RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 A6NIN4 97 aa5.56□□□□□ -1.52
PRPF40B-214ENST00000551320 ANKRD30BLA7E2S9 258 aa5.56□□□□□ -1.52
PRPF40B-214ENST00000551320 NUDT19A8MXV4 375 aa5.56□□□□□ -1.52
PRPF40B-214ENST00000551320 ARPC2O15144 300 aa5.56□□□□□ -1.52
PRPF40B-214ENST00000551320 MAGEB4O15481 346 aaPredicted RBP5.56□□□□□ -1.52
PRPF40B-214ENST00000551320 GMDSO60547 372 aa5.56□□□□□ -1.52
PRPF40B-214ENST00000551320 SELENOFO60613 162 aa5.56□□□□□ -1.52
PRPF40B-214ENST00000551320 PTBP3O95758 552 aaKnown RBP5.56□□□□□ -1.52
PRPF40B-214ENST00000551320 PAHP00439 452 aa5.56□□□□□ -1.52
PRPF40B-214ENST00000551320 PIPP12273 146 aaPredicted RBP5.56□□□□□ -1.52
PRPF40B-214ENST00000551320 H2AFXP16104 143 aaPredicted RBP5.56□□□□□ -1.52
PRPF40B-214ENST00000551320 CCL3L1P16619 93 aa5.56□□□□□ -1.52
PRPF40B-214ENST00000551320 SPI1P17947 270 aa5.56□□□□□ -1.52
PRPF40B-214ENST00000551320 GABRA5P31644 462 aa5.56□□□□□ -1.52
PRPF40B-214ENST00000551320 OTX1P32242 354 aaPredicted RBP5.56□□□□□ -1.52
PRPF40B-214ENST00000551320 ZNF121P58317 390 aaPredicted RBP5.56□□□□□ -1.52
PRPF40B-214ENST00000551320 PRDX4Q13162 271 aa5.56□□□□□ -1.52
PRPF40B-214ENST00000551320 KRT72Q14CN4 511 aa5.56□□□□□ -1.52
PRPF40B-214ENST00000551320 TIGD6Q17RP2 521 aa5.56□□□□□ -1.52
PRPF40B-214ENST00000551320 MICBQ29980 383 aa5.56□□□□□ -1.52
PRPF40B-214ENST00000551320 SLC36A3Q495N2 470 aa5.56□□□□□ -1.52
PRPF40B-214ENST00000551320 FBLN7Q53RD9 439 aa5.56□□□□□ -1.52
PRPF40B-214ENST00000551320 CEP78Q5JTW2 689 aa5.56□□□□□ -1.52
PRPF40B-214ENST00000551320 LDLRAD2Q5SZI1 272 aa5.56□□□□□ -1.52
PRPF40B-214ENST00000551320 TEX36Q5VZQ5 186 aa5.56□□□□□ -1.52
PRPF40B-214ENST00000551320 STUMQ69YW2 141 aa5.56□□□□□ -1.52
PRPF40B-214ENST00000551320 C11orf87Q6NUJ2 197 aa5.56□□□□□ -1.52
PRPF40B-214ENST00000551320 ZNF782Q6ZMW2 699 aaPredicted RBP5.56□□□□□ -1.52
PRPF40B-214ENST00000551320 ERI1Q8IV48 349 aaKnown RBP5.56□□□□□ -1.52
PRPF40B-214ENST00000551320 ZDHHC21Q8IVQ6 265 aa5.56□□□□□ -1.52
PRPF40B-214ENST00000551320 MKXQ8IYA7 352 aa5.56□□□□□ -1.52
PRPF40B-214ENST00000551320 FAM185AQ8N0U4 392 aa5.56□□□□□ -1.52
PRPF40B-214ENST00000551320 OR6N2Q8NGY6 317 aa5.56□□□□□ -1.52
PRPF40B-214ENST00000551320 GNPDA2Q8TDQ7 276 aa5.56□□□□□ -1.52
PRPF40B-214ENST00000551320 HPSE2Q8WWQ2 592 aa5.56□□□□□ -1.52
PRPF40B-214ENST00000551320 PIGCQ92535 297 aa5.56□□□□□ -1.52
PRPF40B-214ENST00000551320 PYURFQ96I23 114 aa5.56□□□□□ -1.52
PRPF40B-214ENST00000551320 WACQ9BTA9 647 aa5.56□□□□□ -1.52
PRPF40B-214ENST00000551320 DCTN5Q9BTE1 182 aa5.56□□□□□ -1.52
PRPF40B-214ENST00000551320 TSSK6Q9BXA6 273 aa5.56□□□□□ -1.52
PRPF40B-214ENST00000551320 DPAGT1Q9H3H5 408 aa5.56□□□□□ -1.52
PRPF40B-214ENST00000551320 ANKRD19PQ9H560 264 aa5.56□□□□□ -1.52
PRPF40B-214ENST00000551320 EFCAB1Q9HAE3 211 aa5.56□□□□□ -1.52
PRPF40B-214ENST00000551320 C19orf12Q9NSK7 152 aa5.56□□□□□ -1.52
PRPF40B-214ENST00000551320 HAO2Q9NYQ3 351 aa5.56□□□□□ -1.52
PRPF40B-214ENST00000551320 MRPL15Q9P015 296 aaKnown RBP5.56□□□□□ -1.52
PRPF40B-214ENST00000551320 ATPIF1Q9UII2 106 aa5.56□□□□□ -1.52
PRPF40B-214ENST00000551320 IGKV1D-17A0A075B6S4 117 aa5.55□□□□□ -1.52
PRPF40B-214ENST00000551320 hCG_38984A0A1B0GV85 526 aa5.55□□□□□ -1.52
PRPF40B-214ENST00000551320 A0A1B0GVI7 797 aa5.55□□□□□ -1.52
PRPF40B-214ENST00000551320 HTR3EA5X5Y0 456 aa5.55□□□□□ -1.52
PRPF40B-214ENST00000551320 SH2D7A6NKC9 451 aaPredicted RBP5.55□□□□□ -1.52
PRPF40B-214ENST00000551320 PRR32B1ATL7 298 aa5.55□□□□□ -1.52
PRPF40B-214ENST00000551320 ARPC3O15145 178 aa5.55□□□□□ -1.52
PRPF40B-214ENST00000551320 NDUFB3O43676 98 aa5.55□□□□□ -1.52
PRPF40B-214ENST00000551320 TSPAN9O75954 239 aa5.55□□□□□ -1.52
PRPF40B-214ENST00000551320 LIPFP07098 398 aa5.55□□□□□ -1.52
PRPF40B-214ENST00000551320 FBP1P09467 338 aa5.55□□□□□ -1.52
PRPF40B-214ENST00000551320 ATP6V1B2P21281 511 aa5.55□□□□□ -1.52
PRPF40B-214ENST00000551320 NAA10P41227 235 aaPredicted RBP5.55□□□□□ -1.52
PRPF40B-214ENST00000551320 TGM4P49221 684 aa5.55□□□□□ -1.52
PRPF40B-214ENST00000551320 ENTPD1P49961 510 aa5.55□□□□□ -1.52
PRPF40B-214ENST00000551320 NPY4RP50391 375 aa5.55□□□□□ -1.52
PRPF40B-214ENST00000551320 GPM6AP51674 278 aa5.55□□□□□ -1.52
PRPF40B-214ENST00000551320 CAPZA1P52907 286 aa5.55□□□□□ -1.52
PRPF40B-214ENST00000551320 MXRA7P84157 204 aa5.55□□□□□ -1.52
PRPF40B-214ENST00000551320 TSPAN31Q12999 210 aa5.55□□□□□ -1.52
PRPF40B-214ENST00000551320 C2orf68Q2NKX9 166 aa5.55□□□□□ -1.52
PRPF40B-214ENST00000551320 LINC01590Q5TEZ4 76 aa5.55□□□□□ -1.52
PRPF40B-214ENST00000551320 DRAM2Q6UX65 266 aa5.55□□□□□ -1.52
PRPF40B-214ENST00000551320 PRSS45Q7RTY3 260 aa5.55□□□□□ -1.52
PRPF40B-214ENST00000551320 AQP11Q8NBQ7 271 aa5.55□□□□□ -1.52
PRPF40B-214ENST00000551320 TMEM185AQ8NFB2 350 aa5.55□□□□□ -1.52
PRPF40B-214ENST00000551320 BBS1Q8NFJ9 593 aa5.55□□□□□ -1.52
PRPF40B-214ENST00000551320 PIFOQ8TCI5 191 aa5.55□□□□□ -1.52
PRPF40B-214ENST00000551320 MRAPQ8TCY5 172 aa5.55□□□□□ -1.52
PRPF40B-214ENST00000551320 SGCDQ92629 289 aa5.55□□□□□ -1.52
PRPF40B-214ENST00000551320 ERGIC1Q969X5 290 aa5.55□□□□□ -1.52
PRPF40B-214ENST00000551320 PGAM5Q96HS1 289 aa5.55□□□□□ -1.52
PRPF40B-214ENST00000551320 RNF170Q96K19 258 aa5.55□□□□□ -1.52
PRPF40B-214ENST00000551320 CDRT15Q96T59 188 aa5.55□□□□□ -1.52
PRPF40B-214ENST00000551320 HOPXQ9BPY8 73 aaPredicted RBP5.55□□□□□ -1.52
PRPF40B-214ENST00000551320 SIKE1Q9BRV8 207 aa5.55□□□□□ -1.52
PRPF40B-214ENST00000551320 ABHD6Q9BV23 337 aa5.55□□□□□ -1.52
PRPF40B-214ENST00000551320 NDEL1Q9GZM8 345 aa5.55□□□□□ -1.52
PRPF40B-214ENST00000551320 OR51V1Q9H2C8 321 aa5.55□□□□□ -1.52
PRPF40B-214ENST00000551320 C16orf95Q9H693 158 aa5.55□□□□□ -1.52
PRPF40B-214ENST00000551320 TBC1D23Q9NUY8 699 aa5.55□□□□□ -1.52
PRPF40B-214ENST00000551320 ARL8BQ9NVJ2 186 aa5.55□□□□□ -1.52
PRPF40B-214ENST00000551320 ABCD2Q9UBJ2 740 aa5.55□□□□□ -1.52
PRPF40B-214ENST00000551320 SLC25A10Q9UBX3 287 aaPredicted RBP5.55□□□□□ -1.52
PRPF40B-214ENST00000551320 MAB21L2Q9Y586 359 aa5.55□□□□□ -1.52
PRPF40B-214ENST00000551320 KPTNQ9Y664 436 aa5.55□□□□□ -1.52
PRPF40B-214ENST00000551320 CDH10Q9Y6N8 788 aa5.55□□□□□ -1.52
PRPF40B-214ENST00000551320 H0YAE9 185 aa5.54□□□□□ -1.52
PRPF40B-214ENST00000551320 M0R129 80 aa5.54□□□□□ -1.52
PRPF40B-214ENST00000551320 TNFRSF11BO00300 401 aa5.54□□□□□ -1.52
PRPF40B-214ENST00000551320 PIN1P1O15428 100 aa5.54□□□□□ -1.52
PRPF40B-214ENST00000551320 FSTL3O95633 263 aa5.54□□□□□ -1.52
PRPF40B-214ENST00000551320 MPIG6BO95866 241 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms