RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 ITFG2Q969R8 447 aa11.52□□□□□ -0.57
TROAP-213ENST00000550709 C1orf159Q96HA4 380 aa11.52□□□□□ -0.57
TROAP-213ENST00000550709 TMEM246Q9BRR3 403 aa11.52□□□□□ -0.57
TROAP-213ENST00000550709 JAM3Q9BX67 310 aa11.52□□□□□ -0.57
TROAP-213ENST00000550709 HIF1ANQ9NWT6 349 aa11.52□□□□□ -0.57
TROAP-213ENST00000550709 PSORS1C1Q9UIG5 152 aa11.52□□□□□ -0.57
TROAP-213ENST00000550709 EXOSC1Q9Y3B2 195 aaKnown RBP11.52□□□□□ -0.57
TROAP-213ENST00000550709 ANKRD61A6NGH8 418 aa11.51□□□□□ -0.57
TROAP-213ENST00000550709 TMEM210A6NLX4 147 aa11.51□□□□□ -0.57
TROAP-213ENST00000550709 OR4C45A6NMZ5 311 aa11.51□□□□□ -0.57
TROAP-213ENST00000550709 PTGES3LE9PB15 166 aa11.51□□□□□ -0.57
TROAP-213ENST00000550709 LGALS8O00214 317 aa11.51□□□□□ -0.57
TROAP-213ENST00000550709 PLPP2O43688 288 aa11.51□□□□□ -0.57
TROAP-213ENST00000550709 RPS2P15880 293 aaKnown RBP11.51□□□□□ -0.57
TROAP-213ENST00000550709 CCR9P51686 369 aa11.51□□□□□ -0.57
TROAP-213ENST00000550709 SEC61A1P61619 476 aaKnown RBP11.51□□□□□ -0.57
TROAP-213ENST00000550709 LCN2P80188 198 aa11.51□□□□□ -0.57
TROAP-213ENST00000550709 MED21Q13503 144 aa11.51□□□□□ -0.57
TROAP-213ENST00000550709 ZNF404Q494X3 552 aa11.51□□□□□ -0.57
TROAP-213ENST00000550709 C6orf141Q5SZD1 244 aa11.51□□□□□ -0.57
TROAP-213ENST00000550709 TMEM42Q69YG0 159 aa11.51□□□□□ -0.57
TROAP-213ENST00000550709 WDR82Q6UXN9 313 aa11.51□□□□□ -0.57
TROAP-213ENST00000550709 KRT74Q7RTS7 529 aa11.51□□□□□ -0.57
TROAP-213ENST00000550709 GLCCI1Q86VQ1 547 aa11.51□□□□□ -0.57
TROAP-213ENST00000550709 SCCPDHQ8NBX0 429 aa11.51□□□□□ -0.57
TROAP-213ENST00000550709 OR5A2Q8NGI9 324 aa11.51□□□□□ -0.57
TROAP-213ENST00000550709 OR51F2Q8NH61 342 aa11.51□□□□□ -0.57
TROAP-213ENST00000550709 TRMT10AQ8TBZ6 339 aaKnown RBP11.51□□□□□ -0.57
TROAP-213ENST00000550709 GATAD2BQ8WXI9 593 aa11.51□□□□□ -0.57
TROAP-213ENST00000550709 FGGYQ96C11 551 aa11.51□□□□□ -0.57
TROAP-213ENST00000550709 SEH1LQ96EE3 360 aa11.51□□□□□ -0.57
TROAP-213ENST00000550709 PDCD1LG2Q9BQ51 273 aa11.51□□□□□ -0.57
TROAP-213ENST00000550709 OR51I2Q9H344 312 aa11.51□□□□□ -0.57
TROAP-213ENST00000550709 PATZ1Q9HBE1 687 aaKnown RBP11.51□□□□□ -0.57
TROAP-213ENST00000550709 ERVK-18Q9QC07 812 aa11.51□□□□□ -0.57
TROAP-213ENST00000550709 CAB39Q9Y376 341 aaPredicted RBP11.51□□□□□ -0.57
TROAP-213ENST00000550709 TRBV2A0A0J9YWF9 115 aa11.5□□□□□ -0.57
TROAP-213ENST00000550709 FAM230AA0A1W2PPH8 454 aa11.5□□□□□ -0.57
TROAP-213ENST00000550709 OOEPA6NGQ2 149 aa11.5□□□□□ -0.57
TROAP-213ENST00000550709 DHRS7CA6NNS2 312 aa11.5□□□□□ -0.57
TROAP-213ENST00000550709 PHF1O43189 567 aaPredicted RBP11.5□□□□□ -0.57
TROAP-213ENST00000550709 AKR7A2O43488 359 aa11.5□□□□□ -0.57
TROAP-213ENST00000550709 ZFPL1O95159 310 aa11.5□□□□□ -0.57
TROAP-213ENST00000550709 ZNF20P17024 532 aa11.5□□□□□ -0.57
TROAP-213ENST00000550709 ZFP36P26651 326 aaKnown RBP11.5□□□□□ -0.57
TROAP-213ENST00000550709 C21orf33P30042 268 aaPredicted RBP11.5□□□□□ -0.57
TROAP-213ENST00000550709 HSPA13P48723 471 aa11.5□□□□□ -0.57
TROAP-213ENST00000550709 XAF1Q6GPH4 301 aa11.5□□□□□ -0.57
TROAP-213ENST00000550709 HAGHLQ6PII5 290 aaPredicted RBP11.5□□□□□ -0.57
TROAP-213ENST00000550709 LYPD2Q6UXB3 125 aa11.5□□□□□ -0.57
TROAP-213ENST00000550709 Q6ZSR3 168 aa11.5□□□□□ -0.57
TROAP-213ENST00000550709 IL17RELQ6ZVW7 336 aa11.5□□□□□ -0.57
TROAP-213ENST00000550709 GCSAMQ8N6F7 178 aa11.5□□□□□ -0.57
TROAP-213ENST00000550709 CCDC54Q8NEL0 328 aa11.5□□□□□ -0.57
TROAP-213ENST00000550709 OR51A4Q8NGJ6 313 aa11.5□□□□□ -0.57
TROAP-213ENST00000550709 OR13C3Q8NGS6 347 aa11.5□□□□□ -0.57
TROAP-213ENST00000550709 OR5AK2Q8NH90 309 aa11.5□□□□□ -0.57
TROAP-213ENST00000550709 TMEM186Q96B77 213 aa11.5□□□□□ -0.57
TROAP-213ENST00000550709 ADAT3Q96EY9 351 aaPredicted RBP11.5□□□□□ -0.57
TROAP-213ENST00000550709 TLNRD1Q9H1K6 362 aa11.5□□□□□ -0.57
TROAP-213ENST00000550709 PLCXD1Q9NUJ7 323 aa11.5□□□□□ -0.57
TROAP-213ENST00000550709 CNOT2Q9NZN8 540 aaKnown RBP11.5□□□□□ -0.57
TROAP-213ENST00000550709 HHLA2Q9UM44 414 aa11.5□□□□□ -0.57
TROAP-213ENST00000550709 ZFHX3Q15911 3703 aa11.49□□□□□ -0.57
TROAP-213ENST00000550709 NIPBLQ6KC79 2804 aaeCLIP11.49□□□□□ -0.57
TROAP-213ENST00000550709 CHD3Q12873 2000 aaKnown RBP11.49□□□□□ -0.57
TROAP-213ENST00000550709 TRAV38-1A0A0B4J264 116 aa11.49□□□□□ -0.57
TROAP-213ENST00000550709 OR5B21A6NL26 309 aa11.49□□□□□ -0.57
TROAP-213ENST00000550709 RHBDL1O75783 438 aa11.49□□□□□ -0.57
TROAP-213ENST00000550709 SERPINA3P01011 423 aa11.49□□□□□ -0.57
TROAP-213ENST00000550709 LHBP01229 141 aa11.49□□□□□ -0.57
TROAP-213ENST00000550709 GYPAP02724 150 aa11.49□□□□□ -0.57
TROAP-213ENST00000550709 ISG15P05161 165 aa11.49□□□□□ -0.57
TROAP-213ENST00000550709 WNT2P09544 360 aa11.49□□□□□ -0.57
TROAP-213ENST00000550709 CCDC159P0C7I6 412 aa11.49□□□□□ -0.57
TROAP-213ENST00000550709 PIPP12273 146 aaPredicted RBP11.49□□□□□ -0.57
TROAP-213ENST00000550709 ZNF12P17014 697 aa11.49□□□□□ -0.57
TROAP-213ENST00000550709 MYF6P23409 242 aa11.49□□□□□ -0.57
TROAP-213ENST00000550709 VHLP40337 213 aa11.49□□□□□ -0.57
TROAP-213ENST00000550709 TGM4P49221 684 aa11.49□□□□□ -0.57
TROAP-213ENST00000550709 DVL1P1P54792 670 aaPredicted RBP11.49□□□□□ -0.57
TROAP-213ENST00000550709 MRPL28Q13084 256 aaKnown RBP11.49□□□□□ -0.57
TROAP-213ENST00000550709 UBE2V2Q15819 145 aa11.49□□□□□ -0.57
TROAP-213ENST00000550709 CR1LQ2VPA4 569 aa11.49□□□□□ -0.57
TROAP-213ENST00000550709 ESCO2Q56NI9 601 aa11.49□□□□□ -0.57
TROAP-213ENST00000550709 FAM76BQ5HYJ3 339 aa11.49□□□□□ -0.57
TROAP-213ENST00000550709 FAHD2BQ6P2I3 314 aaPredicted RBP11.49□□□□□ -0.57
TROAP-213ENST00000550709 EGFL6Q8IUX8 553 aa11.49□□□□□ -0.57
TROAP-213ENST00000550709 OR5T2Q8NGG2 359 aa11.49□□□□□ -0.57
TROAP-213ENST00000550709 SGCDQ92629 289 aa11.49□□□□□ -0.57
TROAP-213ENST00000550709 FAHD2AQ96GK7 314 aa11.49□□□□□ -0.57
TROAP-213ENST00000550709 CNBD2Q96M20 576 aa11.49□□□□□ -0.57
TROAP-213ENST00000550709 ANKRD60Q9BZ19 345 aa11.49□□□□□ -0.57
TROAP-213ENST00000550709 COMMD4Q9H0A8 199 aa11.49□□□□□ -0.57
TROAP-213ENST00000550709 SHARPINQ9H0F6 387 aa11.49□□□□□ -0.57
TROAP-213ENST00000550709 WDR13Q9H1Z4 485 aa11.49□□□□□ -0.57
TROAP-213ENST00000550709 SNTG1Q9NSN8 517 aa11.49□□□□□ -0.57
TROAP-213ENST00000550709 BABAM2Q9NXR7 383 aa11.49□□□□□ -0.57
TROAP-213ENST00000550709 SCN3BQ9NY72 215 aa11.49□□□□□ -0.57
TROAP-213ENST00000550709 MIOXQ9UGB7 285 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms