RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 TOLLIPQ9H0E2 274 aa1.89□□□□□ -2.11
CCDC38-208ENST00000549876 SAV1Q9H4B6 383 aaPredicted RBP1.89□□□□□ -2.11
CCDC38-208ENST00000549876 EDA2RQ9HAV5 297 aa1.89□□□□□ -2.11
CCDC38-208ENST00000549876 PLEKHA1Q9HB21 404 aa1.89□□□□□ -2.11
CCDC38-208ENST00000549876 PARVGQ9HBI0 331 aa1.89□□□□□ -2.11
CCDC38-208ENST00000549876 RRAGDQ9NQL2 400 aaPredicted RBP1.89□□□□□ -2.11
CCDC38-208ENST00000549876 FBXO8Q9NRD0 319 aa1.89□□□□□ -2.11
CCDC38-208ENST00000549876 AP3M1Q9Y2T2 418 aa1.89□□□□□ -2.11
CCDC38-208ENST00000549876 SIGLEC9Q9Y336 463 aa1.89□□□□□ -2.11
CCDC38-208ENST00000549876 TSSC4Q9Y5U2 329 aaPredicted RBP1.89□□□□□ -2.11
CCDC38-208ENST00000549876 IGSF9BQ9UPX0 1349 aa1.89□□□□□ -2.11
CCDC38-208ENST00000549876 LRPPRCP42704 1394 aaKnown RBP1.88□□□□□ -2.11
CCDC38-208ENST00000549876 IGLV11-55A0A075B6I3 123 aa1.88□□□□□ -2.11
CCDC38-208ENST00000549876 IGHV1-69DA0A0B4J2H0 117 aa1.88□□□□□ -2.11
CCDC38-208ENST00000549876 IGHV3-66A0A0C4DH42 116 aa1.88□□□□□ -2.11
CCDC38-208ENST00000549876 TMEM213A2RRL7 107 aa1.88□□□□□ -2.11
CCDC38-208ENST00000549876 M0R1B8 84 aa1.88□□□□□ -2.11
CCDC38-208ENST00000549876 B4GALT5O43286 388 aa1.88□□□□□ -2.11
CCDC38-208ENST00000549876 PTTG1O95997 202 aa1.88□□□□□ -2.11
CCDC38-208ENST00000549876 CISD3P0C7P0 127 aa1.88□□□□□ -2.11
CCDC38-208ENST00000549876 LIPCP11150 499 aa1.88□□□□□ -2.11
CCDC38-208ENST00000549876 PGAM1P18669 254 aa1.88□□□□□ -2.11
CCDC38-208ENST00000549876 TCN2P20062 427 aa1.88□□□□□ -2.11
CCDC38-208ENST00000549876 PSMB6P28072 239 aa1.88□□□□□ -2.11
CCDC38-208ENST00000549876 NDUFA8P51970 172 aa1.88□□□□□ -2.11
CCDC38-208ENST00000549876 CACNG7P62955 275 aa1.88□□□□□ -2.11
CCDC38-208ENST00000549876 SLC35A1P78382 337 aa1.88□□□□□ -2.11
CCDC38-208ENST00000549876 ARG2P78540 354 aa1.88□□□□□ -2.11
CCDC38-208ENST00000549876 PMS2P3Q13401 168 aa1.88□□□□□ -2.11
CCDC38-208ENST00000549876 IRF4Q15306 451 aa1.88□□□□□ -2.11
CCDC38-208ENST00000549876 ORMDL2Q53FV1 153 aa1.88□□□□□ -2.11
CCDC38-208ENST00000549876 TCEAL5Q5H9L2 206 aa1.88□□□□□ -2.11
CCDC38-208ENST00000549876 CCDC122Q5T0U0 273 aa1.88□□□□□ -2.11
CCDC38-208ENST00000549876 RESP18Q5W5W9 173 aa1.88□□□□□ -2.11
CCDC38-208ENST00000549876 STEAP4Q687X5 459 aa1.88□□□□□ -2.11
CCDC38-208ENST00000549876 EPGNQ6UW88 154 aa1.88□□□□□ -2.11
CCDC38-208ENST00000549876 TRMT10CQ7L0Y3 403 aaKnown RBP1.88□□□□□ -2.11
CCDC38-208ENST00000549876 FAM19A1Q7Z5A9 133 aa1.88□□□□□ -2.11
CCDC38-208ENST00000549876 SETD3Q86TU7 594 aaPredicted RBP1.88□□□□□ -2.11
CCDC38-208ENST00000549876 TMEM25Q86YD3 366 aa1.88□□□□□ -2.11
CCDC38-208ENST00000549876 FAM9CQ8IZT9 166 aa1.88□□□□□ -2.11
CCDC38-208ENST00000549876 SLC7A5P1Q8MH63 180 aa1.88□□□□□ -2.11
CCDC38-208ENST00000549876 C19orf18Q8NEA5 215 aa1.88□□□□□ -2.11
CCDC38-208ENST00000549876 ABHD3Q8WU67 409 aa1.88□□□□□ -2.11
CCDC38-208ENST00000549876 RORBQ92753 470 aa1.88□□□□□ -2.11
CCDC38-208ENST00000549876 TCEAL3Q969E4 200 aa1.88□□□□□ -2.11
CCDC38-208ENST00000549876 EXOSC8Q96B26 276 aaKnown RBP1.88□□□□□ -2.11
CCDC38-208ENST00000549876 SMARCD1Q96GM5 515 aa1.88□□□□□ -2.11
CCDC38-208ENST00000549876 ADTRPQ96IZ2 230 aa1.88□□□□□ -2.11
CCDC38-208ENST00000549876 ARL5BQ96KC2 179 aa1.88□□□□□ -2.11
CCDC38-208ENST00000549876 CATSPER2Q96P56 530 aa1.88□□□□□ -2.11
CCDC38-208ENST00000549876 PDCD1LG2Q9BQ51 273 aa1.88□□□□□ -2.11
CCDC38-208ENST00000549876 CHAC1Q9BUX1 264 aa1.88□□□□□ -2.11
CCDC38-208ENST00000549876 HDHD2Q9H0R4 259 aa1.88□□□□□ -2.11
CCDC38-208ENST00000549876 ARV1Q9H2C2 271 aa1.88□□□□□ -2.11
CCDC38-208ENST00000549876 SPNS1Q9H2V7 528 aa1.88□□□□□ -2.11
CCDC38-208ENST00000549876 PRORYQ9H606 182 aa1.88□□□□□ -2.11
CCDC38-208ENST00000549876 TMEM27Q9HBJ8 222 aa1.88□□□□□ -2.11
CCDC38-208ENST00000549876 EURLQ9NYK6 297 aa1.88□□□□□ -2.11
CCDC38-208ENST00000549876 CYB5R1Q9UHQ9 305 aa1.88□□□□□ -2.11
CCDC38-208ENST00000549876 TFR2Q9UP52 801 aa1.88□□□□□ -2.11
CCDC38-208ENST00000549876 SLC7A11Q9UPY5 501 aa1.88□□□□□ -2.11
CCDC38-208ENST00000549876 URGCP-MRPS24S4R325 110 aa1.88□□□□□ -2.11
CCDC38-208ENST00000549876 AK9Q5TCS8 1911 aa1.87□□□□□ -2.11
CCDC38-208ENST00000549876 TRAV8-4A0A0B4J246 113 aa1.87□□□□□ -2.11
CCDC38-208ENST00000549876 IGKV1-8A0A0C4DH67 115 aa1.87□□□□□ -2.11
CCDC38-208ENST00000549876 SLC5A10A0PJK1 596 aa1.87□□□□□ -2.11
CCDC38-208ENST00000549876 INS-IGF2F8WCM5 200 aa1.87□□□□□ -2.11
CCDC38-208ENST00000549876 CLDN34H7C241 214 aa1.87□□□□□ -2.11
CCDC38-208ENST00000549876 DNASE2O00115 360 aaPredicted RBP1.87□□□□□ -2.11
CCDC38-208ENST00000549876 TAAR5O14804 337 aa1.87□□□□□ -2.11
CCDC38-208ENST00000549876 SGCEO43556 437 aa1.87□□□□□ -2.11
CCDC38-208ENST00000549876 CD5LO43866 347 aa1.87□□□□□ -2.11
CCDC38-208ENST00000549876 RP2O75695 350 aa1.87□□□□□ -2.11
CCDC38-208ENST00000549876 GABARAPO95166 117 aa1.87□□□□□ -2.11
CCDC38-208ENST00000549876 CD8AP01732 235 aa1.87□□□□□ -2.11
CCDC38-208ENST00000549876 P01737 135 aa1.87□□□□□ -2.11
CCDC38-208ENST00000549876 SLC35E2BP0CK96 405 aa1.87□□□□□ -2.11
CCDC38-208ENST00000549876 CXCR1P25024 350 aa1.87□□□□□ -2.11
CCDC38-208ENST00000549876 CD70P32970 193 aa1.87□□□□□ -2.11
CCDC38-208ENST00000549876 SSTR5P35346 364 aa1.87□□□□□ -2.11
CCDC38-208ENST00000549876 GGT2P36268 569 aa1.87□□□□□ -2.11
CCDC38-208ENST00000549876 UGT2B10P36537 528 aa1.87□□□□□ -2.11
CCDC38-208ENST00000549876 GALR1P47211 349 aa1.87□□□□□ -2.11
CCDC38-208ENST00000549876 UBE2AP49459 152 aa1.87□□□□□ -2.11
CCDC38-208ENST00000549876 MTPNP58546 118 aa1.87□□□□□ -2.11
CCDC38-208ENST00000549876 UBE2KP61086 200 aa1.87□□□□□ -2.11
CCDC38-208ENST00000549876 ERCC8Q13216 396 aa1.87□□□□□ -2.11
CCDC38-208ENST00000549876 GUSBP1Q15486 140 aa1.87□□□□□ -2.11
CCDC38-208ENST00000549876 TOMM34Q15785 309 aaPredicted RBP1.87□□□□□ -2.11
CCDC38-208ENST00000549876 PRR9Q5T870 116 aa1.87□□□□□ -2.11
CCDC38-208ENST00000549876 THOC7Q6I9Y2 204 aaKnown RBP1.87□□□□□ -2.11
CCDC38-208ENST00000549876 DNAJC24Q6P3W2 148 aa1.87□□□□□ -2.11
CCDC38-208ENST00000549876 RTL4Q6ZR62 310 aa1.87□□□□□ -2.11
CCDC38-208ENST00000549876 CYP4Z1Q86W10 505 aa1.87□□□□□ -2.11
CCDC38-208ENST00000549876 NKAIN4Q8IVV8 208 aa1.87□□□□□ -2.11
CCDC38-208ENST00000549876 NELFCDQ8IXH7 590 aa1.87□□□□□ -2.11
CCDC38-208ENST00000549876 COL27A1Q8IZC6 1860 aaPredicted RBP1.87□□□□□ -2.11
CCDC38-208ENST00000549876 GPR26Q8NDV2 337 aa1.87□□□□□ -2.11
CCDC38-208ENST00000549876 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms