RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 C8orf46Q8TAG6 207 aa11.07□□□□□ -0.64
CDX2-202ENST00000548877 PPP1R35Q8TAP8 253 aa11.07□□□□□ -0.64
CDX2-202ENST00000548877 FCGR1BQ92637 280 aa11.07□□□□□ -0.64
CDX2-202ENST00000548877 TNFRSF14Q92956 283 aa11.07□□□□□ -0.64
CDX2-202ENST00000548877 GPX7Q96SL4 187 aaPredicted RBP11.07□□□□□ -0.64
CDX2-202ENST00000548877 PPA2Q9H2U2 334 aa11.07□□□□□ -0.64
CDX2-202ENST00000548877 SLC25A19Q9HC21 320 aa11.07□□□□□ -0.64
CDX2-202ENST00000548877 NRIP3Q9NQ35 241 aa11.07□□□□□ -0.64
CDX2-202ENST00000548877 CNOT2Q9NZN8 540 aaKnown RBP11.07□□□□□ -0.64
CDX2-202ENST00000548877 FOXJ3Q9UPW0 622 aa11.07□□□□□ -0.64
CDX2-202ENST00000548877 MAB21L2Q9Y586 359 aa11.07□□□□□ -0.64
CDX2-202ENST00000548877 IRGMA1A4Y4 181 aa11.06□□□□□ -0.64
CDX2-202ENST00000548877 CCDC160A6NGH7 325 aa11.06□□□□□ -0.64
CDX2-202ENST00000548877 CD300LBA8K4G0 201 aa11.06□□□□□ -0.64
CDX2-202ENST00000548877 PTGES3LE9PB15 166 aa11.06□□□□□ -0.64
CDX2-202ENST00000548877 CDC42EP2O14613 210 aa11.06□□□□□ -0.64
CDX2-202ENST00000548877 PTP4A3O75365 173 aa11.06□□□□□ -0.64
CDX2-202ENST00000548877 WBP4O75554 376 aaKnown RBP11.06□□□□□ -0.64
CDX2-202ENST00000548877 PPP1R3DO95685 299 aa11.06□□□□□ -0.64
CDX2-202ENST00000548877 HMGN1P05114 100 aa11.06□□□□□ -0.64
CDX2-202ENST00000548877 CA6P23280 308 aa11.06□□□□□ -0.64
CDX2-202ENST00000548877 FMO3P31513 532 aa11.06□□□□□ -0.64
CDX2-202ENST00000548877 RPL4P36578 427 aaKnown RBP11.06□□□□□ -0.64
CDX2-202ENST00000548877 EMX1Q04741 257 aaPredicted RBP11.06□□□□□ -0.64
CDX2-202ENST00000548877 ACSM1Q08AH1 577 aa11.06□□□□□ -0.64
CDX2-202ENST00000548877 DBPQ10586 325 aaPredicted RBP11.06□□□□□ -0.64
CDX2-202ENST00000548877 MALLQ13021 153 aa11.06□□□□□ -0.64
CDX2-202ENST00000548877 KRR1Q13601 381 aaKnown RBP11.06□□□□□ -0.64
CDX2-202ENST00000548877 SLC25A30Q5SVS4 291 aa11.06□□□□□ -0.64
CDX2-202ENST00000548877 PGAP1Q75T13 922 aa11.06□□□□□ -0.64
CDX2-202ENST00000548877 ADCK1Q86TW2 530 aa11.06□□□□□ -0.64
CDX2-202ENST00000548877 CMTM4Q8IZR5 234 aa11.06□□□□□ -0.64
CDX2-202ENST00000548877 SPARTQ8N0X7 666 aa11.06□□□□□ -0.64
CDX2-202ENST00000548877 KLHDC1Q8N7A1 406 aa11.06□□□□□ -0.64
CDX2-202ENST00000548877 Q8N7P7 452 aa11.06□□□□□ -0.64
CDX2-202ENST00000548877 OR4S1Q8NGB4 309 aa11.06□□□□□ -0.64
CDX2-202ENST00000548877 SPRYD4Q8WW59 207 aaPredicted RBP11.06□□□□□ -0.64
CDX2-202ENST00000548877 SGCDQ92629 289 aa11.06□□□□□ -0.64
CDX2-202ENST00000548877 PHF21AQ96BD5 680 aa11.06□□□□□ -0.64
CDX2-202ENST00000548877 NUAK2Q9H093 628 aa11.06□□□□□ -0.64
CDX2-202ENST00000548877 SIGLEC9Q9Y336 463 aa11.06□□□□□ -0.64
CDX2-202ENST00000548877 IMPA2O14732 288 aa11.05□□□□□ -0.64
CDX2-202ENST00000548877 TXNDC12O95881 172 aa11.05□□□□□ -0.64
CDX2-202ENST00000548877 VSIG8P0DPA2 414 aa11.05□□□□□ -0.64
CDX2-202ENST00000548877 PIPP12273 146 aaPredicted RBP11.05□□□□□ -0.64
CDX2-202ENST00000548877 MUC1P15941 1255 aaPredicted RBP11.05□□□□□ -0.64
CDX2-202ENST00000548877 GABRB1P18505 474 aa11.05□□□□□ -0.64
CDX2-202ENST00000548877 UBE2E1P51965 193 aa11.05□□□□□ -0.64
CDX2-202ENST00000548877 PRSS12P56730 875 aa11.05□□□□□ -0.64
CDX2-202ENST00000548877 CDK5Q00535 292 aa11.05□□□□□ -0.64
CDX2-202ENST00000548877 AANATQ16613 207 aa11.05□□□□□ -0.64
CDX2-202ENST00000548877 LAIR2Q6ISS4 152 aa11.05□□□□□ -0.64
CDX2-202ENST00000548877 BOLLQ8N9W6 283 aaKnown RBP11.05□□□□□ -0.64
CDX2-202ENST00000548877 OR52L1Q8NGH7 329 aa11.05□□□□□ -0.64
CDX2-202ENST00000548877 OR4C13Q8NGP0 309 aa11.05□□□□□ -0.64
CDX2-202ENST00000548877 ST8SIA4Q92187 359 aa11.05□□□□□ -0.64
CDX2-202ENST00000548877 COPS4Q9BT78 406 aa11.05□□□□□ -0.64
CDX2-202ENST00000548877 ADAT1Q9BUB4 502 aaKnown RBP11.05□□□□□ -0.64
CDX2-202ENST00000548877 NDEL1Q9GZM8 345 aa11.05□□□□□ -0.64
CDX2-202ENST00000548877 CCDC90BQ9GZT6 254 aa11.05□□□□□ -0.64
CDX2-202ENST00000548877 SIRT7Q9NRC8 400 aa11.05□□□□□ -0.64
CDX2-202ENST00000548877 C1orf123Q9NWV4 160 aa11.05□□□□□ -0.64
CDX2-202ENST00000548877 IL20Q9NYY1 176 aa11.05□□□□□ -0.64
CDX2-202ENST00000548877 MRPL15Q9P015 296 aaKnown RBP11.05□□□□□ -0.64
CDX2-202ENST00000548877 RSL24D1Q9UHA3 163 aaKnown RBP11.05□□□□□ -0.64
CDX2-202ENST00000548877 PSORS1C1Q9UIG5 152 aa11.05□□□□□ -0.64
CDX2-202ENST00000548877 POLR1DQ9Y2S0 133 aa11.05□□□□□ -0.64
CDX2-202ENST00000548877 RPL36Q9Y3U8 105 aaKnown RBP11.05□□□□□ -0.64
CDX2-202ENST00000548877 CDH10Q9Y6N8 788 aa11.05□□□□□ -0.64
CDX2-202ENST00000548877 COMMD3-BMI1R4GMX3 469 aa11.05□□□□□ -0.64
CDX2-202ENST00000548877 IGLV1-36A0A0B4J1U3 117 aa11.04□□□□□ -0.64
CDX2-202ENST00000548877 MEGF11A6BM72 1044 aa11.04□□□□□ -0.64
CDX2-202ENST00000548877 UNC119BA6NIH7 251 aa11.04□□□□□ -0.64
CDX2-202ENST00000548877 SOX14O95416 240 aa11.04□□□□□ -0.64
CDX2-202ENST00000548877 PAHP00439 452 aa11.04□□□□□ -0.64
CDX2-202ENST00000548877 CRABP1P29762 137 aa11.04□□□□□ -0.64
CDX2-202ENST00000548877 SAA4P35542 130 aa11.04□□□□□ -0.64
CDX2-202ENST00000548877 TGM4P49221 684 aa11.04□□□□□ -0.64
CDX2-202ENST00000548877 MZT1Q08AG7 82 aa11.04□□□□□ -0.64
CDX2-202ENST00000548877 GINS1Q14691 196 aa11.04□□□□□ -0.64
CDX2-202ENST00000548877 ATPAF1Q5TC12 328 aaPredicted RBP11.04□□□□□ -0.64
CDX2-202ENST00000548877 FOXB2Q5VYV0 432 aa11.04□□□□□ -0.64
CDX2-202ENST00000548877 SLC18B1Q6NT16 456 aa11.04□□□□□ -0.64
CDX2-202ENST00000548877 CORO6Q6QEF8 472 aa11.04□□□□□ -0.64
CDX2-202ENST00000548877 CFAP77Q6ZQR2 320 aa11.04□□□□□ -0.64
CDX2-202ENST00000548877 ZNF826PQ6ZT77 177 aa11.04□□□□□ -0.64
CDX2-202ENST00000548877 NAA40Q86UY6 237 aa11.04□□□□□ -0.64
CDX2-202ENST00000548877 FGFRL1Q8N441 504 aa11.04□□□□□ -0.64
CDX2-202ENST00000548877 STX19Q8N4C7 294 aa11.04□□□□□ -0.64
CDX2-202ENST00000548877 C11orf44Q8N8P7 122 aa11.04□□□□□ -0.64
CDX2-202ENST00000548877 WFDC9Q8NEX5 89 aa11.04□□□□□ -0.64
CDX2-202ENST00000548877 SLC26A10Q8NG04 563 aa11.04□□□□□ -0.64
CDX2-202ENST00000548877 OR2T6Q8NHC8 308 aa11.04□□□□□ -0.64
CDX2-202ENST00000548877 WIPF2Q8TF74 440 aaPredicted RBP11.04□□□□□ -0.64
CDX2-202ENST00000548877 APH1BQ8WW43 257 aa11.04□□□□□ -0.64
CDX2-202ENST00000548877 RORBQ92753 470 aa11.04□□□□□ -0.64
CDX2-202ENST00000548877 FAM46AQ96IP4 442 aaKnown RBP11.04□□□□□ -0.64
CDX2-202ENST00000548877 ATF6BQ99941 703 aa11.04□□□□□ -0.64
CDX2-202ENST00000548877 BCL7BQ9BQE9 202 aa11.04□□□□□ -0.64
CDX2-202ENST00000548877 DCTN5Q9BTE1 182 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms