RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 TACSTD2P09758 323 aa5.39□□□□□ -1.55
SCFD1-212ENST00000554486 SLC2A1P11166 492 aa5.39□□□□□ -1.55
SCFD1-212ENST00000554486 ZNF35P13682 527 aa5.39□□□□□ -1.55
SCFD1-212ENST00000554486 PAX7P23759 505 aa5.39□□□□□ -1.55
SCFD1-212ENST00000554486 LOXP28300 417 aaPredicted RBP5.39□□□□□ -1.55
SCFD1-212ENST00000554486 HSD11B1P28845 292 aa5.39□□□□□ -1.55
SCFD1-212ENST00000554486 CALCRP30988 508 aa5.39□□□□□ -1.55
SCFD1-212ENST00000554486 WNT5AP41221 380 aa5.39□□□□□ -1.55
SCFD1-212ENST00000554486 KIR3DL2P43630 455 aa5.39□□□□□ -1.55
SCFD1-212ENST00000554486 ALDH3B2P48448 385 aa5.39□□□□□ -1.55
SCFD1-212ENST00000554486 TGM4P49221 684 aa5.39□□□□□ -1.55
SCFD1-212ENST00000554486 CX3CR1P49238 355 aa5.39□□□□□ -1.55
SCFD1-212ENST00000554486 GDI2P50395 445 aaKnown RBP5.39□□□□□ -1.55
SCFD1-212ENST00000554486 GBX2P52951 348 aaPredicted RBP5.39□□□□□ -1.55
SCFD1-212ENST00000554486 NAAAQ02083 359 aa5.39□□□□□ -1.55
SCFD1-212ENST00000554486 SPOCK1Q08629 439 aa5.39□□□□□ -1.55
SCFD1-212ENST00000554486 ACSM1Q08AH1 577 aa5.39□□□□□ -1.55
SCFD1-212ENST00000554486 TPBGQ13641 420 aa5.39□□□□□ -1.55
SCFD1-212ENST00000554486 ALKBH1Q13686 389 aaKnown RBP5.39□□□□□ -1.55
SCFD1-212ENST00000554486 MED22Q15528 200 aa5.39□□□□□ -1.55
SCFD1-212ENST00000554486 NEDD8Q15843 81 aa5.39□□□□□ -1.55
SCFD1-212ENST00000554486 TIGD6Q17RP2 521 aa5.39□□□□□ -1.55
SCFD1-212ENST00000554486 TBC1D28Q2M2D7 210 aa5.39□□□□□ -1.55
SCFD1-212ENST00000554486 ZNF829Q3KNS6 432 aaPredicted RBP5.39□□□□□ -1.55
SCFD1-212ENST00000554486 SNAI3Q3KNW1 292 aa5.39□□□□□ -1.55
SCFD1-212ENST00000554486 WDR38Q5JTN6 314 aa5.39□□□□□ -1.55
SCFD1-212ENST00000554486 DRAM2Q6UX65 266 aa5.39□□□□□ -1.55
SCFD1-212ENST00000554486 RFPL4BQ6ZWI9 263 aa5.39□□□□□ -1.55
SCFD1-212ENST00000554486 FAM57BQ71RH2 274 aa5.39□□□□□ -1.55
SCFD1-212ENST00000554486 SSX8Q7RTT4 187 aa5.39□□□□□ -1.55
SCFD1-212ENST00000554486 ZNF367Q7RTV3 350 aa5.39□□□□□ -1.55
SCFD1-212ENST00000554486 FAM220AQ7Z4H9 259 aa5.39□□□□□ -1.55
SCFD1-212ENST00000554486 CATSPERDQ86XM0 798 aa5.39□□□□□ -1.55
SCFD1-212ENST00000554486 PRSS35Q8N3Z0 413 aa5.39□□□□□ -1.55
SCFD1-212ENST00000554486 ZNF283Q8N7M2 679 aa5.39□□□□□ -1.55
SCFD1-212ENST00000554486 OR8B12Q8NGG6 310 aa5.39□□□□□ -1.55
SCFD1-212ENST00000554486 OR2G2Q8NGZ5 317 aa5.39□□□□□ -1.55
SCFD1-212ENST00000554486 NTN5Q8WTR8 489 aaPredicted RBP5.39□□□□□ -1.55
SCFD1-212ENST00000554486 GLMPQ8WWB7 406 aa5.39□□□□□ -1.55
SCFD1-212ENST00000554486 FCGR1BQ92637 280 aa5.39□□□□□ -1.55
SCFD1-212ENST00000554486 DPF1Q92782 380 aa5.39□□□□□ -1.55
SCFD1-212ENST00000554486 SPTSSAQ969W0 71 aa5.39□□□□□ -1.55
SCFD1-212ENST00000554486 ZNF799Q96GE5 643 aa5.39□□□□□ -1.55
SCFD1-212ENST00000554486 C4orf45Q96LM5 186 aa5.39□□□□□ -1.55
SCFD1-212ENST00000554486 DACH2Q96NX9 599 aa5.39□□□□□ -1.55
SCFD1-212ENST00000554486 OPALINQ96PE5 141 aa5.39□□□□□ -1.55
SCFD1-212ENST00000554486 MYCBPQ99417 103 aaPredicted RBP5.39□□□□□ -1.55
SCFD1-212ENST00000554486 DOK1Q99704 481 aa5.39□□□□□ -1.55
SCFD1-212ENST00000554486 C1QTNF5Q9BXJ0 243 aa5.39□□□□□ -1.55
SCFD1-212ENST00000554486 CDH20Q9HBT6 801 aa5.39□□□□□ -1.55
SCFD1-212ENST00000554486 ISYNA1Q9NPH2 558 aa5.39□□□□□ -1.55
SCFD1-212ENST00000554486 G6PC2Q9NQR9 355 aa5.39□□□□□ -1.55
SCFD1-212ENST00000554486 NDRG3Q9UGV2 375 aa5.39□□□□□ -1.55
SCFD1-212ENST00000554486 OR52A1Q9UKL2 312 aa5.39□□□□□ -1.55
SCFD1-212ENST00000554486 SLC22A13Q9Y226 551 aa5.39□□□□□ -1.55
SCFD1-212ENST00000554486 KLF2Q9Y5W3 355 aaPredicted RBP5.39□□□□□ -1.55
SCFD1-212ENST00000554486 CENPEQ02224 2701 aa5.38□□□□□ -1.55
SCFD1-212ENST00000554486 PNMA8CA0A1B0GUJ8 204 aa5.38□□□□□ -1.55
SCFD1-212ENST00000554486 ACOD1A6NK06 481 aa5.38□□□□□ -1.55
SCFD1-212ENST00000554486 DEFB108AA8MXU0 73 aa5.38□□□□□ -1.55
SCFD1-212ENST00000554486 LOC110117498-PIK3R3F6TDL0 507 aa5.38□□□□□ -1.55
SCFD1-212ENST00000554486 PRYO14603 147 aa5.38□□□□□ -1.55
SCFD1-212ENST00000554486 CLPTM1O96005 669 aa5.38□□□□□ -1.55
SCFD1-212ENST00000554486 NGFP01138 241 aa5.38□□□□□ -1.55
SCFD1-212ENST00000554486 IGLV3-1P01715 115 aa5.38□□□□□ -1.55
SCFD1-212ENST00000554486 APOC1P02654 83 aa5.38□□□□□ -1.55
SCFD1-212ENST00000554486 TTRP02766 147 aa5.38□□□□□ -1.55
SCFD1-212ENST00000554486 LCATP04180 440 aa5.38□□□□□ -1.55
SCFD1-212ENST00000554486 HSMCR30P0CW71 290 aa5.38□□□□□ -1.55
SCFD1-212ENST00000554486 CCNOP22674 350 aa5.38□□□□□ -1.55
SCFD1-212ENST00000554486 PTAFRP25105 342 aa5.38□□□□□ -1.55
SCFD1-212ENST00000554486 PSMB9P28065 219 aa5.38□□□□□ -1.55
SCFD1-212ENST00000554486 DUSP1P28562 367 aa5.38□□□□□ -1.55
SCFD1-212ENST00000554486 CCR9P51686 369 aa5.38□□□□□ -1.55
SCFD1-212ENST00000554486 TAS2R43P59537 309 aa5.38□□□□□ -1.55
SCFD1-212ENST00000554486 RPL15P61313 204 aaKnown RBP5.38□□□□□ -1.55
SCFD1-212ENST00000554486 BDH1Q02338 343 aa5.38□□□□□ -1.55
SCFD1-212ENST00000554486 BSPH1Q075Z2 132 aa5.38□□□□□ -1.55
SCFD1-212ENST00000554486 SLC3A1Q07837 685 aa5.38□□□□□ -1.55
SCFD1-212ENST00000554486 MLLT11Q13015 90 aaPredicted RBP5.38□□□□□ -1.55
SCFD1-212ENST00000554486 MRPL28Q13084 256 aaKnown RBP5.38□□□□□ -1.55
SCFD1-212ENST00000554486 CDK5R1Q15078 307 aa5.38□□□□□ -1.55
SCFD1-212ENST00000554486 SSX1Q16384 188 aa5.38□□□□□ -1.55
SCFD1-212ENST00000554486 TSTQ16762 297 aaKnown RBP5.38□□□□□ -1.55
SCFD1-212ENST00000554486 CCDC58Q4VC31 144 aa5.38□□□□□ -1.55
SCFD1-212ENST00000554486 ARMCX4Q5H9R4 360 aa5.38□□□□□ -1.55
SCFD1-212ENST00000554486 NCMAPQ5T1S8 102 aa5.38□□□□□ -1.55
SCFD1-212ENST00000554486 SYT6Q5T7P8 510 aaPredicted RBP5.38□□□□□ -1.55
SCFD1-212ENST00000554486 DMKNQ6E0U4 476 aaPredicted RBP5.38□□□□□ -1.55
SCFD1-212ENST00000554486 RPL22L1Q6P5R6 122 aaKnown RBP5.38□□□□□ -1.55
SCFD1-212ENST00000554486 ARL9Q6T311 187 aa5.38□□□□□ -1.55
SCFD1-212ENST00000554486 ZNF788Q6ZQV5 615 aa5.38□□□□□ -1.55
SCFD1-212ENST00000554486 DCDC5Q6ZRR9 648 aa5.38□□□□□ -1.55
SCFD1-212ENST00000554486 MOGAT3Q86VF5 341 aa5.38□□□□□ -1.55
SCFD1-212ENST00000554486 PHC2Q8IXK0 858 aa5.38□□□□□ -1.55
SCFD1-212ENST00000554486 ELMOD2Q8IZ81 293 aa5.38□□□□□ -1.55
SCFD1-212ENST00000554486 ZNF101Q8IZC7 436 aa5.38□□□□□ -1.55
SCFD1-212ENST00000554486 OR52L2PQ8NGH6 319 aa5.38□□□□□ -1.55
SCFD1-212ENST00000554486 OR1J2Q8NGS2 313 aa5.38□□□□□ -1.55
SCFD1-212ENST00000554486 HAVCR2Q8TDQ0 301 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms