RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 PSG7Q13046 419 aa6.92□□□□□ -1.3
DEPDC4-207ENST00000549249 PRDX4Q13162 271 aa6.92□□□□□ -1.3
DEPDC4-207ENST00000549249 DYNC1I2Q13409 638 aaKnown RBP6.92□□□□□ -1.3
DEPDC4-207ENST00000549249 P2RY14Q15391 338 aa6.92□□□□□ -1.3
DEPDC4-207ENST00000549249 MBNL2Q5VZF2 373 aaKnown RBP6.92□□□□□ -1.3
DEPDC4-207ENST00000549249 GLT8D1Q68CQ7 371 aa6.92□□□□□ -1.3
DEPDC4-207ENST00000549249 LINC00299Q6ZSB3 139 aa6.92□□□□□ -1.3
DEPDC4-207ENST00000549249 MOB3CQ70IA8 216 aa6.92□□□□□ -1.3
DEPDC4-207ENST00000549249 BIVMQ86UB2 503 aa6.92□□□□□ -1.3
DEPDC4-207ENST00000549249 CCDC190Q86UF4 302 aa6.92□□□□□ -1.3
DEPDC4-207ENST00000549249 ZNF808Q8N4W9 903 aaPredicted RBP6.92□□□□□ -1.3
DEPDC4-207ENST00000549249 JAGN1Q8N5M9 183 aa6.92□□□□□ -1.3
DEPDC4-207ENST00000549249 BHLHE23Q8NDY6 225 aa6.92□□□□□ -1.3
DEPDC4-207ENST00000549249 CSNK2A3Q8NEV1 391 aa6.92□□□□□ -1.3
DEPDC4-207ENST00000549249 ACOT12Q8WYK0 555 aa6.92□□□□□ -1.3
DEPDC4-207ENST00000549249 PIGCQ92535 297 aa6.92□□□□□ -1.3
DEPDC4-207ENST00000549249 AP3S1Q92572 193 aa6.92□□□□□ -1.3
DEPDC4-207ENST00000549249 RFT1Q96AA3 541 aa6.92□□□□□ -1.3
DEPDC4-207ENST00000549249 HAVCR1Q96D42 359 aa6.92□□□□□ -1.3
DEPDC4-207ENST00000549249 SLC25A38Q96DW6 304 aa6.92□□□□□ -1.3
DEPDC4-207ENST00000549249 PAPOLGQ9BWT3 736 aaKnown RBP6.92□□□□□ -1.3
DEPDC4-207ENST00000549249 BCL2L14Q9BZR8 327 aa6.92□□□□□ -1.3
DEPDC4-207ENST00000549249 CNTD2Q9H8S5 307 aa6.92□□□□□ -1.3
DEPDC4-207ENST00000549249 LIN7BQ9HAP6 207 aa6.92□□□□□ -1.3
DEPDC4-207ENST00000549249 PLGRKTQ9HBL7 147 aa6.92□□□□□ -1.3
DEPDC4-207ENST00000549249 COMMD3Q9UBI1 195 aa6.92□□□□□ -1.3
DEPDC4-207ENST00000549249 PURGQ9UJV8 347 aaKnown RBP6.92□□□□□ -1.3
DEPDC4-207ENST00000549249 FZR1Q9UM11 496 aa6.92□□□□□ -1.3
DEPDC4-207ENST00000549249 SPATA2Q9UM82 520 aa6.92□□□□□ -1.3
DEPDC4-207ENST00000549249 PEX16Q9Y5Y5 336 aa6.92□□□□□ -1.3
DEPDC4-207ENST00000549249 ARFGEF3Q5TH69 2177 aa6.91□□□□□ -1.3
DEPDC4-207ENST00000549249 SHISA9B4DS77 424 aa6.91□□□□□ -1.3
DEPDC4-207ENST00000549249 ABCD4O14678 606 aa6.91□□□□□ -1.3
DEPDC4-207ENST00000549249 LDLRAD4O15165 306 aa6.91□□□□□ -1.3
DEPDC4-207ENST00000549249 RGS5O15539 181 aa6.91□□□□□ -1.3
DEPDC4-207ENST00000549249 ERCC1P07992 297 aaPredicted RBP6.91□□□□□ -1.3
DEPDC4-207ENST00000549249 HCKP08631 526 aa6.91□□□□□ -1.3
DEPDC4-207ENST00000549249 CALCBP10092 127 aa6.91□□□□□ -1.3
DEPDC4-207ENST00000549249 ZNF250P15622 560 aa6.91□□□□□ -1.3
DEPDC4-207ENST00000549249 ELK1P19419 428 aa6.91□□□□□ -1.3
DEPDC4-207ENST00000549249 KITLGP21583 273 aa6.91□□□□□ -1.3
DEPDC4-207ENST00000549249 PTAFRP25105 342 aa6.91□□□□□ -1.3
DEPDC4-207ENST00000549249 HTR2CP28335 458 aa6.91□□□□□ -1.3
DEPDC4-207ENST00000549249 GLRXP35754 106 aa6.91□□□□□ -1.3
DEPDC4-207ENST00000549249 ZNF93P35789 620 aaPredicted RBP6.91□□□□□ -1.3
DEPDC4-207ENST00000549249 ETV6P41212 452 aa6.91□□□□□ -1.3
DEPDC4-207ENST00000549249 POU3F4P49335 361 aa6.91□□□□□ -1.3
DEPDC4-207ENST00000549249 PSMD7P51665 324 aa6.91□□□□□ -1.3
DEPDC4-207ENST00000549249 ZP1P60852 638 aa6.91□□□□□ -1.3
DEPDC4-207ENST00000549249 QRFPP83859 136 aa6.91□□□□□ -1.3
DEPDC4-207ENST00000549249 CNN3Q15417 329 aaKnown RBP6.91□□□□□ -1.3
DEPDC4-207ENST00000549249 RAB11BQ15907 218 aa6.91□□□□□ -1.3
DEPDC4-207ENST00000549249 MOGQ16653 247 aa6.91□□□□□ -1.3
DEPDC4-207ENST00000549249 NKAPLQ5M9Q1 402 aa6.91□□□□□ -1.3
DEPDC4-207ENST00000549249 NCMAPQ5T1S8 102 aa6.91□□□□□ -1.3
DEPDC4-207ENST00000549249 PLCXD3Q63HM9 321 aa6.91□□□□□ -1.3
DEPDC4-207ENST00000549249 RGS7BPQ6MZT1 257 aaPredicted RBP6.91□□□□□ -1.3
DEPDC4-207ENST00000549249 MZT2AQ6P582 158 aa6.91□□□□□ -1.3
DEPDC4-207ENST00000549249 XKRXQ6PP77 449 aa6.91□□□□□ -1.3
DEPDC4-207ENST00000549249 TMEM108Q6UXF1 575 aa6.91□□□□□ -1.3
DEPDC4-207ENST00000549249 Q6ZR03 302 aa6.91□□□□□ -1.3
DEPDC4-207ENST00000549249 SSX8Q7RTT4 187 aa6.91□□□□□ -1.3
DEPDC4-207ENST00000549249 LRP11Q86VZ4 500 aa6.91□□□□□ -1.3
DEPDC4-207ENST00000549249 CDH26Q8IXH8 852 aa6.91□□□□□ -1.3
DEPDC4-207ENST00000549249 OR51D1Q8NGF3 324 aa6.91□□□□□ -1.3
DEPDC4-207ENST00000549249 OR6M1Q8NGM8 313 aa6.91□□□□□ -1.3
DEPDC4-207ENST00000549249 TMEM171Q8WVE6 324 aa6.91□□□□□ -1.3
DEPDC4-207ENST00000549249 GTF3AQ92664 365 aaKnown RBP6.91□□□□□ -1.3
DEPDC4-207ENST00000549249 ITFG2Q969R8 447 aa6.91□□□□□ -1.3
DEPDC4-207ENST00000549249 SPSB1Q96BD6 273 aa6.91□□□□□ -1.3
DEPDC4-207ENST00000549249 RADILQ96JH8 1075 aa6.91□□□□□ -1.3
DEPDC4-207ENST00000549249 C1orf147Q96MC9 270 aaPredicted RBP6.91□□□□□ -1.3
DEPDC4-207ENST00000549249 SORCS2Q96PQ0 1159 aa6.91□□□□□ -1.3
DEPDC4-207ENST00000549249 UQCC2Q9BRT2 126 aa6.91□□□□□ -1.3
DEPDC4-207ENST00000549249 ABRACLQ9P1F3 81 aa6.91□□□□□ -1.3
DEPDC4-207ENST00000549249 MYEF2Q9P2K5 600 aaKnown RBP6.91□□□□□ -1.3
DEPDC4-207ENST00000549249 V9GYH0 126 aa6.91□□□□□ -1.3
DEPDC4-207ENST00000549249 USP9XQ93008 2570 aaPredicted RBP6.91□□□□□ -1.3
DEPDC4-207ENST00000549249 IGLV3-9A0A075B6K5 115 aa6.9□□□□□ -1.3
DEPDC4-207ENST00000549249 TMEM272A0A1B0GTI8 110 aa6.9□□□□□ -1.3
DEPDC4-207ENST00000549249 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.9□□□□□ -1.3
DEPDC4-207ENST00000549249 FAM230AA0A1W2PPH8 454 aa6.9□□□□□ -1.3
DEPDC4-207ENST00000549249 PQLC2LA1A4F0 135 aa6.9□□□□□ -1.3
DEPDC4-207ENST00000549249 DEFB108AA8MXU0 73 aa6.9□□□□□ -1.3
DEPDC4-207ENST00000549249 H0YL77 283 aa6.9□□□□□ -1.3
DEPDC4-207ENST00000549249 C19orf84I3L1E1 186 aa6.9□□□□□ -1.3
DEPDC4-207ENST00000549249 J3QRK9 145 aa6.9□□□□□ -1.3
DEPDC4-207ENST00000549249 MLNRO43193 412 aa6.9□□□□□ -1.3
DEPDC4-207ENST00000549249 TMEM127O75204 238 aa6.9□□□□□ -1.3
DEPDC4-207ENST00000549249 PLAUP00749 431 aa6.9□□□□□ -1.3
DEPDC4-207ENST00000549249 PRKACBP22694 351 aa6.9□□□□□ -1.3
DEPDC4-207ENST00000549249 TUBG1P23258 451 aa6.9□□□□□ -1.3
DEPDC4-207ENST00000549249 CA6P23280 308 aa6.9□□□□□ -1.3
DEPDC4-207ENST00000549249 S100A5P33763 92 aa6.9□□□□□ -1.3
DEPDC4-207ENST00000549249 EVX1P49640 407 aa6.9□□□□□ -1.3
DEPDC4-207ENST00000549249 FABP6P51161 128 aa6.9□□□□□ -1.3
DEPDC4-207ENST00000549249 EFNB2P52799 333 aa6.9□□□□□ -1.3
DEPDC4-207ENST00000549249 MADCAM1Q13477 382 aa6.9□□□□□ -1.3
DEPDC4-207ENST00000549249 RIN1Q13671 783 aa6.9□□□□□ -1.3
DEPDC4-207ENST00000549249 KISS1Q15726 138 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms