RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 NKAPP1Q8N9T2 125 aa2.13□□□□□ -2.07
SCFD1-210ENST00000553693 SPERTQ8NA61 448 aa2.13□□□□□ -2.07
SCFD1-210ENST00000553693 OR2A1Q8NGT9 310 aa2.13□□□□□ -2.07
SCFD1-210ENST00000553693 OR10R2Q8NGX6 335 aa2.13□□□□□ -2.07
SCFD1-210ENST00000553693 OR2G3Q8NGZ4 309 aa2.13□□□□□ -2.07
SCFD1-210ENST00000553693 ZNF461Q8TAF7 563 aa2.13□□□□□ -2.07
SCFD1-210ENST00000553693 OR51E1Q8TCB6 317 aa2.13□□□□□ -2.07
SCFD1-210ENST00000553693 APH1BQ8WW43 257 aa2.13□□□□□ -2.07
SCFD1-210ENST00000553693 GIMAP1Q8WWP7 306 aa2.13□□□□□ -2.07
SCFD1-210ENST00000553693 TMEM54Q969K7 222 aa2.13□□□□□ -2.07
SCFD1-210ENST00000553693 TMEM230Q96A57 120 aa2.13□□□□□ -2.07
SCFD1-210ENST00000553693 CIDECQ96AQ7 238 aaPredicted RBP2.13□□□□□ -2.07
SCFD1-210ENST00000553693 FAM3DQ96BQ1 224 aa2.13□□□□□ -2.07
SCFD1-210ENST00000553693 RNF185Q96GF1 192 aa2.13□□□□□ -2.07
SCFD1-210ENST00000553693 MSANTD3Q96H12 275 aa2.13□□□□□ -2.07
SCFD1-210ENST00000553693 LZTS2Q9BRK4 669 aa2.13□□□□□ -2.07
SCFD1-210ENST00000553693 GABARAPL3Q9BY60 117 aa2.13□□□□□ -2.07
SCFD1-210ENST00000553693 GAL3ST2Q9H3Q3 398 aa2.13□□□□□ -2.07
SCFD1-210ENST00000553693 EML4Q9HC35 981 aaKnown RBP2.13□□□□□ -2.07
SCFD1-210ENST00000553693 AGPAT4Q9NRZ5 378 aa2.13□□□□□ -2.07
SCFD1-210ENST00000553693 ZNF629Q9UEG4 869 aaPredicted RBP2.13□□□□□ -2.07
SCFD1-210ENST00000553693 CFAP45Q9UL16 551 aa2.13□□□□□ -2.07
SCFD1-210ENST00000553693 HEBP2Q9Y5Z4 205 aa2.13□□□□□ -2.07
SCFD1-210ENST00000553693 HIVEP2P31629 2446 aa2.13□□□□□ -2.07
SCFD1-210ENST00000553693 PHF3Q92576 2039 aaKnown RBP2.13□□□□□ -2.07
SCFD1-210ENST00000553693 MGAQ8IWI9 3026 aa2.12□□□□□ -2.07
SCFD1-210ENST00000553693 SHROOM3Q8TF72 1996 aa2.12□□□□□ -2.07
SCFD1-210ENST00000553693 CACNA1EQ15878 2313 aa2.12□□□□□ -2.07
SCFD1-210ENST00000553693 PDCD11Q14690 1871 aaKnown RBP2.12□□□□□ -2.07
SCFD1-210ENST00000553693 ASCC3Q8N3C0 2202 aaKnown RBP2.12□□□□□ -2.07
SCFD1-210ENST00000553693 A0A096LNJ9 63 aa2.12□□□□□ -2.07
SCFD1-210ENST00000553693 A0A1B0GUH1 482 aa2.12□□□□□ -2.07
SCFD1-210ENST00000553693 A0A1B0GW55 424 aa2.12□□□□□ -2.07
SCFD1-210ENST00000553693 TSPAN11A1L157 253 aa2.12□□□□□ -2.07
SCFD1-210ENST00000553693 ERICH2A1L162 156 aa2.12□□□□□ -2.07
SCFD1-210ENST00000553693 GOLGA8JA6NMD2 632 aa2.12□□□□□ -2.07
SCFD1-210ENST00000553693 ZNF879B4DU55 563 aa2.12□□□□□ -2.07
SCFD1-210ENST00000553693 E7EWF7 191 aa2.12□□□□□ -2.07
SCFD1-210ENST00000553693 K7EQS6 105 aa2.12□□□□□ -2.07
SCFD1-210ENST00000553693 PSMD11O00231 422 aa2.12□□□□□ -2.07
SCFD1-210ENST00000553693 SCAMP2O15127 329 aaKnown RBP2.12□□□□□ -2.07
SCFD1-210ENST00000553693 KMOO15229 486 aa2.12□□□□□ -2.07
SCFD1-210ENST00000553693 MRPS12O15235 138 aaKnown RBP2.12□□□□□ -2.07
SCFD1-210ENST00000553693 DPM1O60762 260 aa2.12□□□□□ -2.07
SCFD1-210ENST00000553693 CLDN11O75508 207 aa2.12□□□□□ -2.07
SCFD1-210ENST00000553693 RAB3DO95716 219 aa2.12□□□□□ -2.07
SCFD1-210ENST00000553693 AIFM1O95831 613 aa2.12□□□□□ -2.07
SCFD1-210ENST00000553693 DUX4L2P0CJ85 424 aa2.12□□□□□ -2.07
SCFD1-210ENST00000553693 DUX4L3P0CJ86 424 aa2.12□□□□□ -2.07
SCFD1-210ENST00000553693 DUX4L5P0CJ88 424 aa2.12□□□□□ -2.07
SCFD1-210ENST00000553693 DUX4L6P0CJ89 424 aa2.12□□□□□ -2.07
SCFD1-210ENST00000553693 DUX4L7P0CJ90 424 aa2.12□□□□□ -2.07
SCFD1-210ENST00000553693 SRMP19623 302 aa2.12□□□□□ -2.07
SCFD1-210ENST00000553693 CNR1P21554 472 aa2.12□□□□□ -2.07
SCFD1-210ENST00000553693 CCNOP22674 350 aa2.12□□□□□ -2.07
SCFD1-210ENST00000553693 DEKP35659 375 aaKnown RBP2.12□□□□□ -2.07
SCFD1-210ENST00000553693 ARR3P36575 388 aa2.12□□□□□ -2.07
SCFD1-210ENST00000553693 P2RY2P41231 377 aa2.12□□□□□ -2.07
SCFD1-210ENST00000553693 CRISP1P54107 249 aa2.12□□□□□ -2.07
SCFD1-210ENST00000553693 CLDN6P56747 220 aa2.12□□□□□ -2.07
SCFD1-210ENST00000553693 CLDN18P56856 261 aa2.12□□□□□ -2.07
SCFD1-210ENST00000553693 TRDNQ13061 729 aa2.12□□□□□ -2.07
SCFD1-210ENST00000553693 TFDP2Q14188 446 aa2.12□□□□□ -2.07
SCFD1-210ENST00000553693 ITIH4Q14624 930 aa2.12□□□□□ -2.07
SCFD1-210ENST00000553693 KIAA0087Q14695 138 aa2.12□□□□□ -2.07
SCFD1-210ENST00000553693 QPRTQ15274 297 aa2.12□□□□□ -2.07
SCFD1-210ENST00000553693 OR7A5Q15622 319 aa2.12□□□□□ -2.07
SCFD1-210ENST00000553693 LY6EQ16553 131 aa2.12□□□□□ -2.07
SCFD1-210ENST00000553693 PTPN20Q4JDL3 420 aa2.12□□□□□ -2.07
SCFD1-210ENST00000553693 CASC10Q5T4H9 136 aa2.12□□□□□ -2.07
SCFD1-210ENST00000553693 SPECC1LQ69YQ0 1117 aa2.12□□□□□ -2.07
SCFD1-210ENST00000553693 RWDD4Q6NW29 188 aaKnown RBP2.12□□□□□ -2.07
SCFD1-210ENST00000553693 DUX4L9Q6RFH8 374 aaPredicted RBP2.12□□□□□ -2.07
SCFD1-210ENST00000553693 APRG1Q8IVJ8 170 aa2.12□□□□□ -2.07
SCFD1-210ENST00000553693 CMTM8Q8IZV2 173 aa2.12□□□□□ -2.07
SCFD1-210ENST00000553693 ARHGAP18Q8N392 663 aa2.12□□□□□ -2.07
SCFD1-210ENST00000553693 ZADH2Q8N4Q0 377 aa2.12□□□□□ -2.07
SCFD1-210ENST00000553693 TRAM1L1Q8N609 369 aa2.12□□□□□ -2.07
SCFD1-210ENST00000553693 RNF182Q8N6D2 247 aa2.12□□□□□ -2.07
SCFD1-210ENST00000553693 C8orf31Q8N9H6 132 aa2.12□□□□□ -2.07
SCFD1-210ENST00000553693 ASCC1Q8N9N2 400 aaKnown RBP2.12□□□□□ -2.07
SCFD1-210ENST00000553693 TSTD1Q8NFU3 115 aa2.12□□□□□ -2.07
SCFD1-210ENST00000553693 OR4F15Q8NGB8 312 aa2.12□□□□□ -2.07
SCFD1-210ENST00000553693 OR13C9Q8NGT0 318 aa2.12□□□□□ -2.07
SCFD1-210ENST00000553693 OR6X1Q8NH79 312 aa2.12□□□□□ -2.07
SCFD1-210ENST00000553693 DTX3LQ8TDB6 740 aa2.12□□□□□ -2.07
SCFD1-210ENST00000553693 ASB9Q96DX5 294 aa2.12□□□□□ -2.07
SCFD1-210ENST00000553693 OR2M2Q96R28 347 aa2.12□□□□□ -2.07
SCFD1-210ENST00000553693 CALN1Q9BXU9 219 aa2.12□□□□□ -2.07
SCFD1-210ENST00000553693 MRPL37Q9BZE1 423 aaKnown RBP2.12□□□□□ -2.07
SCFD1-210ENST00000553693 TM6SF2Q9BZW4 377 aa2.12□□□□□ -2.07
SCFD1-210ENST00000553693 OR11A1Q9GZK7 315 aa2.12□□□□□ -2.07
SCFD1-210ENST00000553693 CHMP4BQ9H444 224 aaKnown RBP2.12□□□□□ -2.07
SCFD1-210ENST00000553693 VCX3AQ9NNX9 186 aa2.12□□□□□ -2.07
SCFD1-210ENST00000553693 CTPS2Q9NRF8 586 aa2.12□□□□□ -2.07
SCFD1-210ENST00000553693 XCL2Q9UBD3 114 aa2.12□□□□□ -2.07
SCFD1-210ENST00000553693 DUX4Q9UBX2 424 aa2.12□□□□□ -2.07
SCFD1-210ENST00000553693 CCL26Q9Y258 94 aa2.12□□□□□ -2.07
SCFD1-210ENST00000553693 RHBDD3Q9Y3P4 386 aa2.12□□□□□ -2.07
SCFD1-210ENST00000553693 VWA8A3KMH1 1905 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms