RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 H2AFB1P0C5Y9 115 aa5.93□□□□□ -1.46
SLIRP-204ENST00000555890 H2AFB2P0C5Z0 115 aa5.93□□□□□ -1.46
SLIRP-204ENST00000555890 ZNF24P17028 368 aa5.93□□□□□ -1.46
SLIRP-204ENST00000555890 IGFBP3P17936 291 aaPredicted RBP5.93□□□□□ -1.46
SLIRP-204ENST00000555890 ADRA2CP18825 462 aa5.93□□□□□ -1.46
SLIRP-204ENST00000555890 MALP21145 153 aa5.93□□□□□ -1.46
SLIRP-204ENST00000555890 CFPP27918 469 aa5.93□□□□□ -1.46
SLIRP-204ENST00000555890 BDKRB2P30411 391 aa5.93□□□□□ -1.46
SLIRP-204ENST00000555890 SLC6A9P48067 706 aa5.93□□□□□ -1.46
SLIRP-204ENST00000555890 TPTEP56180 551 aa5.93□□□□□ -1.46
SLIRP-204ENST00000555890 ZNF121P58317 390 aaPredicted RBP5.93□□□□□ -1.46
SLIRP-204ENST00000555890 ERVFRD-1P60508 538 aa5.93□□□□□ -1.46
SLIRP-204ENST00000555890 MRPS10P82664 201 aaKnown RBP5.93□□□□□ -1.46
SLIRP-204ENST00000555890 GALK2Q01415 458 aa5.93□□□□□ -1.46
SLIRP-204ENST00000555890 P2RY14Q15391 338 aa5.93□□□□□ -1.46
SLIRP-204ENST00000555890 TAB1Q15750 504 aa5.93□□□□□ -1.46
SLIRP-204ENST00000555890 RAB11BQ15907 218 aa5.93□□□□□ -1.46
SLIRP-204ENST00000555890 CCDC92Q53HC0 331 aaPredicted RBP5.93□□□□□ -1.46
SLIRP-204ENST00000555890 KHDC1LQ5JSQ8 128 aa5.93□□□□□ -1.46
SLIRP-204ENST00000555890 ZNF57Q68EA5 555 aaPredicted RBP5.93□□□□□ -1.46
SLIRP-204ENST00000555890 CCBE1Q6UXH8 406 aaPredicted RBP5.93□□□□□ -1.46
SLIRP-204ENST00000555890 ZNF813Q6ZN06 617 aa5.93□□□□□ -1.46
SLIRP-204ENST00000555890 ETV3LQ6ZN32 361 aa5.93□□□□□ -1.46
SLIRP-204ENST00000555890 FAM57BQ71RH2 274 aa5.93□□□□□ -1.46
SLIRP-204ENST00000555890 PGAP1Q75T13 922 aa5.93□□□□□ -1.46
SLIRP-204ENST00000555890 SLC16A14Q7RTX9 510 aa5.93□□□□□ -1.46
SLIRP-204ENST00000555890 ABHD12BQ7Z5M8 362 aaPredicted RBP5.93□□□□□ -1.46
SLIRP-204ENST00000555890 ZNF100Q8IYN0 542 aa5.93□□□□□ -1.46
SLIRP-204ENST00000555890 CMTM4Q8IZR5 234 aa5.93□□□□□ -1.46
SLIRP-204ENST00000555890 WFDC11Q8NEX6 87 aa5.93□□□□□ -1.46
SLIRP-204ENST00000555890 OR4M2Q8NGB6 313 aa5.93□□□□□ -1.46
SLIRP-204ENST00000555890 OR6M1Q8NGM8 313 aa5.93□□□□□ -1.46
SLIRP-204ENST00000555890 OR1F12Q8NHA8 337 aa5.93□□□□□ -1.46
SLIRP-204ENST00000555890 SYNPRQ8TBG9 265 aa5.93□□□□□ -1.46
SLIRP-204ENST00000555890 RFT1Q96AA3 541 aa5.93□□□□□ -1.46
SLIRP-204ENST00000555890 APH1AQ96BI3 265 aa5.93□□□□□ -1.46
SLIRP-204ENST00000555890 FGGYQ96C11 551 aa5.93□□□□□ -1.46
SLIRP-204ENST00000555890 WDYHV1Q96HA8 205 aa5.93□□□□□ -1.46
SLIRP-204ENST00000555890 ZFP3Q96NJ6 502 aa5.93□□□□□ -1.46
SLIRP-204ENST00000555890 ABCG5Q9H222 651 aa5.93□□□□□ -1.46
SLIRP-204ENST00000555890 ZDHHC11Q9H8X9 412 aa5.93□□□□□ -1.46
SLIRP-204ENST00000555890 CALHM2Q9HA72 323 aa5.93□□□□□ -1.46
SLIRP-204ENST00000555890 BCO1Q9HAY6 547 aa5.93□□□□□ -1.46
SLIRP-204ENST00000555890 PNRC2Q9NPJ4 139 aaKnown RBP5.93□□□□□ -1.46
SLIRP-204ENST00000555890 DIABLOQ9NR28 239 aa5.93□□□□□ -1.46
SLIRP-204ENST00000555890 SLC17A5Q9NRA2 495 aa5.93□□□□□ -1.46
SLIRP-204ENST00000555890 TPSG1Q9NRR2 321 aa5.93□□□□□ -1.46
SLIRP-204ENST00000555890 GLRX2Q9NS18 164 aa5.93□□□□□ -1.46
SLIRP-204ENST00000555890 PLEK2Q9NYT0 353 aa5.93□□□□□ -1.46
SLIRP-204ENST00000555890 UPB1Q9UBR1 384 aa5.93□□□□□ -1.46
SLIRP-204ENST00000555890 OR5V1Q9UGF6 321 aa5.93□□□□□ -1.46
SLIRP-204ENST00000555890 CLEC4AQ9UMR7 237 aa5.93□□□□□ -1.46
SLIRP-204ENST00000555890 MRPS7Q9Y2R9 242 aaKnown RBP5.93□□□□□ -1.46
SLIRP-204ENST00000555890 ZNF175Q9Y473 711 aa5.93□□□□□ -1.46
SLIRP-204ENST00000555890 ARHGAP21Q5T5U3 1957 aa5.93□□□□□ -1.46
SLIRP-204ENST00000555890 DNAJC13O75165 2243 aa5.93□□□□□ -1.46
SLIRP-204ENST00000555890 ZNF407Q9C0G0 2248 aa5.93□□□□□ -1.46
SLIRP-204ENST00000555890 A0A0B4J203 849 aa5.92□□□□□ -1.46
SLIRP-204ENST00000555890 A0A0U1RQV5 110 aa5.92□□□□□ -1.46
SLIRP-204ENST00000555890 A0A1B0GTI1 187 aa5.92□□□□□ -1.46
SLIRP-204ENST00000555890 SLC22A20A6NK97 555 aa5.92□□□□□ -1.46
SLIRP-204ENST00000555890 F5H5K5 113 aa5.92□□□□□ -1.46
SLIRP-204ENST00000555890 RPL36A-HNRNPH2H7BZ11 118 aa5.92□□□□□ -1.46
SLIRP-204ENST00000555890 EEF1E1O43324 174 aaKnown RBP5.92□□□□□ -1.46
SLIRP-204ENST00000555890 GSTZ1O43708 216 aaPredicted RBP5.92□□□□□ -1.46
SLIRP-204ENST00000555890 DOK2O60496 412 aa5.92□□□□□ -1.46
SLIRP-204ENST00000555890 MTRF1O75570 445 aaKnown RBP5.92□□□□□ -1.46
SLIRP-204ENST00000555890 LY86O95711 162 aa5.92□□□□□ -1.46
SLIRP-204ENST00000555890 IGHG3P01860 377 aa5.92□□□□□ -1.46
SLIRP-204ENST00000555890 CD37P11049 281 aa5.92□□□□□ -1.46
SLIRP-204ENST00000555890 B4GALT1P15291 398 aa5.92□□□□□ -1.46
SLIRP-204ENST00000555890 RAB3AP20336 220 aa5.92□□□□□ -1.46
SLIRP-204ENST00000555890 CCL1P22362 96 aa5.92□□□□□ -1.46
SLIRP-204ENST00000555890 HTR2CP28335 458 aa5.92□□□□□ -1.46
SLIRP-204ENST00000555890 DDOSTP39656 456 aa5.92□□□□□ -1.46
SLIRP-204ENST00000555890 MMP15P51511 669 aa5.92□□□□□ -1.46
SLIRP-204ENST00000555890 CLDN12P56749 244 aa5.92□□□□□ -1.46
SLIRP-204ENST00000555890 ARF1P84077 181 aaKnown RBP5.92□□□□□ -1.46
SLIRP-204ENST00000555890 CD69Q07108 199 aa5.92□□□□□ -1.46
SLIRP-204ENST00000555890 MADCAM1Q13477 382 aa5.92□□□□□ -1.46
SLIRP-204ENST00000555890 SF3B4Q15427 424 aaKnown RBP eCLIP5.92□□□□□ -1.46
SLIRP-204ENST00000555890 MSMPQ1L6U9 139 aa5.92□□□□□ -1.46
SLIRP-204ENST00000555890 MST1LQ2TV78 715 aa5.92□□□□□ -1.46
SLIRP-204ENST00000555890 CR1LQ2VPA4 569 aa5.92□□□□□ -1.46
SLIRP-204ENST00000555890 SLC36A2Q495M3 483 aa5.92□□□□□ -1.46
SLIRP-204ENST00000555890 MIDNQ504T8 468 aa5.92□□□□□ -1.46
SLIRP-204ENST00000555890 C19orf54Q5BKX5 351 aa5.92□□□□□ -1.46
SLIRP-204ENST00000555890 TSPO2Q5TGU0 170 aa5.92□□□□□ -1.46
SLIRP-204ENST00000555890 DRAM2Q6UX65 266 aa5.92□□□□□ -1.46
SLIRP-204ENST00000555890 IGFL3Q6UXB1 125 aa5.92□□□□□ -1.46
SLIRP-204ENST00000555890 P4HA3Q7Z4N8 544 aa5.92□□□□□ -1.46
SLIRP-204ENST00000555890 ZNF554Q86TJ5 538 aa5.92□□□□□ -1.46
SLIRP-204ENST00000555890 TUSC5Q8IXB3 177 aa5.92□□□□□ -1.46
SLIRP-204ENST00000555890 CDH26Q8IXH8 852 aa5.92□□□□□ -1.46
SLIRP-204ENST00000555890 SLC22A24Q8N4F4 322 aa5.92□□□□□ -1.46
SLIRP-204ENST00000555890 JAGN1Q8N5M9 183 aa5.92□□□□□ -1.46
SLIRP-204ENST00000555890 DNAAF1Q8NEP3 725 aa5.92□□□□□ -1.46
SLIRP-204ENST00000555890 OR1M1Q8NGA1 313 aa5.92□□□□□ -1.46
SLIRP-204ENST00000555890 OR8B12Q8NGG6 310 aa5.92□□□□□ -1.46
SLIRP-204ENST00000555890 OR52H1Q8NGJ2 320 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms