 592 aa20.29■□□□□ 0.84
SIX4-203ENST00000556952 ITPKCQ96DU7 683 aa20.29■□□□□ 0.84
SIX4-203ENST00000556952 SLC22A4Q9H015 551 aa20.29■□□□□ 0.84
SIX4-203ENST00000556952 CYSLTR2Q9NS75 346 aa20.29■□□□□ 0.84
SIX4-203ENST00000556952 GHRLQ9UBU3 117 aa20.29■□□□□ 0.84
SIX4-203ENST00000556952 OR5B21A6NL26 309 aa20.29■□□□□ 0.84
SIX4-203ENST00000556952 TIMM8AO60220 97 aaPredicted RBP20.29■□□□□ 0.84
SIX4-203ENST00000556952 EIF4EP06730 217 aaKnown RBP20.29■□□□□ 0.84
SIX4-203ENST00000556952 TALDO1P37837 337 aa20.29■□□□□ 0.84
SIX4-203ENST00000556952 OR3A4PP47883 348 aa20.29■□□□□ 0.84
SIX4-203ENST00000556952 FABP6P51161 128 aa20.29■□□□□ 0.84
SIX4-203ENST00000556952 TMEM255AQ5JRV8 349 aa20.29■□□□□ 0.84
SIX4-203ENST00000556952 CNIH2Q6PI25 160 aa20.29■□□□□ 0.84
SIX4-203ENST00000556952 SLC22A25Q6T423 547 aa20.29■□□□□ 0.84
SIX4-203ENST00000556952 METAP1DQ6UB28 335 aaPredicted RBP20.29■□□□□ 0.84
SIX4-203ENST00000556952 RNF144BQ7Z419 303 aa20.29■□□□□ 0.84
SIX4-203ENST00000556952 RAB40AQ8WXH6 277 aa20.29■□□□□ 0.84
SIX4-203ENST00000556952 OR5P3Q8WZ94 311 aa20.29■□□□□ 0.84
SIX4-203ENST00000556952 PTX4Q96A99 478 aa20.29■□□□□ 0.84
SIX4-203ENST00000556952 ABCG5Q9H222 651 aa20.29■□□□□ 0.84
SIX4-203ENST00000556952 PQLC2LA1A4F0 135 aa20.28■□□□□ 0.84
SIX4-203ENST00000556952 CA6P23280 308 aa20.28■□□□□ 0.84
SIX4-203ENST00000556952 PTGFRP43088 359 aa20.28■□□□□ 0.84
SIX4-203ENST00000556952 DMRTC2Q8IXT2 367 aaPredicted RBP20.28■□□□□ 0.84
SIX4-203ENST00000556952 SLC25A38Q96DW6 304 aa20.28■□□□□ 0.84
SIX4-203ENST00000556952 ZNF442Q9H7R0 627 aa20.28■□□□□ 0.84
SIX4-203ENST00000556952 FBLN5Q9UBX5 448 aa20.28■□□□□ 0.84
SIX4-203ENST00000556952 V9GYH0 126 aa20.28■□□□□ 0.84
SIX4-203ENST00000556952 IGKV1-27A0A075B6S5 117 aa20.27■□□□□ 0.84
SIX4-203ENST00000556952 TMEM272A0A1B0GTI8 110 aa20.27■□□□□ 0.84
SIX4-203ENST00000556952 LDLRAD4O15165 306 aa20.27■□□□□ 0.84
SIX4-203ENST00000556952 IGHV3-13P01766 116 aa20.27■□□□□ 0.84
SIX4-203ENST00000556952 NAT2P11245 290 aa20.27■□□□□ 0.84
SIX4-203ENST00000556952 ART1P52961 327 aa20.27■□□□□ 0.84
SIX4-203ENST00000556952 KLF3P57682 345 aaPredicted RBP20.27■□□□□ 0.84
SIX4-203ENST00000556952 ZP1P60852 638 aa20.27■□□□□ 0.84
SIX4-203ENST00000556952 ALKBH6Q3KRA9 238 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms