RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 ZNF529Q6P280 563 aa10.36□□□□□ -0.75
SHMT2-209ENST00000553949 UNQ9370/PRO34162Q6UXP9 181 aa10.36□□□□□ -0.75
SHMT2-209ENST00000553949 TMEM91Q6ZNR0 172 aa10.36□□□□□ -0.75
SHMT2-209ENST00000553949 CEACAM19Q7Z692 300 aa10.36□□□□□ -0.75
SHMT2-209ENST00000553949 WDR86Q86TI4 376 aa10.36□□□□□ -0.75
SHMT2-209ENST00000553949 OR1M1Q8NGA1 313 aa10.36□□□□□ -0.75
SHMT2-209ENST00000553949 OR13C9Q8NGT0 318 aa10.36□□□□□ -0.75
SHMT2-209ENST00000553949 NPRL2Q8WTW4 380 aa10.36□□□□□ -0.75
SHMT2-209ENST00000553949 ORAI1Q96D31 301 aa10.36□□□□□ -0.75
SHMT2-209ENST00000553949 GCM1Q9NP62 436 aa10.36□□□□□ -0.75
SHMT2-209ENST00000553949 NOX4Q9NPH5 578 aa10.36□□□□□ -0.75
SHMT2-209ENST00000553949 SLC7A11Q9UPY5 501 aa10.36□□□□□ -0.75
SHMT2-209ENST00000553949 NAV2Q8IVL1 2488 aa10.36□□□□□ -0.75
SHMT2-209ENST00000553949 ARFGEF3Q5TH69 2177 aa10.36□□□□□ -0.75
SHMT2-209ENST00000553949 ITPR2Q14571 2701 aa10.35□□□□□ -0.75
SHMT2-209ENST00000553949 IGHV1-69-2A0A0G2JMI3 117 aa10.35□□□□□ -0.75
SHMT2-209ENST00000553949 FAM230AA0A1W2PPH8 454 aa10.35□□□□□ -0.75
SHMT2-209ENST00000553949 PQLC2LA1A4F0 135 aa10.35□□□□□ -0.75
SHMT2-209ENST00000553949 LYNX1G3V0Z9 82 aa10.35□□□□□ -0.75
SHMT2-209ENST00000553949 GABRPO00591 440 aa10.35□□□□□ -0.75
SHMT2-209ENST00000553949 SULT1B1O43704 296 aa10.35□□□□□ -0.75
SHMT2-209ENST00000553949 SSX4O60224 188 aa10.35□□□□□ -0.75
SHMT2-209ENST00000553949 ALX3O95076 343 aa10.35□□□□□ -0.75
SHMT2-209ENST00000553949 OCMP0CE72 109 aaPredicted RBP10.35□□□□□ -0.75
SHMT2-209ENST00000553949 LYNX1P0DP58 116 aa10.35□□□□□ -0.75
SHMT2-209ENST00000553949 CD36P16671 472 aa10.35□□□□□ -0.75
SHMT2-209ENST00000553949 IGFBP3P17936 291 aaPredicted RBP10.35□□□□□ -0.75
SHMT2-209ENST00000553949 RAB3AP20336 220 aa10.35□□□□□ -0.75
SHMT2-209ENST00000553949 PRKACBP22694 351 aa10.35□□□□□ -0.75
SHMT2-209ENST00000553949 COL8A2P25067 703 aa10.35□□□□□ -0.75
SHMT2-209ENST00000553949 AZGP1P25311 298 aaKnown RBP10.35□□□□□ -0.75
SHMT2-209ENST00000553949 TGFBR2P37173 567 aa10.35□□□□□ -0.75
SHMT2-209ENST00000553949 CRYBB2P43320 205 aa10.35□□□□□ -0.75
SHMT2-209ENST00000553949 FUT6P51993 359 aa10.35□□□□□ -0.75
SHMT2-209ENST00000553949 PPP3R1P63098 170 aa10.35□□□□□ -0.75
SHMT2-209ENST00000553949 ZNF154Q13106 437 aa10.35□□□□□ -0.75
SHMT2-209ENST00000553949 MPPED2Q15777 294 aa10.35□□□□□ -0.75
SHMT2-209ENST00000553949 FAM76BQ5HYJ3 339 aa10.35□□□□□ -0.75
SHMT2-209ENST00000553949 CD200R1LQ6Q8B3 271 aa10.35□□□□□ -0.75
SHMT2-209ENST00000553949 MOGAT3Q86VF5 341 aa10.35□□□□□ -0.75
SHMT2-209ENST00000553949 TRMT10AQ8TBZ6 339 aaKnown RBP10.35□□□□□ -0.75
SHMT2-209ENST00000553949 RDH5Q92781 318 aa10.35□□□□□ -0.75
SHMT2-209ENST00000553949 YIPF5Q969M3 257 aa10.35□□□□□ -0.75
SHMT2-209ENST00000553949 ERGIC1Q969X5 290 aa10.35□□□□□ -0.75
SHMT2-209ENST00000553949 SPSB1Q96BD6 273 aa10.35□□□□□ -0.75
SHMT2-209ENST00000553949 PPIL3Q9H2H8 161 aaKnown RBP10.35□□□□□ -0.75
SHMT2-209ENST00000553949 OR51I2Q9H344 312 aa10.35□□□□□ -0.75
SHMT2-209ENST00000553949 FN3KRPQ9HA64 309 aa10.35□□□□□ -0.75
SHMT2-209ENST00000553949 TREM2Q9NZC2 230 aa10.35□□□□□ -0.75
SHMT2-209ENST00000553949 CKLFQ9UBR5 152 aa10.35□□□□□ -0.75
SHMT2-209ENST00000553949 PPP1R3CQ9UQK1 317 aa10.35□□□□□ -0.75
SHMT2-209ENST00000553949 CACNG2Q9Y698 323 aa10.35□□□□□ -0.75
SHMT2-209ENST00000553949 USF3Q68DE3 2245 aa10.35□□□□□ -0.75
SHMT2-209ENST00000553949 CSMD1Q96PZ7 3565 aa10.34□□□□□ -0.75
SHMT2-209ENST00000553949 TRAV8-7A0A075B6U6 113 aa10.34□□□□□ -0.75
SHMT2-209ENST00000553949 TRDV1A0A1B0GX56 115 aa10.34□□□□□ -0.75
SHMT2-209ENST00000553949 A6NLC8 198 aa10.34□□□□□ -0.75
SHMT2-209ENST00000553949 GPX5O75715 221 aa10.34□□□□□ -0.75
SHMT2-209ENST00000553949 UCHL1P09936 223 aa10.34□□□□□ -0.75
SHMT2-209ENST00000553949 FSTP19883 344 aa10.34□□□□□ -0.75
SHMT2-209ENST00000553949 GALP22466 123 aa10.34□□□□□ -0.75
SHMT2-209ENST00000553949 PMELP40967 661 aa10.34□□□□□ -0.75
SHMT2-209ENST00000553949 RBP2P50120 134 aa10.34□□□□□ -0.75
SHMT2-209ENST00000553949 HNRNPA0Q13151 305 aaKnown RBP10.34□□□□□ -0.75
SHMT2-209ENST00000553949 HFEQ30201 348 aa10.34□□□□□ -0.75
SHMT2-209ENST00000553949 HSD17B12Q53GQ0 312 aa10.34□□□□□ -0.75
SHMT2-209ENST00000553949 FAM27D1Q5T7N8 215 aa10.34□□□□□ -0.75
SHMT2-209ENST00000553949 TGIF2LYQ8IUE0 185 aa10.34□□□□□ -0.75
SHMT2-209ENST00000553949 C11orf53Q8IXP5 236 aa10.34□□□□□ -0.75
SHMT2-209ENST00000553949 ZNF525Q8N782 197 aa10.34□□□□□ -0.75
SHMT2-209ENST00000553949 DNAAF1Q8NEP3 725 aa10.34□□□□□ -0.75
SHMT2-209ENST00000553949 OR51A2Q8NGJ7 313 aa10.34□□□□□ -0.75
SHMT2-209ENST00000553949 ZNF420Q8TAQ5 688 aaPredicted RBP10.34□□□□□ -0.75
SHMT2-209ENST00000553949 Q8TCH9 128 aa10.34□□□□□ -0.75
SHMT2-209ENST00000553949 PHYHIPQ92561 330 aa10.34□□□□□ -0.75
SHMT2-209ENST00000553949 CCL17Q92583 94 aa10.34□□□□□ -0.75
SHMT2-209ENST00000553949 RPL3LQ92901 407 aaKnown RBP10.34□□□□□ -0.75
SHMT2-209ENST00000553949 BORCS8Q96FH0 119 aa10.34□□□□□ -0.75
SHMT2-209ENST00000553949 FOXC2Q99958 501 aa10.34□□□□□ -0.75
SHMT2-209ENST00000553949 TLNRD1Q9H1K6 362 aa10.34□□□□□ -0.75
SHMT2-209ENST00000553949 NEK6Q9HC98 313 aa10.34□□□□□ -0.75
SHMT2-209ENST00000553949 MYOZ1Q9NP98 299 aaPredicted RBP10.34□□□□□ -0.75
SHMT2-209ENST00000553949 DLL4Q9NR61 685 aa10.34□□□□□ -0.75
SHMT2-209ENST00000553949 UFSP2Q9NUQ7 469 aa10.34□□□□□ -0.75
SHMT2-209ENST00000553949 STUB1Q9UNE7 303 aa10.34□□□□□ -0.75
SHMT2-209ENST00000553949 FOXJ3Q9UPW0 622 aa10.34□□□□□ -0.75
SHMT2-209ENST00000553949 PDZD2O15018 2839 aa10.33□□□□□ -0.76
SHMT2-209ENST00000553949 IGKV1-27A0A075B6S5 117 aa10.33□□□□□ -0.76
SHMT2-209ENST00000553949 LRP5LA4QPB2 252 aa10.33□□□□□ -0.76
SHMT2-209ENST00000553949 CDIPTO14735 213 aa10.33□□□□□ -0.76
SHMT2-209ENST00000553949 RP2O75695 350 aa10.33□□□□□ -0.76
SHMT2-209ENST00000553949 ARL6IP5O75915 188 aa10.33□□□□□ -0.76
SHMT2-209ENST00000553949 TFAP2AP05549 437 aa10.33□□□□□ -0.76
SHMT2-209ENST00000553949 HCKP08631 526 aa10.33□□□□□ -0.76
SHMT2-209ENST00000553949 GADD45AP24522 165 aa10.33□□□□□ -0.76
SHMT2-209ENST00000553949 HAAOP46952 286 aa10.33□□□□□ -0.76
SHMT2-209ENST00000553949 ALDH3B2P48448 385 aa10.33□□□□□ -0.76
SHMT2-209ENST00000553949 MTCP1P56278 107 aa10.33□□□□□ -0.76
SHMT2-209ENST00000553949 CARTPTQ16568 116 aa10.33□□□□□ -0.76
SHMT2-209ENST00000553949 Q5PR19 223 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms