RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 FOXH1O75593 365 aa7.02□□□□□ -1.29
PSEN1-209ENST00000553855 DHRS3O75911 302 aa7.02□□□□□ -1.29
PSEN1-209ENST00000553855 CYB5R3P00387 301 aaPredicted RBP7.02□□□□□ -1.29
PSEN1-209ENST00000553855 SERPINA3P01011 423 aa7.02□□□□□ -1.29
PSEN1-209ENST00000553855 MSMBP08118 114 aa7.02□□□□□ -1.29
PSEN1-209ENST00000553855 OCM2P0CE71 109 aa7.02□□□□□ -1.29
PSEN1-209ENST00000553855 OCMP0CE72 109 aaPredicted RBP7.02□□□□□ -1.29
PSEN1-209ENST00000553855 RPS2P15880 293 aaKnown RBP7.02□□□□□ -1.29
PSEN1-209ENST00000553855 DVL1P1P54792 670 aaPredicted RBP7.02□□□□□ -1.29
PSEN1-209ENST00000553855 SLC34A1Q06495 639 aa7.02□□□□□ -1.29
PSEN1-209ENST00000553855 RAB40BQ12829 278 aa7.02□□□□□ -1.29
PSEN1-209ENST00000553855 MRPL28Q13084 256 aaKnown RBP7.02□□□□□ -1.29
PSEN1-209ENST00000553855 PRDX4Q13162 271 aa7.02□□□□□ -1.29
PSEN1-209ENST00000553855 OR8B8Q15620 311 aa7.02□□□□□ -1.29
PSEN1-209ENST00000553855 PRAMEF6Q5VXH4 476 aa7.02□□□□□ -1.29
PSEN1-209ENST00000553855 LPCAT4Q643R3 524 aa7.02□□□□□ -1.29
PSEN1-209ENST00000553855 DOK3Q7L591 496 aa7.02□□□□□ -1.29
PSEN1-209ENST00000553855 PRSS45Q7RTY3 260 aa7.02□□□□□ -1.29
PSEN1-209ENST00000553855 LRRC28Q86X40 367 aaPredicted RBP7.02□□□□□ -1.29
PSEN1-209ENST00000553855 ENTHD1Q8IYW4 607 aa7.02□□□□□ -1.29
PSEN1-209ENST00000553855 RHOXF1Q8NHV9 184 aa7.02□□□□□ -1.29
PSEN1-209ENST00000553855 OR51E1Q8TCB6 317 aa7.02□□□□□ -1.29
PSEN1-209ENST00000553855 HAVCR2Q8TDQ0 301 aa7.02□□□□□ -1.29
PSEN1-209ENST00000553855 RNF170Q96K19 258 aa7.02□□□□□ -1.29
PSEN1-209ENST00000553855 SIGLEC11Q96RL6 698 aa7.02□□□□□ -1.29
PSEN1-209ENST00000553855 NEK6Q9HC98 313 aa7.02□□□□□ -1.29
PSEN1-209ENST00000553855 GPR84Q9NQS5 396 aa7.02□□□□□ -1.29
PSEN1-209ENST00000553855 INPP5EQ9NRR6 644 aa7.02□□□□□ -1.29
PSEN1-209ENST00000553855 MIOXQ9UGB7 285 aa7.02□□□□□ -1.29
PSEN1-209ENST00000553855 MRM2Q9UI43 246 aaKnown RBP7.02□□□□□ -1.29
PSEN1-209ENST00000553855 RHBDD3Q9Y3P4 386 aa7.02□□□□□ -1.29
PSEN1-209ENST00000553855 MAP1AP78559 2803 aaPredicted RBP7.02□□□□□ -1.29
PSEN1-209ENST00000553855 A0A0G2JMP0 313 aa7.01□□□□□ -1.29
PSEN1-209ENST00000553855 A0A0X1KG70 313 aa7.01□□□□□ -1.29
PSEN1-209ENST00000553855 A0A1B0GWJ7 208 aa7.01□□□□□ -1.29
PSEN1-209ENST00000553855 C5orf63A6NC05 138 aa7.01□□□□□ -1.29
PSEN1-209ENST00000553855 J3QLW9 94 aa7.01□□□□□ -1.29
PSEN1-209ENST00000553855 SYT7O43581 403 aa7.01□□□□□ -1.29
PSEN1-209ENST00000553855 NDUFA2O43678 99 aa7.01□□□□□ -1.29
PSEN1-209ENST00000553855 FAM20BO75063 409 aa7.01□□□□□ -1.29
PSEN1-209ENST00000553855 CST4P01036 141 aa7.01□□□□□ -1.29
PSEN1-209ENST00000553855 IGHV2-70P01814 119 aa7.01□□□□□ -1.29
PSEN1-209ENST00000553855 IGHV2-5P01817 119 aa7.01□□□□□ -1.29
PSEN1-209ENST00000553855 HTR1AP08908 422 aa7.01□□□□□ -1.29
PSEN1-209ENST00000553855 UBCP0CG48 685 aaKnown RBP7.01□□□□□ -1.29
PSEN1-209ENST00000553855 DBTP11182 482 aaKnown RBP7.01□□□□□ -1.29
PSEN1-209ENST00000553855 ZNF19P17023 458 aa7.01□□□□□ -1.29
PSEN1-209ENST00000553855 MYL12AP19105 171 aa7.01□□□□□ -1.29
PSEN1-209ENST00000553855 GATA3P23771 443 aa7.01□□□□□ -1.29
PSEN1-209ENST00000553855 PEX2P28328 305 aa7.01□□□□□ -1.29
PSEN1-209ENST00000553855 IL2RGP31785 369 aa7.01□□□□□ -1.29
PSEN1-209ENST00000553855 MTNR1BP49286 362 aa7.01□□□□□ -1.29
PSEN1-209ENST00000553855 LMO4P61968 165 aa7.01□□□□□ -1.29
PSEN1-209ENST00000553855 ELF3P78545 371 aaPredicted RBP7.01□□□□□ -1.29
PSEN1-209ENST00000553855 SRSF2Q01130 221 aaKnown RBP7.01□□□□□ -1.29
PSEN1-209ENST00000553855 ZNF91Q05481 1191 aa7.01□□□□□ -1.29
PSEN1-209ENST00000553855 KRTAP1-1Q07627 177 aa7.01□□□□□ -1.29
PSEN1-209ENST00000553855 MAB21L1Q13394 359 aa7.01□□□□□ -1.29
PSEN1-209ENST00000553855 IL18R1Q13478 541 aa7.01□□□□□ -1.29
PSEN1-209ENST00000553855 TP53I3Q53FA7 332 aa7.01□□□□□ -1.29
PSEN1-209ENST00000553855 CLVS2Q5SYC1 327 aa7.01□□□□□ -1.29
PSEN1-209ENST00000553855 ZNF684Q5T5D7 378 aa7.01□□□□□ -1.29
PSEN1-209ENST00000553855 TMEM244Q5VVB8 128 aa7.01□□□□□ -1.29
PSEN1-209ENST00000553855 DCAF12L2Q5VW00 463 aa7.01□□□□□ -1.29
PSEN1-209ENST00000553855 LIPNQ5VXI9 398 aa7.01□□□□□ -1.29
PSEN1-209ENST00000553855 PLCXD3Q63HM9 321 aa7.01□□□□□ -1.29
PSEN1-209ENST00000553855 FAHD2BQ6P2I3 314 aaPredicted RBP7.01□□□□□ -1.29
PSEN1-209ENST00000553855 MOB3CQ70IA8 216 aa7.01□□□□□ -1.29
PSEN1-209ENST00000553855 EGFL6Q8IUX8 553 aa7.01□□□□□ -1.29
PSEN1-209ENST00000553855 ELMOD2Q8IZ81 293 aa7.01□□□□□ -1.29
PSEN1-209ENST00000553855 C8orf59Q8N0T1 100 aaPredicted RBP7.01□□□□□ -1.29
PSEN1-209ENST00000553855 DEFB108BQ8NET1 73 aa7.01□□□□□ -1.29
PSEN1-209ENST00000553855 OR4M2Q8NGB6 313 aa7.01□□□□□ -1.29
PSEN1-209ENST00000553855 OR8B3Q8NGG8 313 aa7.01□□□□□ -1.29
PSEN1-209ENST00000553855 Q8TCH9 128 aa7.01□□□□□ -1.29
PSEN1-209ENST00000553855 DVL3Q92997 716 aaPredicted RBP7.01□□□□□ -1.29
PSEN1-209ENST00000553855 TMEM186Q96B77 213 aa7.01□□□□□ -1.29
PSEN1-209ENST00000553855 NEIL1Q96FI4 390 aaPredicted RBP7.01□□□□□ -1.29
PSEN1-209ENST00000553855 FAHD2AQ96GK7 314 aa7.01□□□□□ -1.29
PSEN1-209ENST00000553855 OR8B2Q96RD0 313 aa7.01□□□□□ -1.29
PSEN1-209ENST00000553855 SOX7Q9BT81 388 aa7.01□□□□□ -1.29
PSEN1-209ENST00000553855 RNPEPL1Q9HAU8 725 aa7.01□□□□□ -1.29
PSEN1-209ENST00000553855 PATZ1Q9HBE1 687 aaKnown RBP7.01□□□□□ -1.29
PSEN1-209ENST00000553855 HIF1ANQ9NWT6 349 aa7.01□□□□□ -1.29
PSEN1-209ENST00000553855 ZNF319Q9P2F9 582 aa7.01□□□□□ -1.29
PSEN1-209ENST00000553855 DNAJB11Q9UBS4 358 aa7.01□□□□□ -1.29
PSEN1-209ENST00000553855 OR5V1Q9UGF6 321 aa7.01□□□□□ -1.29
PSEN1-209ENST00000553855 SLC7A11Q9UPY5 501 aa7.01□□□□□ -1.29
PSEN1-209ENST00000553855 PIGLQ9Y2B2 252 aa7.01□□□□□ -1.29
PSEN1-209ENST00000553855 HSPE1-MOB4S4R3N1 261 aa7.01□□□□□ -1.29
PSEN1-209ENST00000553855 CELSR1Q9NYQ6 3014 aa7□□□□□ -1.29
PSEN1-209ENST00000553855 OR5B21A6NL26 309 aa7□□□□□ -1.29
PSEN1-209ENST00000553855 NOTOA8MTQ0 251 aa7□□□□□ -1.29
PSEN1-209ENST00000553855 FAM157AC9JC47 383 aa7□□□□□ -1.29
PSEN1-209ENST00000553855 H0YAE9 185 aa7□□□□□ -1.29
PSEN1-209ENST00000553855 J3QLI3 93 aa7□□□□□ -1.29
PSEN1-209ENST00000553855 LGALS8O00214 317 aa7□□□□□ -1.29
PSEN1-209ENST00000553855 P2RY10O00398 339 aa7□□□□□ -1.29
PSEN1-209ENST00000553855 CASQ2O14958 399 aaPredicted RBP7□□□□□ -1.29
PSEN1-209ENST00000553855 MAGEB4O15481 346 aaPredicted RBP7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms