RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 ACTA2P62736 377 aa10.39□□□□□ -0.75
SNRPF-203ENST00000551316 ACTG2P63267 376 aa10.39□□□□□ -0.75
SNRPF-203ENST00000551316 ACTC1P68032 377 aa10.39□□□□□ -0.75
SNRPF-203ENST00000551316 ACTA1P68133 377 aa10.39□□□□□ -0.75
SNRPF-203ENST00000551316 KRR1Q13601 381 aaKnown RBP10.39□□□□□ -0.75
SNRPF-203ENST00000551316 MINOS1Q5TGZ0 78 aa10.39□□□□□ -0.75
SNRPF-203ENST00000551316 ZNF429Q86V71 674 aa10.39□□□□□ -0.75
SNRPF-203ENST00000551316 OR10Z1Q8NGY1 313 aa10.39□□□□□ -0.75
SNRPF-203ENST00000551316 OR2T27Q8NH04 317 aa10.39□□□□□ -0.75
SNRPF-203ENST00000551316 DCUN1D4Q92564 292 aa10.39□□□□□ -0.75
SNRPF-203ENST00000551316 ZNF570Q96NI8 536 aa10.39□□□□□ -0.75
SNRPF-203ENST00000551316 TMEM38AQ9H6F2 299 aa10.39□□□□□ -0.75
SNRPF-203ENST00000551316 GNB4Q9HAV0 340 aa10.39□□□□□ -0.75
SNRPF-203ENST00000551316 PNPOQ9NVS9 261 aa10.39□□□□□ -0.75
SNRPF-203ENST00000551316 VAPAQ9P0L0 249 aa10.39□□□□□ -0.75
SNRPF-203ENST00000551316 MINOS1-NBL1R4GNA1 71 aa10.39□□□□□ -0.75
SNRPF-203ENST00000551316 TRBV5-3A0A0A0MS03 114 aa10.38□□□□□ -0.75
SNRPF-203ENST00000551316 MMP23AO75900 390 aa10.38□□□□□ -0.75
SNRPF-203ENST00000551316 IFI30P13284 250 aa10.38□□□□□ -0.75
SNRPF-203ENST00000551316 GNB1P62873 340 aa10.38□□□□□ -0.75
SNRPF-203ENST00000551316 PIN1Q13526 163 aaPredicted RBP10.38□□□□□ -0.75
SNRPF-203ENST00000551316 LCN8Q6JVE9 175 aa10.38□□□□□ -0.75
SNRPF-203ENST00000551316 TRMT10CQ7L0Y3 403 aaKnown RBP10.38□□□□□ -0.75
SNRPF-203ENST00000551316 THAP5Q7Z6K1 395 aa10.38□□□□□ -0.75
SNRPF-203ENST00000551316 FAM71E2Q8N5Q1 922 aa10.38□□□□□ -0.75
SNRPF-203ENST00000551316 DRAM1Q8N682 238 aa10.38□□□□□ -0.75
SNRPF-203ENST00000551316 C5orf56Q8N8D9 126 aa10.38□□□□□ -0.75
SNRPF-203ENST00000551316 C4orf3Q8WVX3 66 aa10.38□□□□□ -0.75
SNRPF-203ENST00000551316 HPSE2Q8WWQ2 592 aa10.38□□□□□ -0.75
SNRPF-203ENST00000551316 TSPYL1Q9H0U9 437 aa10.38□□□□□ -0.75
SNRPF-203ENST00000551316 MOB4Q9Y3A3 225 aa10.38□□□□□ -0.75
SNRPF-203ENST00000551316 RHBDD3Q9Y3P4 386 aa10.38□□□□□ -0.75
SNRPF-203ENST00000551316 HSPE1-MOB4S4R3N1 261 aa10.38□□□□□ -0.75
SNRPF-203ENST00000551316 ANKRD30BLA7E2S9 258 aa10.37□□□□□ -0.75
SNRPF-203ENST00000551316 M0QX08 132 aa10.37□□□□□ -0.75
SNRPF-203ENST00000551316 SERPINB7O75635 380 aa10.37□□□□□ -0.75
SNRPF-203ENST00000551316 GLRA1P23415 457 aa10.37□□□□□ -0.75
SNRPF-203ENST00000551316 FAM3AP98173 230 aa10.37□□□□□ -0.75
SNRPF-203ENST00000551316 MZT1Q08AG7 82 aa10.37□□□□□ -0.75
SNRPF-203ENST00000551316 SLC16A9Q7RTY1 509 aa10.37□□□□□ -0.75
SNRPF-203ENST00000551316 LYPD6Q86Y78 171 aa10.37□□□□□ -0.75
SNRPF-203ENST00000551316 CNPY4Q8N129 248 aa10.37□□□□□ -0.75
SNRPF-203ENST00000551316 ZBTB9Q96C00 473 aa10.37□□□□□ -0.75
SNRPF-203ENST00000551316 BPIFA2Q96DR5 249 aa10.37□□□□□ -0.75
SNRPF-203ENST00000551316 FAM46AQ96IP4 442 aaKnown RBP10.37□□□□□ -0.75
SNRPF-203ENST00000551316 ZNF488Q96MN9 340 aa10.37□□□□□ -0.75
SNRPF-203ENST00000551316 MED31Q9Y3C7 131 aa10.37□□□□□ -0.75
SNRPF-203ENST00000551316 N6AMT1Q9Y5N5 214 aa10.37□□□□□ -0.75
SNRPF-203ENST00000551316 FAM172BPA6NC97 362 aa10.36□□□□□ -0.75
SNRPF-203ENST00000551316 MAGEA13PA6NCF6 341 aa10.36□□□□□ -0.75
SNRPF-203ENST00000551316 CDC42EP2O14613 210 aa10.36□□□□□ -0.75
SNRPF-203ENST00000551316 SLC22A2O15244 555 aa10.36□□□□□ -0.75
SNRPF-203ENST00000551316 TIPRLO75663 272 aa10.36□□□□□ -0.75
SNRPF-203ENST00000551316 OTX1P32242 354 aaPredicted RBP10.36□□□□□ -0.75
SNRPF-203ENST00000551316 CENPAP49450 140 aa10.36□□□□□ -0.75
SNRPF-203ENST00000551316 TPTEP56180 551 aa10.36□□□□□ -0.75
SNRPF-203ENST00000551316 UTF1Q5T230 341 aa10.36□□□□□ -0.75
SNRPF-203ENST00000551316 LRIF1Q5T3J3 769 aa10.36□□□□□ -0.75
SNRPF-203ENST00000551316 AGBL2Q5U5Z8 902 aa10.36□□□□□ -0.75
SNRPF-203ENST00000551316 MSANTD1Q6ZTZ1 278 aa10.36□□□□□ -0.75
SNRPF-203ENST00000551316 COMMD1Q8N668 190 aa10.36□□□□□ -0.75
SNRPF-203ENST00000551316 RNF152Q8N8N0 203 aa10.36□□□□□ -0.75
SNRPF-203ENST00000551316 OR5B12Q96R08 314 aa10.36□□□□□ -0.75
SNRPF-203ENST00000551316 GRHPRQ9UBQ7 328 aa10.36□□□□□ -0.75
SNRPF-203ENST00000551316 RIMS3Q9UJD0 308 aa10.36□□□□□ -0.75
SNRPF-203ENST00000551316 hCG_38984A0A1B0GV85 526 aa10.35□□□□□ -0.75
SNRPF-203ENST00000551316 CXorf65A6NEN9 183 aa10.35□□□□□ -0.75
SNRPF-203ENST00000551316 RFPL4AA6NLU0 287 aa10.35□□□□□ -0.75
SNRPF-203ENST00000551316 C12orf77C9JDV5 145 aa10.35□□□□□ -0.75
SNRPF-203ENST00000551316 RFPL4AL1F8VTS6 287 aa10.35□□□□□ -0.75
SNRPF-203ENST00000551316 SOCS2O14508 198 aa10.35□□□□□ -0.75
SNRPF-203ENST00000551316 XKRYO14609 159 aa10.35□□□□□ -0.75
SNRPF-203ENST00000551316 OVOL1O14753 267 aa10.35□□□□□ -0.75
SNRPF-203ENST00000551316 MTRF1O75570 445 aaKnown RBP10.35□□□□□ -0.75
SNRPF-203ENST00000551316 CD14P08571 375 aa10.35□□□□□ -0.75
SNRPF-203ENST00000551316 ZNF728P0DKX0 622 aa10.35□□□□□ -0.75
SNRPF-203ENST00000551316 ARSBP15848 533 aa10.35□□□□□ -0.75
SNRPF-203ENST00000551316 GNALP38405 381 aa10.35□□□□□ -0.75
SNRPF-203ENST00000551316 CDKN2AP42771 156 aaKnown RBP10.35□□□□□ -0.75
SNRPF-203ENST00000551316 SLURP1P55000 103 aa10.35□□□□□ -0.75
SNRPF-203ENST00000551316 TAS2R41P59536 307 aa10.35□□□□□ -0.75
SNRPF-203ENST00000551316 ABCE1P61221 599 aaKnown RBP10.35□□□□□ -0.75
SNRPF-203ENST00000551316 SLC35B1P78383 322 aa10.35□□□□□ -0.75
SNRPF-203ENST00000551316 CFHR3Q02985 330 aa10.35□□□□□ -0.75
SNRPF-203ENST00000551316 GABPB1Q06547 395 aaPredicted RBP10.35□□□□□ -0.75
SNRPF-203ENST00000551316 TEX38Q6PEX7 206 aa10.35□□□□□ -0.75
SNRPF-203ENST00000551316 SLC35E3Q7Z769 313 aa10.35□□□□□ -0.75
SNRPF-203ENST00000551316 ZNF575Q86XF7 245 aa10.35□□□□□ -0.75
SNRPF-203ENST00000551316 SGPP2Q8IWX5 399 aa10.35□□□□□ -0.75
SNRPF-203ENST00000551316 BATF2Q8N1L9 274 aa10.35□□□□□ -0.75
SNRPF-203ENST00000551316 ARPC1AQ92747 370 aa10.35□□□□□ -0.75
SNRPF-203ENST00000551316 DLX4Q92988 240 aaPredicted RBP10.35□□□□□ -0.75
SNRPF-203ENST00000551316 SPSB4Q96A44 273 aa10.35□□□□□ -0.75
SNRPF-203ENST00000551316 PAPOLGQ9BWT3 736 aaKnown RBP10.35□□□□□ -0.75
SNRPF-203ENST00000551316 KRCC1Q9NPI7 259 aaPredicted RBP10.35□□□□□ -0.75
SNRPF-203ENST00000551316 CYB5R1Q9UHQ9 305 aa10.35□□□□□ -0.75
SNRPF-203ENST00000551316 RAP2CQ9Y3L5 183 aa10.35□□□□□ -0.75
SNRPF-203ENST00000551316 DNAH5Q8TE73 4624 aa10.34□□□□□ -0.75
SNRPF-203ENST00000551316 hCG_1809904A0A1W2PP81 198 aa10.34□□□□□ -0.75
SNRPF-203ENST00000551316 A0A1W2PPE2 198 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms