RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 SCRN3Q0VDG4 424 aa11.32□□□□□ -0.6
SHMT2-205ENST00000553474 ARFRP1Q13795 201 aa11.32□□□□□ -0.6
SHMT2-205ENST00000553474 PLEKHN1Q494U1 663 aaPredicted RBP11.32□□□□□ -0.6
SHMT2-205ENST00000553474 RIPPLY2Q5TAB7 128 aa11.32□□□□□ -0.6
SHMT2-205ENST00000553474 H3F3CQ6NXT2 135 aa11.32□□□□□ -0.6
SHMT2-205ENST00000553474 DHRS13Q6UX07 377 aa11.32□□□□□ -0.6
SHMT2-205ENST00000553474 C17orf107Q6ZR85 190 aa11.32□□□□□ -0.6
SHMT2-205ENST00000553474 LHFPL1Q86WI0 220 aa11.32□□□□□ -0.6
SHMT2-205ENST00000553474 OR51T1Q8NGJ9 327 aa11.32□□□□□ -0.6
SHMT2-205ENST00000553474 CPT1CQ8TCG5 803 aa11.32□□□□□ -0.6
SHMT2-205ENST00000553474 ST8SIA4Q92187 359 aa11.32□□□□□ -0.6
SHMT2-205ENST00000553474 ARHGAP5-AS1Q96IT6 56 aa11.32□□□□□ -0.6
SHMT2-205ENST00000553474 SPACA5Q96QH8 159 aa11.32□□□□□ -0.6
SHMT2-205ENST00000553474 RBM24Q9BX46 236 aaKnown RBP11.32□□□□□ -0.6
SHMT2-205ENST00000553474 PLEK2Q9NYT0 353 aa11.32□□□□□ -0.6
SHMT2-205ENST00000553474 KCNMB2Q9Y691 235 aa11.32□□□□□ -0.6
SHMT2-205ENST00000553474 A0A0J9YW62 118 aa11.31□□□□□ -0.6
SHMT2-205ENST00000553474 SPDEFO95238 335 aa11.31□□□□□ -0.6
SHMT2-205ENST00000553474 HPP00738 406 aa11.31□□□□□ -0.6
SHMT2-205ENST00000553474 PMP2P02689 132 aa11.31□□□□□ -0.6
SHMT2-205ENST00000553474 CCL4P13236 92 aa11.31□□□□□ -0.6
SHMT2-205ENST00000553474 AKR1C4P17516 323 aa11.31□□□□□ -0.6
SHMT2-205ENST00000553474 PSMB6P28072 239 aa11.31□□□□□ -0.6
SHMT2-205ENST00000553474 NUP62P37198 522 aaPredicted RBP11.31□□□□□ -0.6
SHMT2-205ENST00000553474 OR3A2P47893 321 aa11.31□□□□□ -0.6
SHMT2-205ENST00000553474 SLC22A6Q4U2R8 563 aa11.31□□□□□ -0.6
SHMT2-205ENST00000553474 PHYHD1Q5SRE7 291 aa11.31□□□□□ -0.6
SHMT2-205ENST00000553474 DCAF12Q5T6F0 453 aa11.31□□□□□ -0.6
SHMT2-205ENST00000553474 SULF2Q8IWU5 870 aa11.31□□□□□ -0.6
SHMT2-205ENST00000553474 ZIC4Q8N9L1 334 aa11.31□□□□□ -0.6
SHMT2-205ENST00000553474 OR1S1Q8NH92 325 aa11.31□□□□□ -0.6
SHMT2-205ENST00000553474 MARCH1Q8TCQ1 289 aa11.31□□□□□ -0.6
SHMT2-205ENST00000553474 SOX7Q9BT81 388 aa11.31□□□□□ -0.6
SHMT2-205ENST00000553474 RGCCQ9H4X1 137 aa11.31□□□□□ -0.6
SHMT2-205ENST00000553474 RASL12Q9NYN1 266 aa11.31□□□□□ -0.6
SHMT2-205ENST00000553474 EDARQ9UNE0 448 aa11.31□□□□□ -0.6
SHMT2-205ENST00000553474 PRELID1Q9Y255 219 aa11.31□□□□□ -0.6
SHMT2-205ENST00000553474 RNF222A6NCQ9 220 aa11.31□□□□□ -0.6
SHMT2-205ENST00000553474 FIGNL2A6NMB9 653 aa11.31□□□□□ -0.6
SHMT2-205ENST00000553474 SMAD9O15198 467 aaKnown RBP11.31□□□□□ -0.6
SHMT2-205ENST00000553474 SFT2D2O95562 160 aa11.31□□□□□ -0.6
SHMT2-205ENST00000553474 CRHP06850 196 aa11.31□□□□□ -0.6
SHMT2-205ENST00000553474 AMY2BP19961 511 aa11.31□□□□□ -0.6
SHMT2-205ENST00000553474 KLK2P20151 261 aa11.31□□□□□ -0.6
SHMT2-205ENST00000553474 POU3F2P20265 443 aaPredicted RBP11.31□□□□□ -0.6
SHMT2-205ENST00000553474 PRKACBP22694 351 aa11.31□□□□□ -0.6
SHMT2-205ENST00000553474 CRYGSP22914 178 aa11.31□□□□□ -0.6
SHMT2-205ENST00000553474 DLSTP36957 453 aa11.31□□□□□ -0.6
SHMT2-205ENST00000553474 PLA2G5P39877 138 aa11.31□□□□□ -0.6
SHMT2-205ENST00000553474 CTAG1AP78358 180 aa11.31□□□□□ -0.6
SHMT2-205ENST00000553474 CNN3Q15417 329 aaKnown RBP11.31□□□□□ -0.6
SHMT2-205ENST00000553474 RSPO1Q2MKA7 263 aaPredicted RBP11.31□□□□□ -0.6
SHMT2-205ENST00000553474 NRN1LQ496H8 165 aa11.31□□□□□ -0.6
SHMT2-205ENST00000553474 SEMA6DQ8NFY4 1073 aa11.31□□□□□ -0.6
SHMT2-205ENST00000553474 OR5AP2Q8NGF4 316 aa11.31□□□□□ -0.6
SHMT2-205ENST00000553474 PCNPQ8WW12 178 aaKnown RBP11.31□□□□□ -0.6
SHMT2-205ENST00000553474 POM121Q96HA1 1249 aa11.31□□□□□ -0.6
SHMT2-205ENST00000553474 JSRP1Q96MG2 331 aaPredicted RBP11.31□□□□□ -0.6
SHMT2-205ENST00000553474 TECTBQ96PL2 329 aa11.31□□□□□ -0.6
SHMT2-205ENST00000553474 UCN2Q96RP3 112 aa11.31□□□□□ -0.6
SHMT2-205ENST00000553474 VRK1Q99986 396 aaPredicted RBP11.31□□□□□ -0.6
SHMT2-205ENST00000553474 BANF2Q9H503 90 aa11.31□□□□□ -0.6
SHMT2-205ENST00000553474 CHMP1AQ9HD42 196 aaPredicted RBP11.31□□□□□ -0.6
SHMT2-205ENST00000553474 ZNF230Q9UIE0 474 aaPredicted RBP11.31□□□□□ -0.6
SHMT2-205ENST00000553474 PADI1Q9ULC6 663 aa11.31□□□□□ -0.6
SHMT2-205ENST00000553474 PIGLQ9Y2B2 252 aa11.31□□□□□ -0.6
SHMT2-205ENST00000553474 PTPRBP23467 1997 aa11.31□□□□□ -0.6
SHMT2-205ENST00000553474 MYO7BQ6PIF6 2116 aa11.3□□□□□ -0.6
SHMT2-205ENST00000553474 SPTBN4Q9H254 2564 aa11.3□□□□□ -0.6
SHMT2-205ENST00000553474 LOC100509620A0A075B734 347 aa11.3□□□□□ -0.6
SHMT2-205ENST00000553474 STMND1H3BQB6 276 aa11.3□□□□□ -0.6
SHMT2-205ENST00000553474 TNFSF11O14788 317 aa11.3□□□□□ -0.6
SHMT2-205ENST00000553474 BET1O15155 118 aa11.3□□□□□ -0.6
SHMT2-205ENST00000553474 RRP8O43159 456 aaKnown RBP11.3□□□□□ -0.6
SHMT2-205ENST00000553474 SGCEO43556 437 aa11.3□□□□□ -0.6
SHMT2-205ENST00000553474 RLN2P04090 185 aa11.3□□□□□ -0.6
SHMT2-205ENST00000553474 PET100P0DJ07 73 aa11.3□□□□□ -0.6
SHMT2-205ENST00000553474 FCGR2AP12318 317 aa11.3□□□□□ -0.6
SHMT2-205ENST00000553474 CEACAM1P13688 526 aa11.3□□□□□ -0.6
SHMT2-205ENST00000553474 BLVRBP30043 206 aaPredicted RBP11.3□□□□□ -0.6
SHMT2-205ENST00000553474 STARP49675 285 aa11.3□□□□□ -0.6
SHMT2-205ENST00000553474 B3GALT5-AS1P59052 145 aa11.3□□□□□ -0.6
SHMT2-205ENST00000553474 PCBD1P61457 104 aa11.3□□□□□ -0.6
SHMT2-205ENST00000553474 NAAAQ02083 359 aa11.3□□□□□ -0.6
SHMT2-205ENST00000553474 SSPNQ14714 243 aa11.3□□□□□ -0.6
SHMT2-205ENST00000553474 UBE2V2Q15819 145 aa11.3□□□□□ -0.6
SHMT2-205ENST00000553474 HES3Q5TGS1 186 aa11.3□□□□□ -0.6
SHMT2-205ENST00000553474 CRIP3Q6Q6R5 217 aa11.3□□□□□ -0.6
SHMT2-205ENST00000553474 MOB3CQ70IA8 216 aa11.3□□□□□ -0.6
SHMT2-205ENST00000553474 GALNTL5Q7Z4T8 443 aa11.3□□□□□ -0.6
SHMT2-205ENST00000553474 GLRX5Q86SX6 157 aa11.3□□□□□ -0.6
SHMT2-205ENST00000553474 ZNF100Q8IYN0 542 aa11.3□□□□□ -0.6
SHMT2-205ENST00000553474 ADAD2Q8NCV1 583 aaKnown RBP11.3□□□□□ -0.6
SHMT2-205ENST00000553474 BVESQ8NE79 360 aa11.3□□□□□ -0.6
SHMT2-205ENST00000553474 PXT1Q8NFP0 134 aa11.3□□□□□ -0.6
SHMT2-205ENST00000553474 STOML3Q8TAV4 291 aa11.3□□□□□ -0.6
SHMT2-205ENST00000553474 EMG1Q92979 244 aaKnown RBP11.3□□□□□ -0.6
SHMT2-205ENST00000553474 C5orf66Q9H5L9 145 aa11.3□□□□□ -0.6
SHMT2-205ENST00000553474 FN3KRPQ9HA64 309 aa11.3□□□□□ -0.6
SHMT2-205ENST00000553474 HSF4Q9ULV5 492 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms