RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 RFPL4AA6NLU0 287 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 CCT8L1PA6NM43 557 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 LINC00587B1AMM8 73 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 RFPL4AL1F8VTS6 287 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 H0YL77 283 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 M0QZ92 97 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 CLDN5O00501 218 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 TXNDC9O14530 226 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 PHOX2AO14813 284 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 PFDN6O15212 129 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 ACOX3O15254 700 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 TCAPO15273 167 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 SLC16A4O15374 487 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 B4GALT5O43286 388 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 GMDSO60547 372 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 HUS1O60921 280 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 B3GAT3O94766 335 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 SCELO95171 688 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 VAPBO95292 243 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 LDOC1O95751 146 aaPredicted RBP2.5□□□□□ -2.01
SRP54-209ENST00000555746 SERPINA1P01009 418 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 COX4I1P13073 169 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 UCHL3P15374 230 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 NCK1P16333 377 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 PMCHP20382 165 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 BGNP21810 368 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 BCKDHBP21953 392 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 CD82P27701 267 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 PSMB5P28074 263 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 CFHR2P36980 270 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 HTR5AP47898 357 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 RPL14P50914 215 aaKnown RBP2.5□□□□□ -2.01
SRP54-209ENST00000555746 RPS6P62753 249 aaKnown RBP2.5□□□□□ -2.01
SRP54-209ENST00000555746 PSPHP78330 225 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 AQP6Q13520 282 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 EIF4EBP2Q13542 120 aaPredicted RBP2.5□□□□□ -2.01
SRP54-209ENST00000555746 MESDQ14696 234 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 RAB35Q15286 201 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 SPA17Q15506 151 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 TGIF1Q15583 401 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 MRPL23Q16540 153 aaKnown RBP2.5□□□□□ -2.01
SRP54-209ENST00000555746 LCE3CQ5T5A8 94 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 IDNKQ5T6J7 187 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 RPL13AP3Q6NVV1 102 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 FAM71F2Q6NXP2 309 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 PNCKQ6P2M8 343 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 FAM199XQ6PEV8 388 aaPredicted RBP2.5□□□□□ -2.01
SRP54-209ENST00000555746 TMED4Q7Z7H5 227 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 TGIF2LYQ8IUE0 185 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 MFSD6LQ8IWD5 586 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 PGAM4Q8N0Y7 254 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 SYS1Q8N2H4 156 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 GPD1LQ8N335 351 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 MTURNQ8N3F0 131 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 TMEM156Q8N614 296 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 OR6X1Q8NH79 312 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 RFESDQ8TAC1 157 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 PIGXQ8TBF5 258 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 GTSF1Q8WW33 167 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 ELSPBP1Q96BH3 223 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 TAMM41Q96BW9 452 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 HPDLQ96IR7 371 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 JSRP1Q96MG2 331 aaPredicted RBP2.5□□□□□ -2.01
SRP54-209ENST00000555746 ZFP3Q96NJ6 502 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 AMDHD1Q96NU7 426 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 ZIM3Q96PE6 472 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 TGM7Q96PF1 710 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 XPO6Q96QU8 1125 aaKnown RBP2.5□□□□□ -2.01
SRP54-209ENST00000555746 COPS8Q99627 209 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 NIPSNAP1Q9BPW8 284 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 RSG1Q9BU20 258 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 ZNF426Q9BUY5 554 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 HCAR1Q9BXC0 346 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 MAP1LC3CQ9BXW4 147 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 DUSP16Q9BY84 665 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 NMUR2Q9GZQ4 415 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 CCDC90BQ9GZT6 254 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 ILKAPQ9H0C8 392 aaPredicted RBP2.5□□□□□ -2.01
SRP54-209ENST00000555746 C1orf198Q9H425 327 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 KAT8Q9H7Z6 458 aaKnown RBP2.5□□□□□ -2.01
SRP54-209ENST00000555746 ANKHQ9HCJ1 492 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 RAB18Q9NP72 206 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 ZDHHC4Q9NPG8 344 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 EXOSC3Q9NQT5 275 aaKnown RBP2.5□□□□□ -2.01
SRP54-209ENST00000555746 SIRT7Q9NRC8 400 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 DDX19AQ9NUU7 478 aaKnown RBP2.5□□□□□ -2.01
SRP54-209ENST00000555746 PRR34Q9NV39 138 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 FAIMQ9NVQ4 179 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 NECAP2Q9NVZ3 263 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 SMOXQ9NWM0 555 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 TMEM9Q9P0T7 183 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 IKZF2Q9UKS7 526 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 FBXL3Q9UKT7 428 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 PSG11Q9UQ72 335 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 GSTK1Q9Y2Q3 226 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 MEMO1Q9Y316 297 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 PRELID3BQ9Y3B1 194 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 WDR45Q9Y484 360 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 MRPS18BQ9Y676 258 aaKnown RBP2.5□□□□□ -2.01
SRP54-209ENST00000555746 CHD3Q12873 2000 aaKnown RBP2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms