RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 PLSCR5A0PG75 271 aa3.47□□□□□ -1.85
VTI1B-203ENST00000554636 C5orf63A6NC05 138 aa3.47□□□□□ -1.85
VTI1B-203ENST00000554636 ARRDC5A6NEK1 342 aa3.47□□□□□ -1.85
VTI1B-203ENST00000554636 TVP23AA6NH52 213 aa3.47□□□□□ -1.85
VTI1B-203ENST00000554636 RNF212BA8MTL3 300 aa3.47□□□□□ -1.85
VTI1B-203ENST00000554636 IQCF6A8MYZ5 107 aa3.47□□□□□ -1.85
VTI1B-203ENST00000554636 B4DSR2 109 aa3.47□□□□□ -1.85
VTI1B-203ENST00000554636 F5H0A9 414 aaPredicted RBP3.47□□□□□ -1.85
VTI1B-203ENST00000554636 MLNRO43193 412 aa3.47□□□□□ -1.85
VTI1B-203ENST00000554636 TPD52L2O43399 206 aaKnown RBP3.47□□□□□ -1.85
VTI1B-203ENST00000554636 ACTL6BO94805 426 aa3.47□□□□□ -1.85
VTI1B-203ENST00000554636 IGHV2-70P01814 119 aa3.47□□□□□ -1.85
VTI1B-203ENST00000554636 CLUP10909 449 aa3.47□□□□□ -1.85
VTI1B-203ENST00000554636 LYL1P12980 280 aa3.47□□□□□ -1.85
VTI1B-203ENST00000554636 HNF1AP20823 631 aa3.47□□□□□ -1.85
VTI1B-203ENST00000554636 TUBG1P23258 451 aa3.47□□□□□ -1.85
VTI1B-203ENST00000554636 OTX1P32242 354 aaPredicted RBP3.47□□□□□ -1.85
VTI1B-203ENST00000554636 TNFSF8P32971 234 aa3.47□□□□□ -1.85
VTI1B-203ENST00000554636 CENPAP49450 140 aa3.47□□□□□ -1.85
VTI1B-203ENST00000554636 RGS6P49758 472 aa3.47□□□□□ -1.85
VTI1B-203ENST00000554636 SLC25A1P53007 311 aa3.47□□□□□ -1.85
VTI1B-203ENST00000554636 TNFAIP6P98066 277 aaPredicted RBP3.47□□□□□ -1.85
VTI1B-203ENST00000554636 SLC3A1Q07837 685 aa3.47□□□□□ -1.85
VTI1B-203ENST00000554636 TRAP1Q12931 704 aaKnown RBP3.47□□□□□ -1.85
VTI1B-203ENST00000554636 CRMP1Q14194 572 aa3.47□□□□□ -1.85
VTI1B-203ENST00000554636 GK3PQ14409 553 aa3.47□□□□□ -1.85
VTI1B-203ENST00000554636 PCK2Q16822 640 aa3.47□□□□□ -1.85
VTI1B-203ENST00000554636 MICAQ29983 383 aa3.47□□□□□ -1.85
VTI1B-203ENST00000554636 HFEQ30201 348 aa3.47□□□□□ -1.85
VTI1B-203ENST00000554636 SLC36A3Q495N2 470 aa3.47□□□□□ -1.85
VTI1B-203ENST00000554636 ATPAF1Q5TC12 328 aaPredicted RBP3.47□□□□□ -1.85
VTI1B-203ENST00000554636 OR2T2Q6IF00 324 aa3.47□□□□□ -1.85
VTI1B-203ENST00000554636 RPL13AP3Q6NVV1 102 aa3.47□□□□□ -1.85
VTI1B-203ENST00000554636 ARL9Q6T311 187 aa3.47□□□□□ -1.85
VTI1B-203ENST00000554636 FBXW12Q6X9E4 464 aa3.47□□□□□ -1.85
VTI1B-203ENST00000554636 TRPM8Q7Z2W7 1104 aa3.47□□□□□ -1.85
VTI1B-203ENST00000554636 TMEM179BQ7Z7N9 219 aa3.47□□□□□ -1.85
VTI1B-203ENST00000554636 DHFR2Q86XF0 187 aa3.47□□□□□ -1.85
VTI1B-203ENST00000554636 AQP12AQ8IXF9 295 aa3.47□□□□□ -1.85
VTI1B-203ENST00000554636 OR5AS1Q8N127 324 aa3.47□□□□□ -1.85
VTI1B-203ENST00000554636 LINC00471Q8N535 108 aa3.47□□□□□ -1.85
VTI1B-203ENST00000554636 IQCF1Q8N6M8 205 aa3.47□□□□□ -1.85
VTI1B-203ENST00000554636 ZNF283Q8N7M2 679 aa3.47□□□□□ -1.85
VTI1B-203ENST00000554636 PRR26Q8N8Z3 221 aa3.47□□□□□ -1.85
VTI1B-203ENST00000554636 GJC3Q8NFK1 279 aa3.47□□□□□ -1.85
VTI1B-203ENST00000554636 OR51L1Q8NGJ5 315 aa3.47□□□□□ -1.85
VTI1B-203ENST00000554636 OR9Q1Q8NGQ5 310 aa3.47□□□□□ -1.85
VTI1B-203ENST00000554636 SPATA3Q8NHX4 192 aa3.47□□□□□ -1.85
VTI1B-203ENST00000554636 NUDCD2Q8WVJ2 157 aa3.47□□□□□ -1.85
VTI1B-203ENST00000554636 PTP4A1Q93096 173 aa3.47□□□□□ -1.85
VTI1B-203ENST00000554636 APOBEC3DQ96AK3 386 aaPredicted RBP3.47□□□□□ -1.85
VTI1B-203ENST00000554636 HAVCR1Q96D42 359 aa3.47□□□□□ -1.85
VTI1B-203ENST00000554636 RAB39BQ96DA2 213 aa3.47□□□□□ -1.85
VTI1B-203ENST00000554636 URB1-AS1Q96HZ7 61 aa3.47□□□□□ -1.85
VTI1B-203ENST00000554636 COG8Q96MW5 612 aa3.47□□□□□ -1.85
VTI1B-203ENST00000554636 NIPSNAP1Q9BPW8 284 aa3.47□□□□□ -1.85
VTI1B-203ENST00000554636 SLC30A2Q9BRI3 323 aa3.47□□□□□ -1.85
VTI1B-203ENST00000554636 THTPAQ9BU02 230 aa3.47□□□□□ -1.85
VTI1B-203ENST00000554636 RBM4Q9BWF3 364 aaKnown RBP3.47□□□□□ -1.85
VTI1B-203ENST00000554636 TSSK6Q9BXA6 273 aa3.47□□□□□ -1.85
VTI1B-203ENST00000554636 NMNAT2Q9BZQ4 307 aa3.47□□□□□ -1.85
VTI1B-203ENST00000554636 EGLN1Q9GZT9 426 aa3.47□□□□□ -1.85
VTI1B-203ENST00000554636 ZNF665Q9H7R5 613 aa3.47□□□□□ -1.85
VTI1B-203ENST00000554636 REEP1Q9H902 201 aa3.47□□□□□ -1.85
VTI1B-203ENST00000554636 LPAR2Q9HBW0 351 aa3.47□□□□□ -1.85
VTI1B-203ENST00000554636 TUBG2Q9NRH3 451 aa3.47□□□□□ -1.85
VTI1B-203ENST00000554636 DDX28Q9NUL7 540 aaKnown RBP3.47□□□□□ -1.85
VTI1B-203ENST00000554636 KCNG2Q9UJ96 466 aa3.47□□□□□ -1.85
VTI1B-203ENST00000554636 BAIAP2Q9UQB8 552 aa3.47□□□□□ -1.85
VTI1B-203ENST00000554636 LRCH1Q9Y2L9 728 aa3.47□□□□□ -1.85
VTI1B-203ENST00000554636 NPTNQ9Y639 398 aa3.47□□□□□ -1.85
VTI1B-203ENST00000554636 COMMD3-BMI1R4GMX3 469 aa3.47□□□□□ -1.85
VTI1B-203ENST00000554636 U3KQV3 271 aa3.47□□□□□ -1.85
VTI1B-203ENST00000554636 TRRAPQ9Y4A5 3859 aa3.46□□□□□ -1.86
VTI1B-203ENST00000554636 TRBV5-7A0A0A0MS05 114 aa3.46□□□□□ -1.86
VTI1B-203ENST00000554636 TCRBV3S1A0A5B6 114 aa3.46□□□□□ -1.86
VTI1B-203ENST00000554636 DHRS12A0PJE2 317 aa3.46□□□□□ -1.86
VTI1B-203ENST00000554636 ISPDA4D126 451 aa3.46□□□□□ -1.86
VTI1B-203ENST00000554636 A8MXK9 166 aa3.46□□□□□ -1.86
VTI1B-203ENST00000554636 F5H5K5 113 aa3.46□□□□□ -1.86
VTI1B-203ENST00000554636 H0YL77 283 aa3.46□□□□□ -1.86
VTI1B-203ENST00000554636 M0R135 149 aa3.46□□□□□ -1.86
VTI1B-203ENST00000554636 PLPP2O43688 288 aa3.46□□□□□ -1.86
VTI1B-203ENST00000554636 PNPP00491 289 aa3.46□□□□□ -1.86
VTI1B-203ENST00000554636 HLA-DQA2P01906 255 aa3.46□□□□□ -1.86
VTI1B-203ENST00000554636 GYPBP06028 91 aa3.46□□□□□ -1.86
VTI1B-203ENST00000554636 SPARCP09486 303 aa3.46□□□□□ -1.86
VTI1B-203ENST00000554636 ZNF823P16415 610 aa3.46□□□□□ -1.86
VTI1B-203ENST00000554636 SELEP16581 610 aa3.46□□□□□ -1.86
VTI1B-203ENST00000554636 ZNF3P17036 446 aa3.46□□□□□ -1.86
VTI1B-203ENST00000554636 SPI1P17947 270 aa3.46□□□□□ -1.86
VTI1B-203ENST00000554636 PCMT1P22061 227 aa3.46□□□□□ -1.86
VTI1B-203ENST00000554636 SRP14P37108 136 aaKnown RBP3.46□□□□□ -1.86
VTI1B-203ENST00000554636 PMELP40967 661 aa3.46□□□□□ -1.86
VTI1B-203ENST00000554636 RPS27P42677 84 aaKnown RBP3.46□□□□□ -1.86
VTI1B-203ENST00000554636 PCP4P48539 62 aa3.46□□□□□ -1.86
VTI1B-203ENST00000554636 RAD23AP54725 363 aa3.46□□□□□ -1.86
VTI1B-203ENST00000554636 ECH1Q13011 328 aa3.46□□□□□ -1.86
VTI1B-203ENST00000554636 GK2Q14410 553 aaPredicted RBP3.46□□□□□ -1.86
VTI1B-203ENST00000554636 ZMYND11Q15326 602 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms