RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 SLC26A11Q86WA9 606 aa1.02□□□□□ -2.25
PRPF39-208ENST00000554785 BBS5Q8N3I7 341 aa1.02□□□□□ -2.25
PRPF39-208ENST00000554785 LIX1Q8N485 282 aa1.02□□□□□ -2.25
PRPF39-208ENST00000554785 PNKDQ8N490 385 aa1.02□□□□□ -2.25
PRPF39-208ENST00000554785 TMEM251Q8N6I4 163 aa1.02□□□□□ -2.25
PRPF39-208ENST00000554785 TTC29Q8NA56 475 aaPredicted RBP1.02□□□□□ -2.25
PRPF39-208ENST00000554785 LINC01555Q8NAE3 123 aa1.02□□□□□ -2.25
PRPF39-208ENST00000554785 LINC00301Q8NCQ3 95 aa1.02□□□□□ -2.25
PRPF39-208ENST00000554785 TMEM35BQ8NCS4 154 aa1.02□□□□□ -2.25
PRPF39-208ENST00000554785 FAM83FQ8NEG4 500 aaPredicted RBP1.02□□□□□ -2.25
PRPF39-208ENST00000554785 OR13C4Q8NGS5 318 aa1.02□□□□□ -2.25
PRPF39-208ENST00000554785 TFGQ92734 400 aaPredicted RBP1.02□□□□□ -2.25
PRPF39-208ENST00000554785 RNASE6Q93091 150 aaKnown RBP1.02□□□□□ -2.25
PRPF39-208ENST00000554785 RPUSD4Q96CM3 377 aaKnown RBP1.02□□□□□ -2.25
PRPF39-208ENST00000554785 HAUS1Q96CS2 278 aa1.02□□□□□ -2.25
PRPF39-208ENST00000554785 C10orf35Q96D05 121 aa1.02□□□□□ -2.25
PRPF39-208ENST00000554785 TM4SF19Q96DZ7 209 aa1.02□□□□□ -2.25
PRPF39-208ENST00000554785 CYYR1Q96J86 154 aa1.02□□□□□ -2.25
PRPF39-208ENST00000554785 OXGR1Q96P68 337 aa1.02□□□□□ -2.25
PRPF39-208ENST00000554785 KCNA7Q96RP8 456 aa1.02□□□□□ -2.25
PRPF39-208ENST00000554785 LYSTQ99698 3801 aa1.02□□□□□ -2.25
PRPF39-208ENST00000554785 TIMM29Q9BSF4 260 aa1.02□□□□□ -2.25
PRPF39-208ENST00000554785 NAT9Q9BTE0 207 aa1.02□□□□□ -2.25
PRPF39-208ENST00000554785 GON7Q9BXV9 100 aa1.02□□□□□ -2.25
PRPF39-208ENST00000554785 ACTR6Q9GZN1 396 aa1.02□□□□□ -2.25
PRPF39-208ENST00000554785 DRC3Q9H069 523 aa1.02□□□□□ -2.25
PRPF39-208ENST00000554785 FN3KRPQ9HA64 309 aa1.02□□□□□ -2.25
PRPF39-208ENST00000554785 DAZ3Q9NR90 486 aaKnown RBP1.02□□□□□ -2.25
PRPF39-208ENST00000554785 RBM22Q9NW64 420 aaKnown RBP eCLIP1.02□□□□□ -2.25
PRPF39-208ENST00000554785 MTRF1LQ9UGC7 380 aaKnown RBP1.02□□□□□ -2.25
PRPF39-208ENST00000554785 DNAJC12Q9UKB3 198 aa1.02□□□□□ -2.25
PRPF39-208ENST00000554785 PIGLQ9Y2B2 252 aa1.02□□□□□ -2.25
PRPF39-208ENST00000554785 KLF13Q9Y2Y9 288 aaPredicted RBP1.02□□□□□ -2.25
PRPF39-208ENST00000554785 HEY1Q9Y5J3 304 aa1.02□□□□□ -2.25
PRPF39-208ENST00000554785 RYR1P21817 5038 aa1.02□□□□□ -2.25
PRPF39-208ENST00000554785 PVALEFA0A1B0GWK0 134 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 WI2-2373I1.2A0A1W2PRP0 233 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 RBMY1BA6NDE4 496 aaKnown RBP1.01□□□□□ -2.25
PRPF39-208ENST00000554785 RBMY1EA6NEQ0 496 aaKnown RBP1.01□□□□□ -2.25
PRPF39-208ENST00000554785 OR51F1A6NGY5 319 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 GJE1A6NN92 205 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 C17orf51A8MQB3 221 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 H0YC42 278 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 PANO1I0J062 215 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 AGPAT2O15120 278 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 NPIPB7O75200 414 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 HOXC4P09017 264 aaPredicted RBP1.01□□□□□ -2.25
PRPF39-208ENST00000554785 RBMY1DP0C7P1 496 aaKnown RBP1.01□□□□□ -2.25
PRPF39-208ENST00000554785 CCL3P10147 92 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 NR2C1P13056 603 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 TBPP20226 339 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 PCK1P35558 622 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 CTRLP40313 264 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 SYKP43405 635 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 SLCO1A2P46721 670 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 GABRA4P48169 554 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 GSSP48637 474 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 MLF1P58340 268 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 CKAP4Q07065 602 aaKnown RBP1.01□□□□□ -2.25
PRPF39-208ENST00000554785 NRF1Q16656 503 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 SLC25A35Q3KQZ1 300 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 DEFB134Q4QY38 66 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 BOLA3Q53S33 107 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 CCDC122Q5T0U0 273 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 KHDRBS2Q5VWX1 349 aaKnown RBP1.01□□□□□ -2.25
PRPF39-208ENST00000554785 DNAJC24Q6P3W2 148 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 CLEC2AQ6UVW9 174 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 TAS2R42Q7RTR8 314 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 RPS19BP1Q86WX3 136 aaKnown RBP1.01□□□□□ -2.25
PRPF39-208ENST00000554785 UMODL1-AS1Q8N2C9 162 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 RNF175Q8N4F7 328 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 TRAM1L1Q8N609 369 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 ZNF321PQ8N8H1 164 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 FNDC5Q8NAU1 212 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 SUMF2Q8NBJ7 301 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 OR2M7Q8NG81 312 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 OR8J1Q8NGP2 316 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 OR1L4Q8NGR5 311 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 OR51Q1Q8NH59 317 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 OR9G1Q8NH87 305 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 SGMS2Q8NHU3 365 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 ELMO1Q92556 727 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 ARPC1AQ92747 370 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 MYDGFQ969H8 173 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 NT5C3BQ969T7 300 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 TBRG4Q969Z0 631 aaKnown RBP eCLIP1.01□□□□□ -2.25
PRPF39-208ENST00000554785 ITCHQ96J02 903 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 MBOAT4Q96T53 435 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 RASL11BQ9BPW5 248 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 NRIP2Q9BQI9 281 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 OR11A1Q9GZK7 315 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 BPESC1Q9GZL8 116 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 ROGDIQ9GZN7 287 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 RNF167Q9H6Y7 350 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 WDR54Q9H977 334 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 UCK1Q9HA47 277 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 IL26Q9NPH9 171 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 MMP26Q9NRE1 261 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 GIN1Q9NXP7 522 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 ZNF226Q9NYT6 803 aa1.01□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms