RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 TANC2Q9HCD6 1990 aa13.68□□□□□ -0.22
CHMP1A-209ENST00000550872 ISPDA4D126 451 aa13.67□□□□□ -0.22
CHMP1A-209ENST00000550872 LRP5LA4QPB2 252 aa13.67□□□□□ -0.22
CHMP1A-209ENST00000550872 ANKRD61A6NGH8 418 aa13.67□□□□□ -0.22
CHMP1A-209ENST00000550872 TMEM210A6NLX4 147 aa13.67□□□□□ -0.22
CHMP1A-209ENST00000550872 ZNF732B4DXR9 585 aa13.67□□□□□ -0.22
CHMP1A-209ENST00000550872 SERPINA3P01011 423 aa13.67□□□□□ -0.22
CHMP1A-209ENST00000550872 MT-ND2P03891 347 aa13.67□□□□□ -0.22
CHMP1A-209ENST00000550872 ZNF20P17024 532 aa13.67□□□□□ -0.22
CHMP1A-209ENST00000550872 THBS2P35442 1172 aa13.67□□□□□ -0.22
CHMP1A-209ENST00000550872 GPM6AP51674 278 aa13.67□□□□□ -0.22
CHMP1A-209ENST00000550872 CHN2P52757 468 aa13.67□□□□□ -0.22
CHMP1A-209ENST00000550872 TAS2R43P59537 309 aa13.67□□□□□ -0.22
CHMP1A-209ENST00000550872 ZNF181Q2M3W8 571 aa13.67□□□□□ -0.22
CHMP1A-209ENST00000550872 TMEM42Q69YG0 159 aa13.67□□□□□ -0.22
CHMP1A-209ENST00000550872 ZNF826PQ6ZT77 177 aa13.67□□□□□ -0.22
CHMP1A-209ENST00000550872 C1orf87Q8N0U7 546 aa13.67□□□□□ -0.22
CHMP1A-209ENST00000550872 ZFP41Q8N8Y5 198 aa13.67□□□□□ -0.22
CHMP1A-209ENST00000550872 OR51A4Q8NGJ6 313 aa13.67□□□□□ -0.22
CHMP1A-209ENST00000550872 OR13C3Q8NGS6 347 aa13.67□□□□□ -0.22
CHMP1A-209ENST00000550872 Q8TCH9 128 aa13.67□□□□□ -0.22
CHMP1A-209ENST00000550872 FGGYQ96C11 551 aa13.67□□□□□ -0.22
CHMP1A-209ENST00000550872 C10orf35Q96D05 121 aa13.67□□□□□ -0.22
CHMP1A-209ENST00000550872 MND1Q9BWT6 205 aa13.67□□□□□ -0.22
CHMP1A-209ENST00000550872 FGF23Q9GZV9 251 aaPredicted RBP13.67□□□□□ -0.22
CHMP1A-209ENST00000550872 RNF7Q9UBF6 113 aa13.67□□□□□ -0.22
CHMP1A-209ENST00000550872 CR1P17927 2039 aa13.67□□□□□ -0.22
CHMP1A-209ENST00000550872 ABCA1O95477 2261 aa13.67□□□□□ -0.22
CHMP1A-209ENST00000550872 hCG_1807616A0A1W2PRN6 198 aa13.66□□□□□ -0.22
CHMP1A-209ENST00000550872 WNT9BO14905 357 aa13.66□□□□□ -0.22
CHMP1A-209ENST00000550872 ZNF205O95201 554 aa13.66□□□□□ -0.22
CHMP1A-209ENST00000550872 GNG3P63215 75 aa13.66□□□□□ -0.22
CHMP1A-209ENST00000550872 ZNF154Q13106 437 aa13.66□□□□□ -0.22
CHMP1A-209ENST00000550872 IRF3Q14653 427 aa13.66□□□□□ -0.22
CHMP1A-209ENST00000550872 C11orf53Q8IXP5 236 aa13.66□□□□□ -0.22
CHMP1A-209ENST00000550872 BOLLQ8N9W6 283 aaKnown RBP13.66□□□□□ -0.22
CHMP1A-209ENST00000550872 RPS4Y2Q8TD47 263 aa13.66□□□□□ -0.22
CHMP1A-209ENST00000550872 RPL3LQ92901 407 aaKnown RBP13.66□□□□□ -0.22
CHMP1A-209ENST00000550872 ADAT3Q96EY9 351 aaPredicted RBP13.66□□□□□ -0.22
CHMP1A-209ENST00000550872 OR5B21A6NL26 309 aa13.65□□□□□ -0.22
CHMP1A-209ENST00000550872 GATBO75879 557 aaKnown RBP13.65□□□□□ -0.22
CHMP1A-209ENST00000550872 SPHARQ15513 63 aa13.65□□□□□ -0.22
CHMP1A-209ENST00000550872 FAM76BQ5HYJ3 339 aa13.65□□□□□ -0.22
CHMP1A-209ENST00000550872 FAM201AQ5SY85 155 aa13.65□□□□□ -0.22
CHMP1A-209ENST00000550872 DMKNQ6E0U4 476 aaPredicted RBP13.65□□□□□ -0.22
CHMP1A-209ENST00000550872 PRSS48Q7RTY5 328 aa13.65□□□□□ -0.22
CHMP1A-209ENST00000550872 CLDND2Q8NHS1 167 aa13.65□□□□□ -0.22
CHMP1A-209ENST00000550872 TSEN15Q8WW01 171 aaKnown RBP13.65□□□□□ -0.22
CHMP1A-209ENST00000550872 PP6455Q8WZ26 134 aa13.65□□□□□ -0.22
CHMP1A-209ENST00000550872 SMIM19Q96E16 107 aa13.65□□□□□ -0.22
CHMP1A-209ENST00000550872 POM121Q96HA1 1249 aa13.65□□□□□ -0.22
CHMP1A-209ENST00000550872 OR5M11Q96RB7 305 aa13.65□□□□□ -0.22
CHMP1A-209ENST00000550872 YTHDF1Q9BYJ9 559 aaKnown RBP13.65□□□□□ -0.22
CHMP1A-209ENST00000550872 CHST5Q9GZS9 411 aa13.65□□□□□ -0.22
CHMP1A-209ENST00000550872 SLC7A11Q9UPY5 501 aa13.65□□□□□ -0.22
CHMP1A-209ENST00000550872 DHDHQ9UQ10 334 aa13.65□□□□□ -0.22
CHMP1A-209ENST00000550872 ZNF281Q9Y2X9 895 aa13.65□□□□□ -0.22
CHMP1A-209ENST00000550872 PPIAL4EA0A075B759 164 aa13.64□□□□□ -0.23
CHMP1A-209ENST00000550872 PNMA8CA0A1B0GUJ8 204 aa13.64□□□□□ -0.23
CHMP1A-209ENST00000550872 PPIAL4DF5H284 164 aa13.64□□□□□ -0.23
CHMP1A-209ENST00000550872 CDIPTO14735 213 aa13.64□□□□□ -0.23
CHMP1A-209ENST00000550872 IGHV2-70P01814 119 aa13.64□□□□□ -0.23
CHMP1A-209ENST00000550872 PPIAL4FP0DN26 164 aa13.64□□□□□ -0.23
CHMP1A-209ENST00000550872 CELP19835 753 aa13.64□□□□□ -0.23
CHMP1A-209ENST00000550872 BTG1P62324 171 aa13.64□□□□□ -0.23
CHMP1A-209ENST00000550872 ZMYND11Q15326 602 aa13.64□□□□□ -0.23
CHMP1A-209ENST00000550872 MED22Q15528 200 aa13.64□□□□□ -0.23
CHMP1A-209ENST00000550872 UBE2V2Q15819 145 aa13.64□□□□□ -0.23
CHMP1A-209ENST00000550872 TMEM249Q2WGJ8 235 aa13.64□□□□□ -0.23
CHMP1A-209ENST00000550872 WDR82Q6UXN9 313 aa13.64□□□□□ -0.23
CHMP1A-209ENST00000550872 LRRC28Q86X40 367 aaPredicted RBP13.64□□□□□ -0.23
CHMP1A-209ENST00000550872 SCCPDHQ8NBX0 429 aa13.64□□□□□ -0.23
CHMP1A-209ENST00000550872 TRMT10AQ8TBZ6 339 aaKnown RBP13.64□□□□□ -0.23
CHMP1A-209ENST00000550872 GPR148Q8TDV2 347 aa13.64□□□□□ -0.23
CHMP1A-209ENST00000550872 NPRL2Q8WTW4 380 aa13.64□□□□□ -0.23
CHMP1A-209ENST00000550872 LRRC29Q8WV35 223 aa13.64□□□□□ -0.23
CHMP1A-209ENST00000550872 RGP1Q92546 391 aaPredicted RBP13.64□□□□□ -0.23
CHMP1A-209ENST00000550872 GHSRQ92847 366 aa13.64□□□□□ -0.23
CHMP1A-209ENST00000550872 SMR3AQ99954 134 aa13.64□□□□□ -0.23
CHMP1A-209ENST00000550872 GAL3ST1Q99999 423 aa13.64□□□□□ -0.23
CHMP1A-209ENST00000550872 TLNRD1Q9H1K6 362 aa13.64□□□□□ -0.23
CHMP1A-209ENST00000550872 OR51I2Q9H344 312 aa13.64□□□□□ -0.23
CHMP1A-209ENST00000550872 METTL17Q9H7H0 456 aaPredicted RBP13.64□□□□□ -0.23
CHMP1A-209ENST00000550872 LSM2Q9Y333 95 aaKnown RBP13.64□□□□□ -0.23
CHMP1A-209ENST00000550872 PPIAL4AQ9Y536 164 aa13.64□□□□□ -0.23
CHMP1A-209ENST00000550872 YLPM1P49750 1951 aaKnown RBP13.63□□□□□ -0.23
CHMP1A-209ENST00000550872 TLN2Q9Y4G6 2542 aa13.63□□□□□ -0.23
CHMP1A-209ENST00000550872 FAM230AA0A1W2PPH8 454 aa13.63□□□□□ -0.23
CHMP1A-209ENST00000550872 PQLC2LA1A4F0 135 aa13.63□□□□□ -0.23
CHMP1A-209ENST00000550872 HEXAP06865 529 aa13.63□□□□□ -0.23
CHMP1A-209ENST00000550872 ATF1P18846 271 aa13.63□□□□□ -0.23
CHMP1A-209ENST00000550872 IL2RGP31785 369 aa13.63□□□□□ -0.23
CHMP1A-209ENST00000550872 MDH2P40926 338 aaKnown RBP13.63□□□□□ -0.23
CHMP1A-209ENST00000550872 MAP2K4P45985 399 aa13.63□□□□□ -0.23
CHMP1A-209ENST00000550872 SOX2P48431 317 aa13.63□□□□□ -0.23
CHMP1A-209ENST00000550872 GABARAPL2P60520 117 aa13.63□□□□□ -0.23
CHMP1A-209ENST00000550872 BDH1Q02338 343 aa13.63□□□□□ -0.23
CHMP1A-209ENST00000550872 ACSM1Q08AH1 577 aa13.63□□□□□ -0.23
CHMP1A-209ENST00000550872 DOC2BQ14184 412 aa13.63□□□□□ -0.23
CHMP1A-209ENST00000550872 CNN3Q15417 329 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms