RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 C8orf82Q6P1X6 216 aaPredicted RBP7.3□□□□□ -1.24
GTF2A1-204ENST00000556268 SMARCD3Q6STE5 483 aa7.3□□□□□ -1.24
GTF2A1-204ENST00000556268 ZNF826PQ6ZT77 177 aa7.3□□□□□ -1.24
GTF2A1-204ENST00000556268 Q8N7P7 452 aa7.3□□□□□ -1.24
GTF2A1-204ENST00000556268 TNFRSF14Q92956 283 aa7.3□□□□□ -1.24
GTF2A1-204ENST00000556268 RSRC1Q96IZ7 334 aaKnown RBP7.3□□□□□ -1.24
GTF2A1-204ENST00000556268 NMNAT3Q96T66 252 aa7.3□□□□□ -1.24
GTF2A1-204ENST00000556268 TMEM120AQ9BXJ8 343 aa7.3□□□□□ -1.24
GTF2A1-204ENST00000556268 RNPEPL1Q9HAU8 725 aa7.3□□□□□ -1.24
GTF2A1-204ENST00000556268 SERTAD4Q9NUC0 356 aa7.3□□□□□ -1.24
GTF2A1-204ENST00000556268 MRPL22Q9NWU5 206 aaKnown RBP7.3□□□□□ -1.24
GTF2A1-204ENST00000556268 C1orf123Q9NWV4 160 aa7.3□□□□□ -1.24
GTF2A1-204ENST00000556268 FAM96BQ9Y3D0 163 aa7.3□□□□□ -1.24
GTF2A1-204ENST00000556268 TNFRSF18Q9Y5U5 241 aa7.3□□□□□ -1.24
GTF2A1-204ENST00000556268 DNAH3Q8TD57 4116 aa7.3□□□□□ -1.24
GTF2A1-204ENST00000556268 TRBV4-1A0A0J9YWV2 114 aa7.29□□□□□ -1.24
GTF2A1-204ENST00000556268 HMGB1P1B2RPK0 211 aaPredicted RBP7.29□□□□□ -1.24
GTF2A1-204ENST00000556268 G3V4G9 280 aa7.29□□□□□ -1.24
GTF2A1-204ENST00000556268 RNASEK-C17orf49H0YIS7 233 aa7.29□□□□□ -1.24
GTF2A1-204ENST00000556268 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.29□□□□□ -1.24
GTF2A1-204ENST00000556268 M0R135 149 aa7.29□□□□□ -1.24
GTF2A1-204ENST00000556268 ZNF682O95780 498 aa7.29□□□□□ -1.24
GTF2A1-204ENST00000556268 SERPINA1P01009 418 aa7.29□□□□□ -1.24
GTF2A1-204ENST00000556268 CSF1P09603 554 aa7.29□□□□□ -1.24
GTF2A1-204ENST00000556268 MUC1P15941 1255 aaPredicted RBP7.29□□□□□ -1.24
GTF2A1-204ENST00000556268 HIST1H1CP16403 213 aaKnown RBP7.29□□□□□ -1.24
GTF2A1-204ENST00000556268 ANOS1P23352 680 aa7.29□□□□□ -1.24
GTF2A1-204ENST00000556268 PPIFP30405 207 aaKnown RBP7.29□□□□□ -1.24
GTF2A1-204ENST00000556268 DDOSTP39656 456 aa7.29□□□□□ -1.24
GTF2A1-204ENST00000556268 KIR2DS4P43632 304 aa7.29□□□□□ -1.24
GTF2A1-204ENST00000556268 CENPAP49450 140 aa7.29□□□□□ -1.24
GTF2A1-204ENST00000556268 OR8B8Q15620 311 aa7.29□□□□□ -1.24
GTF2A1-204ENST00000556268 SNAI3Q3KNW1 292 aa7.29□□□□□ -1.24
GTF2A1-204ENST00000556268 VMO1Q7Z5L0 202 aa7.29□□□□□ -1.24
GTF2A1-204ENST00000556268 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.29□□□□□ -1.24
GTF2A1-204ENST00000556268 CYP4Z1Q86W10 505 aa7.29□□□□□ -1.24
GTF2A1-204ENST00000556268 LINC00346Q8IVM7 164 aa7.29□□□□□ -1.24
GTF2A1-204ENST00000556268 FGFRL1Q8N441 504 aa7.29□□□□□ -1.24
GTF2A1-204ENST00000556268 GALNT4Q8N4A0 578 aa7.29□□□□□ -1.24
GTF2A1-204ENST00000556268 ZBTB34Q8NCN2 500 aa7.29□□□□□ -1.24
GTF2A1-204ENST00000556268 OR5R1Q8NH85 324 aa7.29□□□□□ -1.24
GTF2A1-204ENST00000556268 C8orf46Q8TAG6 207 aa7.29□□□□□ -1.24
GTF2A1-204ENST00000556268 SPSB4Q96A44 273 aa7.29□□□□□ -1.24
GTF2A1-204ENST00000556268 ZNF799Q96GE5 643 aa7.29□□□□□ -1.24
GTF2A1-204ENST00000556268 ERMAPQ96PL5 475 aaPredicted RBP7.29□□□□□ -1.24
GTF2A1-204ENST00000556268 HOPXQ9BPY8 73 aaPredicted RBP7.29□□□□□ -1.24
GTF2A1-204ENST00000556268 MMADHCQ9H3L0 296 aaPredicted RBP7.29□□□□□ -1.24
GTF2A1-204ENST00000556268 ZNRD1Q9P1U0 126 aa7.29□□□□□ -1.24
GTF2A1-204ENST00000556268 KCNG2Q9UJ96 466 aa7.29□□□□□ -1.24
GTF2A1-204ENST00000556268 VPREB3Q9UKI3 123 aa7.29□□□□□ -1.24
GTF2A1-204ENST00000556268 POLR1DQ9Y2S0 133 aa7.29□□□□□ -1.24
GTF2A1-204ENST00000556268 CAB39Q9Y376 341 aaPredicted RBP7.29□□□□□ -1.24
GTF2A1-204ENST00000556268 GGT3PA6NGU5 568 aa7.28□□□□□ -1.24
GTF2A1-204ENST00000556268 NME4O00746 187 aa7.28□□□□□ -1.24
GTF2A1-204ENST00000556268 SLC22A2O15244 555 aa7.28□□□□□ -1.24
GTF2A1-204ENST00000556268 FBP1P09467 338 aa7.28□□□□□ -1.24
GTF2A1-204ENST00000556268 UBE2E1P51965 193 aa7.28□□□□□ -1.24
GTF2A1-204ENST00000556268 SLC7A2P52569 658 aa7.28□□□□□ -1.24
GTF2A1-204ENST00000556268 EFNB2P52799 333 aa7.28□□□□□ -1.24
GTF2A1-204ENST00000556268 UCP3P55916 312 aa7.28□□□□□ -1.24
GTF2A1-204ENST00000556268 MZT1Q08AG7 82 aa7.28□□□□□ -1.24
GTF2A1-204ENST00000556268 HERPUD1Q15011 391 aa7.28□□□□□ -1.24
GTF2A1-204ENST00000556268 PCK2Q16822 640 aa7.28□□□□□ -1.24
GTF2A1-204ENST00000556268 MICBQ29980 383 aa7.28□□□□□ -1.24
GTF2A1-204ENST00000556268 GLYATL3Q5SZD4 288 aa7.28□□□□□ -1.24
GTF2A1-204ENST00000556268 DHRS7BQ6IAN0 325 aaPredicted RBP7.28□□□□□ -1.24
GTF2A1-204ENST00000556268 DRAM2Q6UX65 266 aa7.28□□□□□ -1.24
GTF2A1-204ENST00000556268 MRPL21Q7Z2W9 205 aaKnown RBP7.28□□□□□ -1.24
GTF2A1-204ENST00000556268 ARPINQ7Z6K5 226 aa7.28□□□□□ -1.24
GTF2A1-204ENST00000556268 PDZD9Q8IXQ8 264 aa7.28□□□□□ -1.24
GTF2A1-204ENST00000556268 SCCPDHQ8NBX0 429 aa7.28□□□□□ -1.24
GTF2A1-204ENST00000556268 OR2AJ1Q8NGZ0 328 aa7.28□□□□□ -1.24
GTF2A1-204ENST00000556268 OR4K13Q8NH42 304 aa7.28□□□□□ -1.24
GTF2A1-204ENST00000556268 RP9Q8TA86 221 aaKnown RBP7.28□□□□□ -1.24
GTF2A1-204ENST00000556268 ZNRF4Q8WWF5 429 aa7.28□□□□□ -1.24
GTF2A1-204ENST00000556268 SPTSSAQ969W0 71 aa7.28□□□□□ -1.24
GTF2A1-204ENST00000556268 C12orf43Q96C57 262 aaKnown RBP7.28□□□□□ -1.24
GTF2A1-204ENST00000556268 CCL13Q99616 98 aa7.28□□□□□ -1.24
GTF2A1-204ENST00000556268 TLNRD1Q9H1K6 362 aa7.28□□□□□ -1.24
GTF2A1-204ENST00000556268 ADA2Q9NZK5 511 aa7.28□□□□□ -1.24
GTF2A1-204ENST00000556268 PRPF19Q9UMS4 504 aaKnown RBP7.28□□□□□ -1.24
GTF2A1-204ENST00000556268 AURKCQ9UQB9 309 aa7.28□□□□□ -1.24
GTF2A1-204ENST00000556268 PLXNB1O43157 2135 aa7.28□□□□□ -1.24
GTF2A1-204ENST00000556268 IGHV3OR15-7A0A075B7D8 119 aa7.27□□□□□ -1.25
GTF2A1-204ENST00000556268 A0A1B0GW55 424 aa7.27□□□□□ -1.25
GTF2A1-204ENST00000556268 BHLHE40O14503 412 aa7.27□□□□□ -1.25
GTF2A1-204ENST00000556268 NPFFO15130 113 aa7.27□□□□□ -1.25
GTF2A1-204ENST00000556268 RENP00797 406 aa7.27□□□□□ -1.25
GTF2A1-204ENST00000556268 DUX4L2P0CJ85 424 aa7.27□□□□□ -1.25
GTF2A1-204ENST00000556268 DUX4L3P0CJ86 424 aa7.27□□□□□ -1.25
GTF2A1-204ENST00000556268 DUX4L4P0CJ87 422 aa7.27□□□□□ -1.25
GTF2A1-204ENST00000556268 DUX4L5P0CJ88 424 aa7.27□□□□□ -1.25
GTF2A1-204ENST00000556268 DUX4L6P0CJ89 424 aa7.27□□□□□ -1.25
GTF2A1-204ENST00000556268 DUX4L7P0CJ90 424 aa7.27□□□□□ -1.25
GTF2A1-204ENST00000556268 NDUFB7P17568 137 aa7.27□□□□□ -1.25
GTF2A1-204ENST00000556268 SLC6A6P31641 620 aa7.27□□□□□ -1.25
GTF2A1-204ENST00000556268 GSK3BP49841 420 aa7.27□□□□□ -1.25
GTF2A1-204ENST00000556268 ELF3P78545 371 aaPredicted RBP7.27□□□□□ -1.25
GTF2A1-204ENST00000556268 ACSM1Q08AH1 577 aa7.27□□□□□ -1.25
GTF2A1-204ENST00000556268 FAM76BQ5HYJ3 339 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms