RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 UBAC2Q8NBM4 344 aa8.69□□□□□ -1.02
SMARCD1-205ENST00000548573 NFAM1Q8NET5 270 aaPredicted RBP8.69□□□□□ -1.02
SMARCD1-205ENST00000548573 DECR2Q9NUI1 292 aa8.69□□□□□ -1.02
SMARCD1-205ENST00000548573 PPP4R1LQ9P1A2 415 aa8.69□□□□□ -1.02
SMARCD1-205ENST00000548573 LHX6Q9UPM6 363 aa8.69□□□□□ -1.02
SMARCD1-205ENST00000548573 USP34Q70CQ2 3546 aa8.68□□□□□ -1.02
SMARCD1-205ENST00000548573 IGHV1OR15-9A0A0B4J2B8 117 aa8.68□□□□□ -1.02
SMARCD1-205ENST00000548573 SHISA8B8ZZ34 492 aa8.68□□□□□ -1.02
SMARCD1-205ENST00000548573 C9JQL5 133 aa8.68□□□□□ -1.02
SMARCD1-205ENST00000548573 DUX1O43812 170 aa8.68□□□□□ -1.02
SMARCD1-205ENST00000548573 KNG1P01042 644 aa8.68□□□□□ -1.02
SMARCD1-205ENST00000548573 CTSDP07339 412 aaPredicted RBP8.68□□□□□ -1.02
SMARCD1-205ENST00000548573 CPT2P23786 658 aa8.68□□□□□ -1.02
SMARCD1-205ENST00000548573 PTAFRP25105 342 aa8.68□□□□□ -1.02
SMARCD1-205ENST00000548573 FCGR2CP31995 323 aa8.68□□□□□ -1.02
SMARCD1-205ENST00000548573 CFHR1Q03591 330 aa8.68□□□□□ -1.02
SMARCD1-205ENST00000548573 HABP2Q14520 560 aaPredicted RBP8.68□□□□□ -1.02
SMARCD1-205ENST00000548573 TSC22D1Q15714 1073 aa8.68□□□□□ -1.02
SMARCD1-205ENST00000548573 SWI5Q1ZZU3 235 aa8.68□□□□□ -1.02
SMARCD1-205ENST00000548573 OR2A2Q6IF42 318 aa8.68□□□□□ -1.02
SMARCD1-205ENST00000548573 Q6ZRG5 221 aa8.68□□□□□ -1.02
SMARCD1-205ENST00000548573 KMT5CQ86Y97 462 aa8.68□□□□□ -1.02
SMARCD1-205ENST00000548573 SGPP2Q8IWX5 399 aa8.68□□□□□ -1.02
SMARCD1-205ENST00000548573 ZFP82Q8N141 532 aa8.68□□□□□ -1.02
SMARCD1-205ENST00000548573 FNDC9Q8TBE3 224 aa8.68□□□□□ -1.02
SMARCD1-205ENST00000548573 POC1BQ8TC44 478 aa8.68□□□□□ -1.02
SMARCD1-205ENST00000548573 SLC25A43Q8WUT9 341 aaPredicted RBP8.68□□□□□ -1.02
SMARCD1-205ENST00000548573 RLN3Q8WXF3 142 aa8.68□□□□□ -1.02
SMARCD1-205ENST00000548573 ZNF501Q96CX3 271 aaPredicted RBP8.68□□□□□ -1.02
SMARCD1-205ENST00000548573 CYYR1Q96J86 154 aa8.68□□□□□ -1.02
SMARCD1-205ENST00000548573 OXGR1Q96P68 337 aa8.68□□□□□ -1.02
SMARCD1-205ENST00000548573 PRRX2Q99811 253 aa8.68□□□□□ -1.02
SMARCD1-205ENST00000548573 TUBA4BQ9H853 241 aa8.68□□□□□ -1.02
SMARCD1-205ENST00000548573 PLEKHA2Q9HB19 425 aa8.68□□□□□ -1.02
SMARCD1-205ENST00000548573 PLA2G2EQ9NZK7 142 aa8.68□□□□□ -1.02
SMARCD1-205ENST00000548573 KLRF1Q9NZS2 232 aa8.68□□□□□ -1.02
SMARCD1-205ENST00000548573 FBXL17Q9UF56 701 aa8.68□□□□□ -1.02
SMARCD1-205ENST00000548573 STARD10Q9Y365 291 aa8.68□□□□□ -1.02
SMARCD1-205ENST00000548573 ADAMTS9Q9P2N4 1935 aa8.68□□□□□ -1.02
SMARCD1-205ENST00000548573 LOC102725191A0A1B0GVB3 256 aa8.68□□□□□ -1.02
SMARCD1-205ENST00000548573 METTL12A8MUP2 240 aa8.68□□□□□ -1.02
SMARCD1-205ENST00000548573 EIF3GO75821 320 aaKnown RBP eCLIP8.68□□□□□ -1.02
SMARCD1-205ENST00000548573 IFNA21P01568 189 aa8.68□□□□□ -1.02
SMARCD1-205ENST00000548573 QDPRP09417 244 aa8.68□□□□□ -1.02
SMARCD1-205ENST00000548573 EN2P19622 333 aaPredicted RBP8.68□□□□□ -1.02
SMARCD1-205ENST00000548573 ANOS1P23352 680 aa8.68□□□□□ -1.02
SMARCD1-205ENST00000548573 TMEM33P57088 247 aa8.68□□□□□ -1.02
SMARCD1-205ENST00000548573 ACY1Q03154 408 aa8.68□□□□□ -1.02
SMARCD1-205ENST00000548573 SMAD4Q13485 552 aaKnown RBP8.68□□□□□ -1.02
SMARCD1-205ENST00000548573 SHISA6Q6ZSJ9 500 aa8.68□□□□□ -1.02
SMARCD1-205ENST00000548573 SYT13Q7L8C5 426 aa8.68□□□□□ -1.02
SMARCD1-205ENST00000548573 C1QL2Q7Z5L3 287 aa8.68□□□□□ -1.02
SMARCD1-205ENST00000548573 ANKRD37Q7Z713 158 aa8.68□□□□□ -1.02
SMARCD1-205ENST00000548573 SULF2Q8IWU5 870 aa8.68□□□□□ -1.02
SMARCD1-205ENST00000548573 SEMA6DQ8NFY4 1073 aa8.68□□□□□ -1.02
SMARCD1-205ENST00000548573 OR9K2Q8NGE7 335 aa8.68□□□□□ -1.02
SMARCD1-205ENST00000548573 STT3BQ8TCJ2 826 aa8.68□□□□□ -1.02
SMARCD1-205ENST00000548573 SHDQ96IW2 340 aa8.68□□□□□ -1.02
SMARCD1-205ENST00000548573 ARV1Q9H2C2 271 aa8.68□□□□□ -1.02
SMARCD1-205ENST00000548573 CHRDQ9H2X0 955 aa8.68□□□□□ -1.02
SMARCD1-205ENST00000548573 AMDHD2Q9Y303 409 aa8.68□□□□□ -1.02
SMARCD1-205ENST00000548573 V9GYS6 101 aa8.68□□□□□ -1.02
SMARCD1-205ENST00000548573 IGLV3-12A0A075B6K2 115 aa8.67□□□□□ -1.02
SMARCD1-205ENST00000548573 A0A0U1RQV5 110 aa8.67□□□□□ -1.02
SMARCD1-205ENST00000548573 CRYM-AS1A6NIL9 109 aa8.67□□□□□ -1.02
SMARCD1-205ENST00000548573 C1orf196B1AJZ1 125 aa8.67□□□□□ -1.02
SMARCD1-205ENST00000548573 STMND1H3BQB6 276 aa8.67□□□□□ -1.02
SMARCD1-205ENST00000548573 AGPAT2O15120 278 aa8.67□□□□□ -1.02
SMARCD1-205ENST00000548573 S100A8P05109 93 aa8.67□□□□□ -1.02
SMARCD1-205ENST00000548573 OR8U9P0C7N5 309 aa8.67□□□□□ -1.02
SMARCD1-205ENST00000548573 SMIM6P0DI80 62 aa8.67□□□□□ -1.02
SMARCD1-205ENST00000548573 PTGDSP41222 190 aa8.67□□□□□ -1.02
SMARCD1-205ENST00000548573 UCP2P55851 309 aa8.67□□□□□ -1.02
SMARCD1-205ENST00000548573 RP1P56715 2156 aa8.67□□□□□ -1.02
SMARCD1-205ENST00000548573 LSM6P62312 80 aaKnown RBP8.67□□□□□ -1.02
SMARCD1-205ENST00000548573 Q6ZSR3 168 aa8.67□□□□□ -1.02
SMARCD1-205ENST00000548573 FAM219AQ8IW50 185 aa8.67□□□□□ -1.02
SMARCD1-205ENST00000548573 FOXRED2Q8IWF2 684 aa8.67□□□□□ -1.02
SMARCD1-205ENST00000548573 CCDC54Q8NEL0 328 aa8.67□□□□□ -1.02
SMARCD1-205ENST00000548573 OR8U1Q8NH10 309 aa8.67□□□□□ -1.02
SMARCD1-205ENST00000548573 THAP3Q8WTV1 239 aaPredicted RBP8.67□□□□□ -1.02
SMARCD1-205ENST00000548573 PP6455Q8WZ26 134 aa8.67□□□□□ -1.02
SMARCD1-205ENST00000548573 MAFIPQ8WZ33 124 aa8.67□□□□□ -1.02
SMARCD1-205ENST00000548573 SLC39A7Q92504 469 aa8.67□□□□□ -1.02
SMARCD1-205ENST00000548573 C14orf79Q96F83 325 aa8.67□□□□□ -1.02
SMARCD1-205ENST00000548573 PGAM5Q96HS1 289 aa8.67□□□□□ -1.02
SMARCD1-205ENST00000548573 AKR1E2Q96JD6 320 aa8.67□□□□□ -1.02
SMARCD1-205ENST00000548573 CRB3Q9BUF7 120 aa8.67□□□□□ -1.02
SMARCD1-205ENST00000548573 FGF21Q9NSA1 209 aa8.67□□□□□ -1.02
SMARCD1-205ENST00000548573 FAM212BQ9NTI7 297 aaPredicted RBP8.67□□□□□ -1.02
SMARCD1-205ENST00000548573 C5orf52A6NGY3 159 aa8.66□□□□□ -1.02
SMARCD1-205ENST00000548573 ZNF726A6NNF4 738 aa8.66□□□□□ -1.02
SMARCD1-205ENST00000548573 E9PLN8 166 aa8.66□□□□□ -1.02
SMARCD1-205ENST00000548573 UBE2CO00762 179 aa8.66□□□□□ -1.02
SMARCD1-205ENST00000548573 DHRS3O75911 302 aa8.66□□□□□ -1.02
SMARCD1-205ENST00000548573 MT-ND4LP03901 98 aa8.66□□□□□ -1.02
SMARCD1-205ENST00000548573 ACAA1P09110 424 aaPredicted RBP8.66□□□□□ -1.02
SMARCD1-205ENST00000548573 SEC11BP0C7V7 166 aa8.66□□□□□ -1.02
SMARCD1-205ENST00000548573 NR2C1P13056 603 aa8.66□□□□□ -1.02
SMARCD1-205ENST00000548573 ZNF43P17038 809 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms