RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 HIF1ANQ9NWT6 349 aa10.33□□□□□ -0.76
SYNE2-214ENST00000554928 DUX4Q9UBX2 424 aa10.33□□□□□ -0.76
SYNE2-214ENST00000554928 ENPP5Q9UJA9 477 aa10.33□□□□□ -0.76
SYNE2-214ENST00000554928 KCNS2Q9ULS6 477 aa10.33□□□□□ -0.76
SYNE2-214ENST00000554928 PPIAL4AQ9Y536 164 aa10.33□□□□□ -0.76
SYNE2-214ENST00000554928 PCDHGB1Q9Y5G3 927 aa10.33□□□□□ -0.76
SYNE2-214ENST00000554928 ARHGAP32A7KAX9 2087 aa10.32□□□□□ -0.76
SYNE2-214ENST00000554928 A0A1B0GVI7 797 aa10.32□□□□□ -0.76
SYNE2-214ENST00000554928 LRRC30A6NM36 301 aa10.32□□□□□ -0.76
SYNE2-214ENST00000554928 ANXA2P2A6NMY6 339 aa10.32□□□□□ -0.76
SYNE2-214ENST00000554928 ZNF732B4DXR9 585 aa10.32□□□□□ -0.76
SYNE2-214ENST00000554928 H0YHG0 523 aa10.32□□□□□ -0.76
SYNE2-214ENST00000554928 IFNL4K9M1U5 179 aa10.32□□□□□ -0.76
SYNE2-214ENST00000554928 TNFRSF13BO14836 293 aaPredicted RBP10.32□□□□□ -0.76
SYNE2-214ENST00000554928 PHF1O43189 567 aaPredicted RBP10.32□□□□□ -0.76
SYNE2-214ENST00000554928 SYT7O43581 403 aa10.32□□□□□ -0.76
SYNE2-214ENST00000554928 RHBDL1O75783 438 aa10.32□□□□□ -0.76
SYNE2-214ENST00000554928 ATP6V1G2O95670 118 aa10.32□□□□□ -0.76
SYNE2-214ENST00000554928 LALBAP00709 142 aa10.32□□□□□ -0.76
SYNE2-214ENST00000554928 HTR1AP08908 422 aa10.32□□□□□ -0.76
SYNE2-214ENST00000554928 WNT2P09544 360 aa10.32□□□□□ -0.76
SYNE2-214ENST00000554928 IRF2P14316 349 aa10.32□□□□□ -0.76
SYNE2-214ENST00000554928 ATP6V1B1P15313 513 aa10.32□□□□□ -0.76
SYNE2-214ENST00000554928 DVL1P1P54792 670 aaPredicted RBP10.32□□□□□ -0.76
SYNE2-214ENST00000554928 IL18R1Q13478 541 aa10.32□□□□□ -0.76
SYNE2-214ENST00000554928 ALKBH1Q13686 389 aaKnown RBP10.32□□□□□ -0.76
SYNE2-214ENST00000554928 CEACAM21Q3KPI0 293 aa10.32□□□□□ -0.76
SYNE2-214ENST00000554928 FAM76BQ5HYJ3 339 aa10.32□□□□□ -0.76
SYNE2-214ENST00000554928 FAM120AOSQ5T036 256 aa10.32□□□□□ -0.76
SYNE2-214ENST00000554928 FDX2Q6P4F2 183 aa10.32□□□□□ -0.76
SYNE2-214ENST00000554928 C1orf229Q6ZS94 237 aaPredicted RBP10.32□□□□□ -0.76
SYNE2-214ENST00000554928 KCTD8Q6ZWB6 473 aa10.32□□□□□ -0.76
SYNE2-214ENST00000554928 C8orf59Q8N0T1 100 aaPredicted RBP10.32□□□□□ -0.76
SYNE2-214ENST00000554928 SYS1Q8N2H4 156 aa10.32□□□□□ -0.76
SYNE2-214ENST00000554928 FGFRL1Q8N441 504 aa10.32□□□□□ -0.76
SYNE2-214ENST00000554928 SCCPDHQ8NBX0 429 aa10.32□□□□□ -0.76
SYNE2-214ENST00000554928 NPRL2Q8WTW4 380 aa10.32□□□□□ -0.76
SYNE2-214ENST00000554928 TMEM186Q96B77 213 aa10.32□□□□□ -0.76
SYNE2-214ENST00000554928 RAB39BQ96DA2 213 aa10.32□□□□□ -0.76
SYNE2-214ENST00000554928 ADAT3Q96EY9 351 aaPredicted RBP10.32□□□□□ -0.76
SYNE2-214ENST00000554928 JAM3Q9BX67 310 aa10.32□□□□□ -0.76
SYNE2-214ENST00000554928 WDR13Q9H1Z4 485 aa10.32□□□□□ -0.76
SYNE2-214ENST00000554928 OR51I2Q9H344 312 aa10.32□□□□□ -0.76
SYNE2-214ENST00000554928 MMP26Q9NRE1 261 aa10.32□□□□□ -0.76
SYNE2-214ENST00000554928 CTSZQ9UBR2 303 aa10.32□□□□□ -0.76
SYNE2-214ENST00000554928 PCDHGB5Q9Y5G0 923 aa10.32□□□□□ -0.76
SYNE2-214ENST00000554928 SIRT4Q9Y6E7 314 aaPredicted RBP10.32□□□□□ -0.76
SYNE2-214ENST00000554928 CUBNO60494 3623 aa10.31□□□□□ -0.76
SYNE2-214ENST00000554928 TRAPPC2LH3BP13 241 aa10.31□□□□□ -0.76
SYNE2-214ENST00000554928 LGALS8O00214 317 aa10.31□□□□□ -0.76
SYNE2-214ENST00000554928 NRASP01111 189 aa10.31□□□□□ -0.76
SYNE2-214ENST00000554928 GYPAP02724 150 aa10.31□□□□□ -0.76
SYNE2-214ENST00000554928 AMY2BP19961 511 aa10.31□□□□□ -0.76
SYNE2-214ENST00000554928 RIPPLY3P57055 190 aa10.31□□□□□ -0.76
SYNE2-214ENST00000554928 ACTA2P62736 377 aa10.31□□□□□ -0.76
SYNE2-214ENST00000554928 ACTG2P63267 376 aa10.31□□□□□ -0.76
SYNE2-214ENST00000554928 UBE2V2Q15819 145 aa10.31□□□□□ -0.76
SYNE2-214ENST00000554928 KLHL22Q53GT1 634 aa10.31□□□□□ -0.76
SYNE2-214ENST00000554928 CLVS2Q5SYC1 327 aa10.31□□□□□ -0.76
SYNE2-214ENST00000554928 ZBTB37Q5TC79 503 aa10.31□□□□□ -0.76
SYNE2-214ENST00000554928 IZUMO2Q6UXV1 221 aa10.31□□□□□ -0.76
SYNE2-214ENST00000554928 RNF144BQ7Z419 303 aa10.31□□□□□ -0.76
SYNE2-214ENST00000554928 KCTD20Q7Z5Y7 419 aa10.31□□□□□ -0.76
SYNE2-214ENST00000554928 GLCCI1Q86VQ1 547 aa10.31□□□□□ -0.76
SYNE2-214ENST00000554928 FAM90A1Q86YD7 464 aa10.31□□□□□ -0.76
SYNE2-214ENST00000554928 C1orf87Q8N0U7 546 aa10.31□□□□□ -0.76
SYNE2-214ENST00000554928 BATF2Q8N1L9 274 aa10.31□□□□□ -0.76
SYNE2-214ENST00000554928 FTMTQ8N4E7 242 aa10.31□□□□□ -0.76
SYNE2-214ENST00000554928 KLHL36Q8N4N3 616 aa10.31□□□□□ -0.76
SYNE2-214ENST00000554928 SPICQ8N5J4 248 aa10.31□□□□□ -0.76
SYNE2-214ENST00000554928 BPIFB6Q8NFQ5 453 aa10.31□□□□□ -0.76
SYNE2-214ENST00000554928 OR51F2Q8NH61 342 aa10.31□□□□□ -0.76
SYNE2-214ENST00000554928 TRMT10AQ8TBZ6 339 aaKnown RBP10.31□□□□□ -0.76
SYNE2-214ENST00000554928 RGP1Q92546 391 aaPredicted RBP10.31□□□□□ -0.76
SYNE2-214ENST00000554928 ZNF488Q96MN9 340 aa10.31□□□□□ -0.76
SYNE2-214ENST00000554928 PDCD1LG2Q9BQ51 273 aa10.31□□□□□ -0.76
SYNE2-214ENST00000554928 RASSF4Q9H2L5 321 aa10.31□□□□□ -0.76
SYNE2-214ENST00000554928 INPP5EQ9NRR6 644 aa10.31□□□□□ -0.76
SYNE2-214ENST00000554928 SNTG1Q9NSN8 517 aa10.31□□□□□ -0.76
SYNE2-214ENST00000554928 ERVK-18Q9QC07 812 aa10.31□□□□□ -0.76
SYNE2-214ENST00000554928 PSORS1C1Q9UIG5 152 aa10.31□□□□□ -0.76
SYNE2-214ENST00000554928 PCDHB10Q9UN67 800 aa10.31□□□□□ -0.76
SYNE2-214ENST00000554928 DIMT1Q9UNQ2 313 aaKnown RBP10.31□□□□□ -0.76
SYNE2-214ENST00000554928 HSPE1-MOB4S4R3N1 261 aa10.31□□□□□ -0.76
SYNE2-214ENST00000554928 IGKV1-27A0A075B6S5 117 aa10.3□□□□□ -0.76
SYNE2-214ENST00000554928 PQLC2LA1A4F0 135 aa10.3□□□□□ -0.76
SYNE2-214ENST00000554928 OOEPA6NGQ2 149 aa10.3□□□□□ -0.76
SYNE2-214ENST00000554928 TMEM210A6NLX4 147 aa10.3□□□□□ -0.76
SYNE2-214ENST00000554928 AKR7A2O43488 359 aa10.3□□□□□ -0.76
SYNE2-214ENST00000554928 SYNGR1O43759 233 aa10.3□□□□□ -0.76
SYNE2-214ENST00000554928 MTRF1O75570 445 aaKnown RBP10.3□□□□□ -0.76
SYNE2-214ENST00000554928 ZFPL1O95159 310 aa10.3□□□□□ -0.76
SYNE2-214ENST00000554928 UBCP0CG48 685 aaKnown RBP10.3□□□□□ -0.76
SYNE2-214ENST00000554928 SELLP14151 372 aa10.3□□□□□ -0.76
SYNE2-214ENST00000554928 RPS2P15880 293 aaKnown RBP10.3□□□□□ -0.76
SYNE2-214ENST00000554928 DCKP27707 260 aa10.3□□□□□ -0.76
SYNE2-214ENST00000554928 C21orf33P30042 268 aaPredicted RBP10.3□□□□□ -0.76
SYNE2-214ENST00000554928 GNG3P63215 75 aa10.3□□□□□ -0.76
SYNE2-214ENST00000554928 MZT1Q08AG7 82 aa10.3□□□□□ -0.76
SYNE2-214ENST00000554928 ST3GAL4Q11206 333 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms