RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 FAM3AP98173 230 aa12.19□□□□□ -0.46
RAB3IP-216ENST00000552199 DHODHQ02127 395 aa12.19□□□□□ -0.46
RAB3IP-216ENST00000552199 ZNF92Q03936 586 aa12.19□□□□□ -0.46
RAB3IP-216ENST00000552199 CNN3Q15417 329 aaKnown RBP12.19□□□□□ -0.46
RAB3IP-216ENST00000552199 MPPED2Q15777 294 aa12.19□□□□□ -0.46
RAB3IP-216ENST00000552199 CLVS2Q5SYC1 327 aa12.19□□□□□ -0.46
RAB3IP-216ENST00000552199 FTMTQ8N4E7 242 aa12.19□□□□□ -0.46
RAB3IP-216ENST00000552199 ZDHHC22Q8N966 263 aa12.19□□□□□ -0.46
RAB3IP-216ENST00000552199 OR4K15Q8NH41 348 aa12.19□□□□□ -0.46
RAB3IP-216ENST00000552199 C1QTNF5Q9BXJ0 243 aa12.19□□□□□ -0.46
RAB3IP-216ENST00000552199 PRDM14Q9GZV8 571 aa12.19□□□□□ -0.46
RAB3IP-216ENST00000552199 DEFB127Q9H1M4 99 aa12.19□□□□□ -0.46
RAB3IP-216ENST00000552199 ZNF552Q9H707 407 aaPredicted RBP12.19□□□□□ -0.46
RAB3IP-216ENST00000552199 ELL3Q9HB65 397 aaPredicted RBP12.19□□□□□ -0.46
RAB3IP-216ENST00000552199 ASCL3Q9NQ33 180 aa12.19□□□□□ -0.46
RAB3IP-216ENST00000552199 ZNF318Q5VUA4 2279 aa12.19□□□□□ -0.46
RAB3IP-216ENST00000552199 OTOGLQ3ZCN5 2332 aa12.19□□□□□ -0.46
RAB3IP-216ENST00000552199 FREM1Q5H8C1 2179 aa12.18□□□□□ -0.46
RAB3IP-216ENST00000552199 DNAJC13O75165 2243 aa12.18□□□□□ -0.46
RAB3IP-216ENST00000552199 XRCC2O43543 280 aa12.18□□□□□ -0.46
RAB3IP-216ENST00000552199 PMP2P02689 132 aa12.18□□□□□ -0.46
RAB3IP-216ENST00000552199 IFNA6P05013 189 aa12.18□□□□□ -0.46
RAB3IP-216ENST00000552199 TMEM225BP0DP42 221 aa12.18□□□□□ -0.46
RAB3IP-216ENST00000552199 BLVRBP30043 206 aaPredicted RBP12.18□□□□□ -0.46
RAB3IP-216ENST00000552199 FOXG1P55316 489 aaPredicted RBP12.18□□□□□ -0.46
RAB3IP-216ENST00000552199 PER3P56645 1201 aa12.18□□□□□ -0.46
RAB3IP-216ENST00000552199 H2BFSP57053 126 aa12.18□□□□□ -0.46
RAB3IP-216ENST00000552199 C9orf135Q5VTT2 229 aa12.18□□□□□ -0.46
RAB3IP-216ENST00000552199 VASH2Q86V25 355 aa12.18□□□□□ -0.46
RAB3IP-216ENST00000552199 SLC25A42Q86VD7 318 aa12.18□□□□□ -0.46
RAB3IP-216ENST00000552199 MCEMP1Q8IX19 187 aa12.18□□□□□ -0.46
RAB3IP-216ENST00000552199 C12orf45Q8N5I9 185 aaPredicted RBP12.18□□□□□ -0.46
RAB3IP-216ENST00000552199 TMEM178AQ8NBL3 297 aa12.18□□□□□ -0.46
RAB3IP-216ENST00000552199 APH1AQ96BI3 265 aa12.18□□□□□ -0.46
RAB3IP-216ENST00000552199 CYYR1Q96J86 154 aa12.18□□□□□ -0.46
RAB3IP-216ENST00000552199 PECRQ9BY49 303 aa12.18□□□□□ -0.46
RAB3IP-216ENST00000552199 LDAHQ9H6V9 325 aa12.18□□□□□ -0.46
RAB3IP-216ENST00000552199 HEXA-AS1Q9H8Q6 139 aa12.18□□□□□ -0.46
RAB3IP-216ENST00000552199 A0A096LPE4 126 aa12.17□□□□□ -0.46
RAB3IP-216ENST00000552199 FAM230AA0A1W2PPH8 454 aa12.17□□□□□ -0.46
RAB3IP-216ENST00000552199 A0A1W2PPZ6 126 aa12.17□□□□□ -0.46
RAB3IP-216ENST00000552199 F5H5P2 479 aa12.17□□□□□ -0.46
RAB3IP-216ENST00000552199 NKX2-8O15522 239 aa12.17□□□□□ -0.46
RAB3IP-216ENST00000552199 NRASP01111 189 aa12.17□□□□□ -0.46
RAB3IP-216ENST00000552199 EDN3P14138 238 aa12.17□□□□□ -0.46
RAB3IP-216ENST00000552199 CPT2P23786 658 aa12.17□□□□□ -0.46
RAB3IP-216ENST00000552199 HTR2BP41595 481 aa12.17□□□□□ -0.46
RAB3IP-216ENST00000552199 ZNF81P51508 661 aa12.17□□□□□ -0.46
RAB3IP-216ENST00000552199 PRSS12P56730 875 aa12.17□□□□□ -0.46
RAB3IP-216ENST00000552199 ARFRP1Q13795 201 aa12.17□□□□□ -0.46
RAB3IP-216ENST00000552199 MICBQ29980 383 aa12.17□□□□□ -0.46
RAB3IP-216ENST00000552199 ACTBL2Q562R1 376 aa12.17□□□□□ -0.46
RAB3IP-216ENST00000552199 RNFT1Q5M7Z0 435 aa12.17□□□□□ -0.46
RAB3IP-216ENST00000552199 COLCA1Q6ZS62 124 aa12.17□□□□□ -0.46
RAB3IP-216ENST00000552199 NUFIP2Q7Z417 695 aaKnown RBP12.17□□□□□ -0.46
RAB3IP-216ENST00000552199 OR8H1Q8NGG4 311 aa12.17□□□□□ -0.46
RAB3IP-216ENST00000552199 ST8SIA4Q92187 359 aa12.17□□□□□ -0.46
RAB3IP-216ENST00000552199 FBXW5Q969U6 566 aa12.17□□□□□ -0.46
RAB3IP-216ENST00000552199 SPSB4Q96A44 273 aa12.17□□□□□ -0.46
RAB3IP-216ENST00000552199 CPNE2Q96FN4 548 aaPredicted RBP12.17□□□□□ -0.46
RAB3IP-216ENST00000552199 WDYHV1Q96HA8 205 aa12.17□□□□□ -0.46
RAB3IP-216ENST00000552199 TMPRSS13Q9BYE2 586 aa12.17□□□□□ -0.46
RAB3IP-216ENST00000552199 METTL9Q9H1A3 318 aa12.17□□□□□ -0.46
RAB3IP-216ENST00000552199 OPN4Q9UHM6 478 aa12.17□□□□□ -0.46
RAB3IP-216ENST00000552199 CUL9Q8IWT3 2517 aa12.17□□□□□ -0.46
RAB3IP-216ENST00000552199 IGKV1-27A0A075B6S5 117 aa12.17□□□□□ -0.46
RAB3IP-216ENST00000552199 TRGV5A0A0B4J1U4 118 aa12.17□□□□□ -0.46
RAB3IP-216ENST00000552199 PLSCR5A0PG75 271 aa12.17□□□□□ -0.46
RAB3IP-216ENST00000552199 OR2AT4A6NND4 320 aa12.17□□□□□ -0.46
RAB3IP-216ENST00000552199 SLC22A5O76082 557 aa12.17□□□□□ -0.46
RAB3IP-216ENST00000552199 ZNF35P13682 527 aa12.17□□□□□ -0.46
RAB3IP-216ENST00000552199 RBP2P50120 134 aa12.17□□□□□ -0.46
RAB3IP-216ENST00000552199 DHRS2Q13268 280 aa12.17□□□□□ -0.46
RAB3IP-216ENST00000552199 ARL6IP1Q15041 203 aa12.17□□□□□ -0.46
RAB3IP-216ENST00000552199 OR8B8Q15620 311 aa12.17□□□□□ -0.46
RAB3IP-216ENST00000552199 VAX1Q5SQQ9 334 aa12.17□□□□□ -0.46
RAB3IP-216ENST00000552199 DCAF12L2Q5VW00 463 aa12.17□□□□□ -0.46
RAB3IP-216ENST00000552199 C17orf107Q6ZR85 190 aa12.17□□□□□ -0.46
RAB3IP-216ENST00000552199 LHFPL2Q6ZUX7 228 aa12.17□□□□□ -0.46
RAB3IP-216ENST00000552199 TMPRSS7Q7RTY8 843 aa12.17□□□□□ -0.46
RAB3IP-216ENST00000552199 BORCS8Q96FH0 119 aa12.17□□□□□ -0.46
RAB3IP-216ENST00000552199 TMEM165Q9HC07 324 aa12.17□□□□□ -0.46
RAB3IP-216ENST00000552199 LOC100509620A0A075B734 347 aa12.16□□□□□ -0.46
RAB3IP-216ENST00000552199 CA11O75493 328 aa12.16□□□□□ -0.46
RAB3IP-216ENST00000552199 HLA-HP01893 362 aa12.16□□□□□ -0.46
RAB3IP-216ENST00000552199 COX5BP10606 129 aa12.16□□□□□ -0.46
RAB3IP-216ENST00000552199 LIPCP11150 499 aa12.16□□□□□ -0.46
RAB3IP-216ENST00000552199 SSTR2P30874 369 aa12.16□□□□□ -0.46
RAB3IP-216ENST00000552199 TNFSF10P50591 281 aa12.16□□□□□ -0.46
RAB3IP-216ENST00000552199 SRSF6Q13247 344 aaKnown RBP12.16□□□□□ -0.46
RAB3IP-216ENST00000552199 GK2Q14410 553 aaPredicted RBP12.16□□□□□ -0.46
RAB3IP-216ENST00000552199 ZBTB37Q5TC79 503 aa12.16□□□□□ -0.46
RAB3IP-216ENST00000552199 TEX261Q6UWH6 196 aa12.16□□□□□ -0.46
RAB3IP-216ENST00000552199 ASCL4Q6XD76 172 aa12.16□□□□□ -0.46
RAB3IP-216ENST00000552199 HOGA1Q86XE5 327 aa12.16□□□□□ -0.46
RAB3IP-216ENST00000552199 ASB13Q8WXK3 278 aa12.16□□□□□ -0.46
RAB3IP-216ENST00000552199 Q96M66 194 aa12.16□□□□□ -0.46
RAB3IP-216ENST00000552199 ZDHHC11Q9H8X9 412 aa12.16□□□□□ -0.46
RAB3IP-216ENST00000552199 SPRR3Q9UBC9 169 aa12.16□□□□□ -0.46
RAB3IP-216ENST00000552199 U3KQ87 197 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms