RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 GMPPAQ96IJ6 420 aaPredicted RBP8.67□□□□□ -1.02
RAB5B-206ENST00000549505 DHRS9Q9BPW9 319 aa8.67□□□□□ -1.02
RAB5B-206ENST00000549505 MRPL15Q9P015 296 aaKnown RBP8.67□□□□□ -1.02
RAB5B-206ENST00000549505 SPRR3Q9UBC9 169 aa8.67□□□□□ -1.02
RAB5B-206ENST00000549505 DOCK10Q96BY6 2186 aa8.66□□□□□ -1.02
RAB5B-206ENST00000549505 DBHP09172 617 aa8.66□□□□□ -1.02
RAB5B-206ENST00000549505 AGTR1P30556 359 aa8.66□□□□□ -1.02
RAB5B-206ENST00000549505 ATPAF1Q5TC12 328 aaPredicted RBP8.66□□□□□ -1.02
RAB5B-206ENST00000549505 GALNTL5Q7Z4T8 443 aa8.66□□□□□ -1.02
RAB5B-206ENST00000549505 TRAPPC6BQ86SZ2 158 aa8.66□□□□□ -1.02
RAB5B-206ENST00000549505 DEFB124Q8NES8 71 aa8.66□□□□□ -1.02
RAB5B-206ENST00000549505 OR11H4Q8NGC9 324 aa8.66□□□□□ -1.02
RAB5B-206ENST00000549505 RAB3CQ96E17 227 aa8.66□□□□□ -1.02
RAB5B-206ENST00000549505 POM121L2Q96KW2 1035 aa8.66□□□□□ -1.02
RAB5B-206ENST00000549505 SLC6A7Q99884 636 aa8.66□□□□□ -1.02
RAB5B-206ENST00000549505 PLA2G3Q9NZ20 509 aa8.66□□□□□ -1.02
RAB5B-206ENST00000549505 EDARQ9UNE0 448 aa8.66□□□□□ -1.02
RAB5B-206ENST00000549505 TMEM235A6NFC5 223 aa8.66□□□□□ -1.02
RAB5B-206ENST00000549505 DBX1A6NMT0 343 aa8.66□□□□□ -1.02
RAB5B-206ENST00000549505 F5H5K5 113 aa8.66□□□□□ -1.02
RAB5B-206ENST00000549505 B4GALT1P15291 398 aa8.66□□□□□ -1.02
RAB5B-206ENST00000549505 CPT2P23786 658 aa8.66□□□□□ -1.02
RAB5B-206ENST00000549505 DTYMKP23919 212 aa8.66□□□□□ -1.02
RAB5B-206ENST00000549505 ZBTB25P24278 435 aa8.66□□□□□ -1.02
RAB5B-206ENST00000549505 ECI1P42126 302 aa8.66□□□□□ -1.02
RAB5B-206ENST00000549505 ARF1P84077 181 aaKnown RBP8.66□□□□□ -1.02
RAB5B-206ENST00000549505 RNFT1Q5M7Z0 435 aa8.66□□□□□ -1.02
RAB5B-206ENST00000549505 OR10K2Q6IF99 312 aa8.66□□□□□ -1.02
RAB5B-206ENST00000549505 CCDC28AQ8IWP9 274 aa8.66□□□□□ -1.02
RAB5B-206ENST00000549505 TUSC5Q8IXB3 177 aa8.66□□□□□ -1.02
RAB5B-206ENST00000549505 IL22RA1Q8N6P7 574 aa8.66□□□□□ -1.02
RAB5B-206ENST00000549505 ST8SIA2Q92186 375 aa8.66□□□□□ -1.02
RAB5B-206ENST00000549505 CHST6Q9GZX3 395 aa8.66□□□□□ -1.02
RAB5B-206ENST00000549505 TRGV5A0A0B4J1U4 118 aa8.65□□□□□ -1.02
RAB5B-206ENST00000549505 ZNF816-ZNF321PA0A0X1KG74 233 aa8.65□□□□□ -1.02
RAB5B-206ENST00000549505 PQLC2LA1A4F0 135 aa8.65□□□□□ -1.02
RAB5B-206ENST00000549505 TUBAL3A6NHL2 446 aa8.65□□□□□ -1.02
RAB5B-206ENST00000549505 FIGNL2A6NMB9 653 aa8.65□□□□□ -1.02
RAB5B-206ENST00000549505 ANXA7P20073 488 aaKnown RBP8.65□□□□□ -1.02
RAB5B-206ENST00000549505 MPGP29372 298 aa8.65□□□□□ -1.02
RAB5B-206ENST00000549505 ACBD4Q8NC06 268 aa8.65□□□□□ -1.02
RAB5B-206ENST00000549505 OR2AK2Q8NG84 335 aa8.65□□□□□ -1.02
RAB5B-206ENST00000549505 OR1K1Q8NGR3 316 aa8.65□□□□□ -1.02
RAB5B-206ENST00000549505 APH1AQ96BI3 265 aa8.65□□□□□ -1.02
RAB5B-206ENST00000549505 ALKBH3Q96Q83 286 aaPredicted RBP8.65□□□□□ -1.02
RAB5B-206ENST00000549505 PECRQ9BY49 303 aa8.65□□□□□ -1.02
RAB5B-206ENST00000549505 IGKV1-27A0A075B6S5 117 aa8.65□□□□□ -1.02
RAB5B-206ENST00000549505 TMEM82A0PJX8 343 aa8.65□□□□□ -1.02
RAB5B-206ENST00000549505 H3BSH0 61 aa8.65□□□□□ -1.02
RAB5B-206ENST00000549505 RAD51DO75771 328 aa8.65□□□□□ -1.02
RAB5B-206ENST00000549505 HCKP08631 526 aa8.65□□□□□ -1.02
RAB5B-206ENST00000549505 FAHP16930 419 aa8.65□□□□□ -1.02
RAB5B-206ENST00000549505 HTR2BP41595 481 aa8.65□□□□□ -1.02
RAB5B-206ENST00000549505 HTR5AP47898 357 aa8.65□□□□□ -1.02
RAB5B-206ENST00000549505 PLGLB1Q02325 96 aa8.65□□□□□ -1.02
RAB5B-206ENST00000549505 TGIF1Q15583 401 aa8.65□□□□□ -1.02
RAB5B-206ENST00000549505 PABPC1L2AQ5JQF8 200 aa8.65□□□□□ -1.02
RAB5B-206ENST00000549505 RPUSD3Q6P087 351 aaKnown RBP8.65□□□□□ -1.02
RAB5B-206ENST00000549505 PLXDC2Q6UX71 529 aa8.65□□□□□ -1.02
RAB5B-206ENST00000549505 C1QL2Q7Z5L3 287 aa8.65□□□□□ -1.02
RAB5B-206ENST00000549505 C1orf162Q8NEQ5 155 aaPredicted RBP8.65□□□□□ -1.02
RAB5B-206ENST00000549505 SLC39A7Q92504 469 aa8.65□□□□□ -1.02
RAB5B-206ENST00000549505 FBXW5Q969U6 566 aa8.65□□□□□ -1.02
RAB5B-206ENST00000549505 NICN1Q9BSH3 213 aa8.65□□□□□ -1.02
RAB5B-206ENST00000549505 TINAGL1Q9GZM7 467 aaPredicted RBP8.65□□□□□ -1.02
RAB5B-206ENST00000549505 IFT22Q9H7X7 185 aa8.65□□□□□ -1.02
RAB5B-206ENST00000549505 PCDHB16Q9NRJ7 776 aa8.65□□□□□ -1.02
RAB5B-206ENST00000549505 LOC100509620A0A075B734 347 aa8.65□□□□□ -1.03
RAB5B-206ENST00000549505 A0A1B0GWJ7 208 aa8.65□□□□□ -1.03
RAB5B-206ENST00000549505 ZNF891A8MT65 544 aaPredicted RBP8.65□□□□□ -1.03
RAB5B-206ENST00000549505 ERVH48-1M5A8F1 160 aa8.65□□□□□ -1.03
RAB5B-206ENST00000549505 MGMTP16455 207 aa8.65□□□□□ -1.03
RAB5B-206ENST00000549505 TUBG1P23258 451 aa8.65□□□□□ -1.03
RAB5B-206ENST00000549505 EIF2S3P41091 472 aaKnown RBP8.65□□□□□ -1.03
RAB5B-206ENST00000549505 TAS2R31P59538 309 aa8.65□□□□□ -1.03
RAB5B-206ENST00000549505 DAZAP2Q15038 168 aaPredicted RBP8.65□□□□□ -1.03
RAB5B-206ENST00000549505 FBXW9Q5XUX1 488 aa8.65□□□□□ -1.03
RAB5B-206ENST00000549505 TMEM65Q6PI78 240 aa8.65□□□□□ -1.03
RAB5B-206ENST00000549505 LINC00696Q6ZRV3 163 aa8.65□□□□□ -1.03
RAB5B-206ENST00000549505 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.65□□□□□ -1.03
RAB5B-206ENST00000549505 BPIFB2Q8N4F0 458 aa8.65□□□□□ -1.03
RAB5B-206ENST00000549505 PCNPQ8WW12 178 aaKnown RBP8.65□□□□□ -1.03
RAB5B-206ENST00000549505 APOBEC3DQ96AK3 386 aaPredicted RBP8.65□□□□□ -1.03
RAB5B-206ENST00000549505 SEC22CQ9BRL7 303 aa8.65□□□□□ -1.03
RAB5B-206ENST00000549505 POFUT1Q9H488 388 aa8.65□□□□□ -1.03
RAB5B-206ENST00000549505 TUBG2Q9NRH3 451 aa8.65□□□□□ -1.03
RAB5B-206ENST00000549505 OPN4Q9UHM6 478 aa8.65□□□□□ -1.03
RAB5B-206ENST00000549505 OSGIN2Q9Y236 505 aa8.65□□□□□ -1.03
RAB5B-206ENST00000549505 LIPGQ9Y5X9 500 aa8.65□□□□□ -1.03
RAB5B-206ENST00000549505 SOCS1O15524 211 aa8.64□□□□□ -1.03
RAB5B-206ENST00000549505 OR4E1P0C645 316 aa8.64□□□□□ -1.03
RAB5B-206ENST00000549505 CALCRP30988 508 aa8.64□□□□□ -1.03
RAB5B-206ENST00000549505 CLN3Q13286 438 aa8.64□□□□□ -1.03
RAB5B-206ENST00000549505 RNASE10Q5GAN6 216 aaKnown RBP8.64□□□□□ -1.03
RAB5B-206ENST00000549505 SFRP5Q5T4F7 317 aa8.64□□□□□ -1.03
RAB5B-206ENST00000549505 FAAP20Q6NZ36 180 aa8.64□□□□□ -1.03
RAB5B-206ENST00000549505 IDO2Q6ZQW0 420 aa8.64□□□□□ -1.03
RAB5B-206ENST00000549505 MUC20Q8N307 709 aaPredicted RBP8.64□□□□□ -1.03
RAB5B-206ENST00000549505 FAM169BQ8N8A8 192 aa8.64□□□□□ -1.03
RAB5B-206ENST00000549505 MITD1Q8WV92 249 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms