RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 PNO1Q9NRX1 252 aaKnown RBP4.15□□□□□ -1.74
SCAF11-212ENST00000549162 NUP214P35658 2090 aaPredicted RBP4.15□□□□□ -1.74
SCAF11-212ENST00000549162 ZC3H12DA2A288 527 aaKnown RBP4.15□□□□□ -1.74
SCAF11-212ENST00000549162 E9PI62 339 aa4.15□□□□□ -1.74
SCAF11-212ENST00000549162 MAGEB3O15480 346 aa4.15□□□□□ -1.74
SCAF11-212ENST00000549162 RFPL3SP0C7P2 107 aa4.15□□□□□ -1.74
SCAF11-212ENST00000549162 SOAT1P35610 550 aa4.15□□□□□ -1.74
SCAF11-212ENST00000549162 CAMLGP49069 296 aa4.15□□□□□ -1.74
SCAF11-212ENST00000549162 RORCP51449 518 aa4.15□□□□□ -1.74
SCAF11-212ENST00000549162 NANOS3P60323 173 aaKnown RBP4.15□□□□□ -1.74
SCAF11-212ENST00000549162 ZNF79Q15937 498 aa4.15□□□□□ -1.74
SCAF11-212ENST00000549162 DGUOKQ16854 277 aa4.15□□□□□ -1.74
SCAF11-212ENST00000549162 DEFB110Q30KQ9 67 aa4.15□□□□□ -1.74
SCAF11-212ENST00000549162 KRTAP21-3Q3LHN1 58 aa4.15□□□□□ -1.74
SCAF11-212ENST00000549162 TCEAL6Q6IPX3 200 aa4.15□□□□□ -1.74
SCAF11-212ENST00000549162 ARL9Q6T311 187 aa4.15□□□□□ -1.74
SCAF11-212ENST00000549162 LINC00696Q6ZRV3 163 aa4.15□□□□□ -1.74
SCAF11-212ENST00000549162 RTN4RL2Q86UN3 420 aa4.15□□□□□ -1.74
SCAF11-212ENST00000549162 NR2C2APQ86WQ0 139 aa4.15□□□□□ -1.74
SCAF11-212ENST00000549162 LRRC17Q8N6Y2 441 aa4.15□□□□□ -1.74
SCAF11-212ENST00000549162 BPIFCQ8NFQ6 507 aa4.15□□□□□ -1.74
SCAF11-212ENST00000549162 OR8G5Q8NG78 346 aa4.15□□□□□ -1.74
SCAF11-212ENST00000549162 TCEAL3Q969E4 200 aa4.15□□□□□ -1.74
SCAF11-212ENST00000549162 SPTSSAQ969W0 71 aa4.15□□□□□ -1.74
SCAF11-212ENST00000549162 ZNF799Q96GE5 643 aa4.15□□□□□ -1.74
SCAF11-212ENST00000549162 SORCS2Q96PQ0 1159 aa4.15□□□□□ -1.74
SCAF11-212ENST00000549162 SLC6A15Q9H2J7 730 aa4.15□□□□□ -1.74
SCAF11-212ENST00000549162 AKIRIN1Q9H9L7 192 aaPredicted RBP4.15□□□□□ -1.74
SCAF11-212ENST00000549162 SPACA1Q9HBV2 294 aa4.15□□□□□ -1.74
SCAF11-212ENST00000549162 RAB9BQ9NP90 201 aa4.15□□□□□ -1.74
SCAF11-212ENST00000549162 SIRT4Q9Y6E7 314 aaPredicted RBP4.15□□□□□ -1.74
SCAF11-212ENST00000549162 SPTBN5Q9NRC6 3674 aaKnown RBP4.15□□□□□ -1.74
SCAF11-212ENST00000549162 CPSF4LA6NMK7 179 aaKnown RBP4.15□□□□□ -1.75
SCAF11-212ENST00000549162 C17orf98A8MV24 154 aa4.15□□□□□ -1.75
SCAF11-212ENST00000549162 SHISA9B4DS77 424 aa4.15□□□□□ -1.75
SCAF11-212ENST00000549162 LY6LH3BQJ8 138 aa4.15□□□□□ -1.75
SCAF11-212ENST00000549162 hCG_2039718K7EN88 272 aa4.15□□□□□ -1.75
SCAF11-212ENST00000549162 ARPC1BO15143 372 aaKnown RBP4.15□□□□□ -1.75
SCAF11-212ENST00000549162 UPK1BO75841 260 aa4.15□□□□□ -1.75
SCAF11-212ENST00000549162 LALBAP00709 142 aa4.15□□□□□ -1.75
SCAF11-212ENST00000549162 SLC6A1P30531 599 aa4.15□□□□□ -1.75
SCAF11-212ENST00000549162 CLDN20P56880 219 aa4.15□□□□□ -1.75
SCAF11-212ENST00000549162 GRK1Q15835 563 aa4.15□□□□□ -1.75
SCAF11-212ENST00000549162 VWC2Q2TAL6 325 aa4.15□□□□□ -1.75
SCAF11-212ENST00000549162 TMEM225Q6GV28 225 aa4.15□□□□□ -1.75
SCAF11-212ENST00000549162 TEPPQ6URK8 271 aa4.15□□□□□ -1.75
SCAF11-212ENST00000549162 LAYNQ6UX15 382 aa4.15□□□□□ -1.75
SCAF11-212ENST00000549162 DOLPP1Q86YN1 238 aa4.15□□□□□ -1.75
SCAF11-212ENST00000549162 PNKDQ8N490 385 aa4.15□□□□□ -1.75
SCAF11-212ENST00000549162 ZNF561Q8N587 486 aa4.15□□□□□ -1.75
SCAF11-212ENST00000549162 TMEM99Q8N816 258 aa4.15□□□□□ -1.75
SCAF11-212ENST00000549162 NPRL2Q8WTW4 380 aa4.15□□□□□ -1.75
SCAF11-212ENST00000549162 KCNS3Q9BQ31 491 aa4.15□□□□□ -1.75
SCAF11-212ENST00000549162 ING3Q9NXR8 418 aa4.15□□□□□ -1.75
SCAF11-212ENST00000549162 FBXL17Q9UF56 701 aa4.15□□□□□ -1.75
SCAF11-212ENST00000549162 ZNF816-ZNF321PA0A0X1KG74 233 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 TEX22C9J3V5 150 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 SDC3O75056 442 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 LCN6P62502 163 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 LRRC23Q53EV4 343 aaPredicted RBP4.14□□□□□ -1.75
SCAF11-212ENST00000549162 WDR38Q5JTN6 314 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 STUMQ69YW2 141 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 SLC36A1Q7Z2H8 476 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 ARRDC1Q8N5I2 433 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.14□□□□□ -1.75
SCAF11-212ENST00000549162 Q8N9G6 341 aaPredicted RBP4.14□□□□□ -1.75
SCAF11-212ENST00000549162 OR52E5Q8NH55 327 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 SLAMF6Q96DU3 332 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 KCTD7Q96MP8 289 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 RBP7Q96R05 134 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 SEC22CQ9BRL7 303 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 SLC5A7Q9GZV3 580 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 METTL7AQ9H8H3 244 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 MTFP1Q9UDX5 166 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 DKKL1Q9UK85 242 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 TRBV2A0A0J9YWF9 115 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 A0A1B0GW64 132 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 ZNF850A8MQ14 1090 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 SRRM5B3KS81 715 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 ZNF587BE7ETH6 402 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 NOL3O60936 208 aaKnown RBP4.14□□□□□ -1.75
SCAF11-212ENST00000549162 CTXN2P0C2S0 81 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 ADRA2CP18825 462 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 GATA3P23771 443 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 RFX2P48378 723 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 CSNK1A1P48729 337 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 TIRAPP58753 221 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 TAS2R30P59541 319 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 RBPJQ06330 500 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 SCN1BQ07699 218 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 ZNF404Q494X3 552 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 TMEM255AQ5JRV8 349 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 FAM219BQ5XKK7 198 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 BICRALQ6AI39 1079 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 TMEM65Q6PI78 240 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 STAC2Q6ZMT1 411 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 AMIGO2Q86SJ2 522 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 IZUMO1Q8IYV9 350 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 TMEM86BQ8N661 226 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 ZNF611Q8N823 705 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms