RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 TSPAN31Q12999 210 aa7.33□□□□□ -1.24
SYNE2-209ENST00000553308 CRMP1Q14194 572 aa7.33□□□□□ -1.24
SYNE2-209ENST00000553308 EIF2B1Q14232 305 aaKnown RBP7.33□□□□□ -1.24
SYNE2-209ENST00000553308 CNN3Q15417 329 aaKnown RBP7.33□□□□□ -1.24
SYNE2-209ENST00000553308 DEFB121Q5J5C9 76 aa7.33□□□□□ -1.24
SYNE2-209ENST00000553308 GLYATQ6IB77 296 aa7.33□□□□□ -1.24
SYNE2-209ENST00000553308 C11orf42Q8N5U0 333 aa7.33□□□□□ -1.24
SYNE2-209ENST00000553308 DTX3Q8N9I9 347 aa7.33□□□□□ -1.24
SYNE2-209ENST00000553308 PAPD5Q8NDF8 572 aaKnown RBP7.33□□□□□ -1.24
SYNE2-209ENST00000553308 WFDC9Q8NEX5 89 aa7.33□□□□□ -1.24
SYNE2-209ENST00000553308 OR52L1Q8NGH7 329 aa7.33□□□□□ -1.24
SYNE2-209ENST00000553308 OR8D4Q8NGM9 314 aa7.33□□□□□ -1.24
SYNE2-209ENST00000553308 OR6K6Q8NGW6 343 aa7.33□□□□□ -1.24
SYNE2-209ENST00000553308 OR5K1Q8NHB7 308 aa7.33□□□□□ -1.24
SYNE2-209ENST00000553308 RP9Q8TA86 221 aaKnown RBP7.33□□□□□ -1.24
SYNE2-209ENST00000553308 GNPDA2Q8TDQ7 276 aa7.33□□□□□ -1.24
SYNE2-209ENST00000553308 OR5P3Q8WZ94 311 aa7.33□□□□□ -1.24
SYNE2-209ENST00000553308 RNF170Q96K19 258 aa7.33□□□□□ -1.24
SYNE2-209ENST00000553308 AMELYQ99218 206 aa7.33□□□□□ -1.24
SYNE2-209ENST00000553308 WNT10AQ9GZT5 417 aa7.33□□□□□ -1.24
SYNE2-209ENST00000553308 SP140LQ9H930 580 aa7.33□□□□□ -1.24
SYNE2-209ENST00000553308 CD300AQ9UGN4 299 aa7.33□□□□□ -1.24
SYNE2-209ENST00000553308 SAMD4AQ9UPU9 718 aaKnown RBP7.33□□□□□ -1.24
SYNE2-209ENST00000553308 MPC1Q9Y5U8 109 aa7.33□□□□□ -1.24
SYNE2-209ENST00000553308 CDH10Q9Y6N8 788 aa7.33□□□□□ -1.24
SYNE2-209ENST00000553308 A6NDX4 124 aa7.32□□□□□ -1.24
SYNE2-209ENST00000553308 VGLL3A8MV65 326 aa7.32□□□□□ -1.24
SYNE2-209ENST00000553308 SLC22A2O15244 555 aa7.32□□□□□ -1.24
SYNE2-209ENST00000553308 PEX14O75381 377 aa7.32□□□□□ -1.24
SYNE2-209ENST00000553308 SPI1P17947 270 aa7.32□□□□□ -1.24
SYNE2-209ENST00000553308 RRM2P31350 389 aa7.32□□□□□ -1.24
SYNE2-209ENST00000553308 MSX2P35548 267 aaPredicted RBP7.32□□□□□ -1.24
SYNE2-209ENST00000553308 IFNGR2P38484 337 aa7.32□□□□□ -1.24
SYNE2-209ENST00000553308 NUDT2P50583 147 aa7.32□□□□□ -1.24
SYNE2-209ENST00000553308 GPM6AP51674 278 aa7.32□□□□□ -1.24
SYNE2-209ENST00000553308 CAPZA1P52907 286 aa7.32□□□□□ -1.24
SYNE2-209ENST00000553308 LGALS4P56470 323 aa7.32□□□□□ -1.24
SYNE2-209ENST00000553308 ARSJQ5FYB0 599 aaPredicted RBP7.32□□□□□ -1.24
SYNE2-209ENST00000553308 FAM76BQ5HYJ3 339 aa7.32□□□□□ -1.24
SYNE2-209ENST00000553308 DMRTC1Q5HYR2 192 aa7.32□□□□□ -1.24
SYNE2-209ENST00000553308 TEX30Q5JUR7 227 aa7.32□□□□□ -1.24
SYNE2-209ENST00000553308 ZNF782Q6ZMW2 699 aaPredicted RBP7.32□□□□□ -1.24
SYNE2-209ENST00000553308 CPLX4Q7Z7G2 160 aa7.32□□□□□ -1.24
SYNE2-209ENST00000553308 FTMTQ8N4E7 242 aa7.32□□□□□ -1.24
SYNE2-209ENST00000553308 LINC00471Q8N535 108 aa7.32□□□□□ -1.24
SYNE2-209ENST00000553308 OR4M1Q8NGD0 313 aa7.32□□□□□ -1.24
SYNE2-209ENST00000553308 OR9Q2Q8NGE9 314 aa7.32□□□□□ -1.24
SYNE2-209ENST00000553308 OR52H1Q8NGJ2 320 aa7.32□□□□□ -1.24
SYNE2-209ENST00000553308 OR6N2Q8NGY6 317 aa7.32□□□□□ -1.24
SYNE2-209ENST00000553308 RNF133Q8WVZ7 376 aa7.32□□□□□ -1.24
SYNE2-209ENST00000553308 PIGCQ92535 297 aa7.32□□□□□ -1.24
SYNE2-209ENST00000553308 PGAM5Q96HS1 289 aa7.32□□□□□ -1.24
SYNE2-209ENST00000553308 LYZL4Q96KX0 146 aa7.32□□□□□ -1.24
SYNE2-209ENST00000553308 WWC2-AS2Q96NR7 200 aa7.32□□□□□ -1.24
SYNE2-209ENST00000553308 HOPXQ9BPY8 73 aaPredicted RBP7.32□□□□□ -1.24
SYNE2-209ENST00000553308 ABHD6Q9BV23 337 aa7.32□□□□□ -1.24
SYNE2-209ENST00000553308 NMNAT2Q9BZQ4 307 aa7.32□□□□□ -1.24
SYNE2-209ENST00000553308 PRSS22Q9GZN4 317 aa7.32□□□□□ -1.24
SYNE2-209ENST00000553308 OR10A2Q9H208 303 aa7.32□□□□□ -1.24
SYNE2-209ENST00000553308 YY1AP1Q9H869 796 aa7.32□□□□□ -1.24
SYNE2-209ENST00000553308 HEXA-AS1Q9H8Q6 139 aa7.32□□□□□ -1.24
SYNE2-209ENST00000553308 ABCD2Q9UBJ2 740 aa7.32□□□□□ -1.24
SYNE2-209ENST00000553308 FAM90A8PA6NJQ4 464 aa7.31□□□□□ -1.24
SYNE2-209ENST00000553308 GLCEO94923 617 aa7.31□□□□□ -1.24
SYNE2-209ENST00000553308 CST4P01036 141 aa7.31□□□□□ -1.24
SYNE2-209ENST00000553308 PF4V1P10720 104 aa7.31□□□□□ -1.24
SYNE2-209ENST00000553308 FAHP16930 419 aa7.31□□□□□ -1.24
SYNE2-209ENST00000553308 JUNBP17275 347 aaPredicted RBP7.31□□□□□ -1.24
SYNE2-209ENST00000553308 PAICSP22234 425 aaKnown RBP7.31□□□□□ -1.24
SYNE2-209ENST00000553308 OPRL1P41146 370 aa7.31□□□□□ -1.24
SYNE2-209ENST00000553308 VDAC2P45880 294 aaPredicted RBP7.31□□□□□ -1.24
SYNE2-209ENST00000553308 CEBPDP49716 269 aaPredicted RBP7.31□□□□□ -1.24
SYNE2-209ENST00000553308 SLC25A1P53007 311 aa7.31□□□□□ -1.24
SYNE2-209ENST00000553308 PSME3P61289 254 aa7.31□□□□□ -1.24
SYNE2-209ENST00000553308 RPL31P62899 125 aaKnown RBP7.31□□□□□ -1.24
SYNE2-209ENST00000553308 BLCAPP62952 87 aa7.31□□□□□ -1.24
SYNE2-209ENST00000553308 SLC35A2P78381 396 aa7.31□□□□□ -1.24
SYNE2-209ENST00000553308 CD83Q01151 205 aa7.31□□□□□ -1.24
SYNE2-209ENST00000553308 CD69Q07108 199 aa7.31□□□□□ -1.24
SYNE2-209ENST00000553308 ZNF273Q14593 569 aa7.31□□□□□ -1.24
SYNE2-209ENST00000553308 SNCBQ16143 134 aa7.31□□□□□ -1.24
SYNE2-209ENST00000553308 LDLRAD2Q5SZI1 272 aa7.31□□□□□ -1.24
SYNE2-209ENST00000553308 LINC01590Q5TEZ4 76 aa7.31□□□□□ -1.24
SYNE2-209ENST00000553308 TMEM200BQ69YZ2 307 aa7.31□□□□□ -1.24
SYNE2-209ENST00000553308 RPL13AP3Q6NVV1 102 aa7.31□□□□□ -1.24
SYNE2-209ENST00000553308 HACD2Q6Y1H2 254 aa7.31□□□□□ -1.24
SYNE2-209ENST00000553308 THAP5Q7Z6K1 395 aa7.31□□□□□ -1.24
SYNE2-209ENST00000553308 ERI1Q8IV48 349 aaKnown RBP7.31□□□□□ -1.24
SYNE2-209ENST00000553308 TIGD4Q8IY51 512 aa7.31□□□□□ -1.24
SYNE2-209ENST00000553308 ZDHHC23Q8IYP9 409 aa7.31□□□□□ -1.24
SYNE2-209ENST00000553308 CD177Q8N6Q3 437 aa7.31□□□□□ -1.24
SYNE2-209ENST00000553308 RNF148Q8N7C7 305 aa7.31□□□□□ -1.24
SYNE2-209ENST00000553308 OR4Q3Q8NH05 313 aa7.31□□□□□ -1.24
SYNE2-209ENST00000553308 RPS4Y2Q8TD47 263 aa7.31□□□□□ -1.24
SYNE2-209ENST00000553308 SDSLQ96GA7 329 aa7.31□□□□□ -1.24
SYNE2-209ENST00000553308 PYURFQ96I23 114 aa7.31□□□□□ -1.24
SYNE2-209ENST00000553308 BTBD10Q9BSF8 475 aa7.31□□□□□ -1.24
SYNE2-209ENST00000553308 MUC13Q9H3R2 512 aa7.31□□□□□ -1.24
SYNE2-209ENST00000553308 RGCCQ9H4X1 137 aa7.31□□□□□ -1.24
SYNE2-209ENST00000553308 ABCB9Q9NP78 766 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms