RNA–Protein interactions for RNA: ENST00000554214.5

ATXN3-225, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-225ENST00000554214 PPP1R16AQ96I34 528 aa3.76□□□□□ -1.81
ATXN3-225ENST00000554214 ERMAPQ96PL5 475 aaPredicted RBP3.76□□□□□ -1.81
ATXN3-225ENST00000554214 OR2V2Q96R30 315 aa3.76□□□□□ -1.81
ATXN3-225ENST00000554214 ZNF607Q96SK3 696 aa3.76□□□□□ -1.81
ATXN3-225ENST00000554214 CNN2Q99439 309 aaKnown RBP3.76□□□□□ -1.81
ATXN3-225ENST00000554214 NAA11Q9BSU3 229 aaPredicted RBP3.76□□□□□ -1.81
ATXN3-225ENST00000554214 FUNDC2Q9BWH2 189 aa3.76□□□□□ -1.81
ATXN3-225ENST00000554214 ELOVL4Q9GZR5 314 aa3.76□□□□□ -1.81
ATXN3-225ENST00000554214 DHX35Q9H5Z1 703 aaKnown RBP3.76□□□□□ -1.81
ATXN3-225ENST00000554214 HEXA-AS1Q9H8Q6 139 aa3.76□□□□□ -1.81
ATXN3-225ENST00000554214 EML4Q9HC35 981 aaKnown RBP3.76□□□□□ -1.81
ATXN3-225ENST00000554214 SLCO1B3Q9NPD5 702 aa3.76□□□□□ -1.81
ATXN3-225ENST00000554214 YAE1D1Q9NRH1 226 aa3.76□□□□□ -1.81
ATXN3-225ENST00000554214 ADA2Q9NZK5 511 aa3.76□□□□□ -1.81
ATXN3-225ENST00000554214 CNIH4Q9P003 139 aa3.76□□□□□ -1.81
ATXN3-225ENST00000554214 DHCR7Q9UBM7 475 aaKnown RBP3.76□□□□□ -1.81
ATXN3-225ENST00000554214 COPS7AQ9UBW8 275 aa3.76□□□□□ -1.81
ATXN3-225ENST00000554214 RNF11Q9Y3C5 154 aa3.76□□□□□ -1.81
ATXN3-225ENST00000554214 NPTNQ9Y639 398 aa3.76□□□□□ -1.81
ATXN3-225ENST00000554214 ARL5AQ9Y689 179 aa3.76□□□□□ -1.81
ATXN3-225ENST00000554214 SPTA1P02549 2419 aa3.76□□□□□ -1.81
ATXN3-225ENST00000554214 CSMD1Q96PZ7 3565 aa3.76□□□□□ -1.81
ATXN3-225ENST00000554214 CRYBG3Q68DQ2 2970 aa3.76□□□□□ -1.81
ATXN3-225ENST00000554214 BSNQ9UPA5 3926 aa3.76□□□□□ -1.81
ATXN3-225ENST00000554214 CELSR2Q9HCU4 2923 aa3.76□□□□□ -1.81
ATXN3-225ENST00000554214 MYH11P35749 1972 aa3.76□□□□□ -1.81
ATXN3-225ENST00000554214 ITPR2Q14571 2701 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 IGHV4-30-2A0A087WSY4 118 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 FBLL1A6NHQ2 334 aaKnown RBP3.75□□□□□ -1.81
ATXN3-225ENST00000554214 NKX6-3A6NJ46 265 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 SEC14L6B5MCN3 397 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 D6RAR5 112 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 H7C417 338 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 PIRO00625 290 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 BCKDKO14874 412 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 CYB5BO43169 146 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 KDELR3O43731 214 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 ATG12O94817 140 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 SLCO2B1O94956 709 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 GABARAPO95166 117 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 CLDN9O95484 217 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 TTC4O95801 387 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 APOC3P02656 99 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 CD2P06729 351 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 ABHD2P08910 425 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 OR10J4P0C629 311 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 OR56A5P0C7T3 313 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 C1GALT1C1LP0DN25 315 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 AREGP15514 252 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 PGAM1P18669 254 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 TSPAN8P19075 237 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 EPORP19235 508 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 FGF7P21781 194 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 ACHEP22303 614 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 RPS3P23396 243 aaKnown RBP eCLIP3.75□□□□□ -1.81
ATXN3-225ENST00000554214 LMO2P25791 158 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 CD82P27701 267 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 IFNGR2P38484 337 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 CD200P41217 278 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 GRIA1P42261 906 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 TNFRSF4P43489 277 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 PPOXP50336 477 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 RAB28P51157 221 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 GABARAPL2P60520 117 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 SELENOTP62341 195 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 RPS15P62841 145 aaKnown RBP3.75□□□□□ -1.81
ATXN3-225ENST00000554214 CAV1Q03135 178 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 ZNF616Q08AN1 781 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 FABP9Q0Z7S8 132 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 EXOSC2Q13868 293 aaKnown RBP3.75□□□□□ -1.81
ATXN3-225ENST00000554214 NUMA1Q14980 2115 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 ABRAXAS2Q15018 415 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 PTGES3Q15185 160 aaKnown RBP3.75□□□□□ -1.81
ATXN3-225ENST00000554214 VAMP3Q15836 100 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 TAF9Q16594 264 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 SMIM21Q3B7S5 101 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 COX19Q49B96 90 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 EIPR1Q53HC9 387 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 RBM48Q5RL73 367 aaKnown RBP3.75□□□□□ -1.81
ATXN3-225ENST00000554214 PRAMEF8Q5VWM4 474 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 PRAMEF7Q5VXH5 474 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 STEAP4Q687X5 459 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 DNM1P34Q6PK57 102 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 ZNF562Q6V9R5 426 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 CDHR3Q6ZTQ4 885 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 FAM183BPQ6ZVS7 135 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 ABHD13Q7L211 337 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 APTXQ7Z2E3 356 aaKnown RBP3.75□□□□□ -1.81
ATXN3-225ENST00000554214 NAA40Q86UY6 237 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 SLC47A2Q86VL8 602 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 SLC26A11Q86WA9 606 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 PAQR7Q86WK9 346 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 ZDHHC21Q8IVQ6 265 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 NRMQ8IXM6 262 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 CPNE9Q8IYJ1 553 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 PGAM4Q8N0Y7 254 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 FAM86B1Q8N7N1 296 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 YIPF7Q8N8F6 280 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 GATSQ8NAP1 163 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 PXT1Q8NFP0 134 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms