RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 TMEM244Q5VVB8 128 aa19.12■□□□□ 0.65
TDP1-206ENST00000553569 WDR82Q6UXN9 313 aa19.12■□□□□ 0.65
TDP1-206ENST00000553569 KRT74Q7RTS7 529 aa19.12■□□□□ 0.65
TDP1-206ENST00000553569 GLCCI1Q86VQ1 547 aa19.12■□□□□ 0.65
TDP1-206ENST00000553569 TMEM80Q96HE8 168 aa19.12■□□□□ 0.65
TDP1-206ENST00000553569 TMEM246Q9BRR3 403 aa19.12■□□□□ 0.65
TDP1-206ENST00000553569 TLNRD1Q9H1K6 362 aa19.12■□□□□ 0.65
TDP1-206ENST00000553569 EXOSC1Q9Y3B2 195 aaKnown RBP19.12■□□□□ 0.65
TDP1-206ENST00000553569 EFCAB10A6NFE3 127 aa19.11■□□□□ 0.65
TDP1-206ENST00000553569 RPS2P15880 293 aaKnown RBP19.11■□□□□ 0.65
TDP1-206ENST00000553569 CCR9P51686 369 aa19.11■□□□□ 0.65
TDP1-206ENST00000553569 DVL1P1P54792 670 aaPredicted RBP19.11■□□□□ 0.65
TDP1-206ENST00000553569 SEC61A1P61619 476 aaKnown RBP19.11■□□□□ 0.65
TDP1-206ENST00000553569 OR2G6Q5TZ20 316 aa19.11■□□□□ 0.65
TDP1-206ENST00000553569 TMEM42Q69YG0 159 aa19.11■□□□□ 0.65
TDP1-206ENST00000553569 AHSA2Q719I0 299 aa19.11■□□□□ 0.65
TDP1-206ENST00000553569 GCSAMQ8N6F7 178 aa19.11■□□□□ 0.65
TDP1-206ENST00000553569 ZNF676Q8N7Q3 588 aa19.11■□□□□ 0.65
TDP1-206ENST00000553569 SCCPDHQ8NBX0 429 aa19.11■□□□□ 0.65
TDP1-206ENST00000553569 CCDC54Q8NEL0 328 aa19.11■□□□□ 0.65
TDP1-206ENST00000553569 TMEM186Q96B77 213 aa19.11■□□□□ 0.65
TDP1-206ENST00000553569 HIF1ANQ9NWT6 349 aa19.11■□□□□ 0.65
TDP1-206ENST00000553569 CHCHD3Q9NX63 227 aaKnown RBP19.11■□□□□ 0.65
TDP1-206ENST00000553569 CLEC2DQ9UHP7 191 aa19.11■□□□□ 0.65
TDP1-206ENST00000553569 IGHV3OR15-7A0A075B7D8 119 aa19.1■□□□□ 0.65
TDP1-206ENST00000553569 ANKRD61A6NGH8 418 aa19.1■□□□□ 0.65
TDP1-206ENST00000553569 OR5B21A6NL26 309 aa19.1■□□□□ 0.65
TDP1-206ENST00000553569 OR4C45A6NMZ5 311 aa19.1■□□□□ 0.65
TDP1-206ENST00000553569 F5H0A9 414 aaPredicted RBP19.1■□□□□ 0.65
TDP1-206ENST00000553569 LGALS8O00214 317 aa19.1■□□□□ 0.65
TDP1-206ENST00000553569 PLPP2O43688 288 aa19.1■□□□□ 0.65
TDP1-206ENST00000553569 GMFBP60983 142 aa19.1■□□□□ 0.65
TDP1-206ENST00000553569 LCN2P80188 198 aa19.1■□□□□ 0.65
TDP1-206ENST00000553569 ST3GAL4Q11206 333 aa19.1■□□□□ 0.65
TDP1-206ENST00000553569 MRPL28Q13084 256 aaKnown RBP19.1■□□□□ 0.65
TDP1-206ENST00000553569 TMPRSS11AQ6ZMR5 421 aa19.1■□□□□ 0.65
TDP1-206ENST00000553569 OR5A2Q8NGI9 324 aa19.1■□□□□ 0.65
TDP1-206ENST00000553569 OR10AC1Q8NH08 325 aa19.1■□□□□ 0.65
TDP1-206ENST00000553569 CNOT2Q9NZN8 540 aaKnown RBP19.1■□□□□ 0.65
TDP1-206ENST00000553569 PSORS1C1Q9UIG5 152 aa19.1■□□□□ 0.65
TDP1-206ENST00000553569 CAB39Q9Y376 341 aaPredicted RBP19.1■□□□□ 0.65
TDP1-206ENST00000553569 RRP15Q9Y3B9 282 aaKnown RBP19.1■□□□□ 0.65
TDP1-206ENST00000553569 OOEPA6NGQ2 149 aa19.09■□□□□ 0.65
TDP1-206ENST00000553569 ISG15P05161 165 aa19.09■□□□□ 0.65
TDP1-206ENST00000553569 PIPP12273 146 aaPredicted RBP19.09■□□□□ 0.65
TDP1-206ENST00000553569 ZNF12P17014 697 aa19.09■□□□□ 0.65
TDP1-206ENST00000553569 GTF2A1P52655 376 aaPredicted RBP19.09■□□□□ 0.65
TDP1-206ENST00000553569 RIPPLY3P57055 190 aa19.09■□□□□ 0.65
TDP1-206ENST00000553569 MED21Q13503 144 aa19.09■□□□□ 0.65
TDP1-206ENST00000553569 CR1LQ2VPA4 569 aa19.09■□□□□ 0.65
TDP1-206ENST00000553569 IL17RELQ6ZVW7 336 aa19.09■□□□□ 0.65
TDP1-206ENST00000553569 EGFL6Q8IUX8 553 aa19.09■□□□□ 0.65
TDP1-206ENST00000553569 STX19Q8N4C7 294 aa19.09■□□□□ 0.65
TDP1-206ENST00000553569 TRMT10AQ8TBZ6 339 aaKnown RBP19.09■□□□□ 0.65
TDP1-206ENST00000553569 NPRL2Q8WTW4 380 aa19.09■□□□□ 0.65
TDP1-206ENST00000553569 PLCXD1Q9NUJ7 323 aa19.09■□□□□ 0.65
TDP1-206ENST00000553569 ERVK-18Q9QC07 812 aa19.09■□□□□ 0.65
TDP1-206ENST00000553569 TRAV38-1A0A0B4J264 116 aa19.08■□□□□ 0.64
TDP1-206ENST00000553569 TRAV20A0A0B4J274 112 aa19.08■□□□□ 0.64
TDP1-206ENST00000553569 CRLF1O75462 422 aa19.08■□□□□ 0.64
TDP1-206ENST00000553569 FSTL3O95633 263 aa19.08■□□□□ 0.64
TDP1-206ENST00000553569 LHBP01229 141 aa19.08■□□□□ 0.64
TDP1-206ENST00000553569 CCDC159P0C7I6 412 aa19.08■□□□□ 0.64
TDP1-206ENST00000553569 ZNF20P17024 532 aa19.08■□□□□ 0.64
TDP1-206ENST00000553569 HOXB4P17483 251 aaPredicted RBP19.08■□□□□ 0.64
TDP1-206ENST00000553569 HSPA13P48723 471 aa19.08■□□□□ 0.64
TDP1-206ENST00000553569 ESCO2Q56NI9 601 aa19.08■□□□□ 0.64
TDP1-206ENST00000553569 FAM76BQ5HYJ3 339 aa19.08■□□□□ 0.64
TDP1-206ENST00000553569 HAGHLQ6PII5 290 aaPredicted RBP19.08■□□□□ 0.64
TDP1-206ENST00000553569 LYPD2Q6UXB3 125 aa19.08■□□□□ 0.64
TDP1-206ENST00000553569 DCDC5Q6ZRR9 648 aa19.08■□□□□ 0.64
TDP1-206ENST00000553569 OR51A4Q8NGJ6 313 aa19.08■□□□□ 0.64
TDP1-206ENST00000553569 OR13C3Q8NGS6 347 aa19.08■□□□□ 0.64
TDP1-206ENST00000553569 COMMD4Q9H0A8 199 aa19.08■□□□□ 0.64
TDP1-206ENST00000553569 OR51I2Q9H344 312 aa19.08■□□□□ 0.64
TDP1-206ENST00000553569 MIOXQ9UGB7 285 aa19.08■□□□□ 0.64
TDP1-206ENST00000553569 HHLA2Q9UM44 414 aa19.08■□□□□ 0.64
TDP1-206ENST00000553569 ARHGAP32A7KAX9 2087 aa19.07■□□□□ 0.64
TDP1-206ENST00000553569 TMEM212A6NML5 194 aa19.07■□□□□ 0.64
TDP1-206ENST00000553569 FOXH1O75593 365 aa19.07■□□□□ 0.64
TDP1-206ENST00000553569 RHBDL1O75783 438 aa19.07■□□□□ 0.64
TDP1-206ENST00000553569 GATBO75879 557 aaKnown RBP19.07■□□□□ 0.64
TDP1-206ENST00000553569 GYPAP02724 150 aa19.07■□□□□ 0.64
TDP1-206ENST00000553569 MYF6P23409 242 aa19.07■□□□□ 0.64
TDP1-206ENST00000553569 ZFP36P26651 326 aaKnown RBP19.07■□□□□ 0.64
TDP1-206ENST00000553569 TGM4P49221 684 aa19.07■□□□□ 0.64
TDP1-206ENST00000553569 KCNJ8Q15842 424 aa19.07■□□□□ 0.64
TDP1-206ENST00000553569 C6orf141Q5SZD1 244 aa19.07■□□□□ 0.64
TDP1-206ENST00000553569 FAM120AOSQ5T036 256 aa19.07■□□□□ 0.64
TDP1-206ENST00000553569 XAF1Q6GPH4 301 aa19.07■□□□□ 0.64
TDP1-206ENST00000553569 NLRC3Q7RTR2 1065 aa19.07■□□□□ 0.64
TDP1-206ENST00000553569 OR8B3Q8NGG8 313 aa19.07■□□□□ 0.64
TDP1-206ENST00000553569 OR5AK2Q8NH90 309 aa19.07■□□□□ 0.64
TDP1-206ENST00000553569 HAVCR2Q8TDQ0 301 aa19.07■□□□□ 0.64
TDP1-206ENST00000553569 SEH1LQ96EE3 360 aa19.07■□□□□ 0.64
TDP1-206ENST00000553569 ADAT3Q96EY9 351 aaPredicted RBP19.07■□□□□ 0.64
TDP1-206ENST00000553569 NEIL1Q96FI4 390 aaPredicted RBP19.07■□□□□ 0.64
TDP1-206ENST00000553569 OR8B2Q96RD0 313 aa19.07■□□□□ 0.64
TDP1-206ENST00000553569 PDCD1LG2Q9BQ51 273 aa19.07■□□□□ 0.64
TDP1-206ENST00000553569 ANKRD60Q9BZ19 345 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 122.6 ms