RNA–Protein interactions for RNA: ENST00000548211.1

RPAP3-205, Transcript of RNA polymerase II associated protein 3, human

TSL 2

Gene RPAP3, Length 555 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPAP3-205	ENST00000548211	MS4A8	Q9BY19	250 aa		2.57	□□□□□ -2
RPAP3-205	ENST00000548211	AICDA	Q9GZX7	198 aa		2.57	□□□□□ -2
RPAP3-205	ENST00000548211	NXF5	Q9H1B4	397 aa	Known RBP	2.57	□□□□□ -2
RPAP3-205	ENST00000548211	SPNS1	Q9H2V7	528 aa		2.57	□□□□□ -2
RPAP3-205	ENST00000548211	DSN1	Q9H410	356 aa		2.57	□□□□□ -2
RPAP3-205	ENST00000548211	RGCC	Q9H4X1	137 aa		2.57	□□□□□ -2
RPAP3-205	ENST00000548211	TMEM185B	Q9H7F4	350 aa		2.57	□□□□□ -2
RPAP3-205	ENST00000548211	FBXO6	Q9NRD1	293 aa	Predicted RBP	2.57	□□□□□ -2
RPAP3-205	ENST00000548211	PDP1	Q9P0J1	537 aa	Predicted RBP	2.57	□□□□□ -2
RPAP3-205	ENST00000548211	ONECUT1	Q9UBC0	465 aa		2.57	□□□□□ -2
RPAP3-205	ENST00000548211	PEF1	Q9UBV8	284 aa	Known RBP	2.57	□□□□□ -2
RPAP3-205	ENST00000548211	FBXO5	Q9UKT4	447 aa		2.57	□□□□□ -2
RPAP3-205	ENST00000548211	WDR45	Q9Y484	360 aa		2.57	□□□□□ -2
RPAP3-205	ENST00000548211	PPIAL4A	Q9Y536	164 aa		2.57	□□□□□ -2
RPAP3-205	ENST00000548211	SMCO3	A2RU48	225 aa		2.56	□□□□□ -2
RPAP3-205	ENST00000548211	MIF4GD	A9UHW6	222 aa	Known RBP	2.56	□□□□□ -2
RPAP3-205	ENST00000548211		E5RGE8	158 aa		2.56	□□□□□ -2
RPAP3-205	ENST00000548211	TNFSF11	O14788	317 aa		2.56	□□□□□ -2
RPAP3-205	ENST00000548211	CXCL13	O43927	109 aa		2.56	□□□□□ -2
RPAP3-205	ENST00000548211	SAP30	O75446	220 aa		2.56	□□□□□ -2
RPAP3-205	ENST00000548211	LYZL6	O75951	148 aa		2.56	□□□□□ -2
RPAP3-205	ENST00000548211	MB	P02144	154 aa		2.56	□□□□□ -2
RPAP3-205	ENST00000548211	APOA1	P02647	267 aa		2.56	□□□□□ -2
RPAP3-205	ENST00000548211	CLPS	P04118	112 aa		2.56	□□□□□ -2
RPAP3-205	ENST00000548211	S100A6	P06703	90 aa		2.56	□□□□□ -2
RPAP3-205	ENST00000548211	LYN	P07948	512 aa		2.56	□□□□□ -2
RPAP3-205	ENST00000548211	ALOX5	P09917	674 aa		2.56	□□□□□ -2
RPAP3-205	ENST00000548211	GSTT2	P0CG29	244 aa		2.56	□□□□□ -2
RPAP3-205	ENST00000548211	GSTT2B	P0CG30	244 aa		2.56	□□□□□ -2
RPAP3-205	ENST00000548211	STAG3L2	P0CL84	134 aa		2.56	□□□□□ -2
RPAP3-205	ENST00000548211	CPM	P14384	443 aa		2.56	□□□□□ -2
RPAP3-205	ENST00000548211	CSNK2A2	P19784	350 aa	Predicted RBP	2.56	□□□□□ -2
RPAP3-205	ENST00000548211	PGC	P20142	388 aa		2.56	□□□□□ -2
RPAP3-205	ENST00000548211	COX5A	P20674	150 aa		2.56	□□□□□ -2
RPAP3-205	ENST00000548211	UCP1	P25874	307 aa		2.56	□□□□□ -2
RPAP3-205	ENST00000548211	EIF1	P41567	113 aa	Known RBP	2.56	□□□□□ -2
RPAP3-205	ENST00000548211	SLC1A2	P43004	574 aa		2.56	□□□□□ -2
RPAP3-205	ENST00000548211	ALDH3B1	P43353	468 aa		2.56	□□□□□ -2
RPAP3-205	ENST00000548211	GPR6	P46095	362 aa	Predicted RBP	2.56	□□□□□ -2
RPAP3-205	ENST00000548211	RFX3	P48380	749 aa		2.56	□□□□□ -2
RPAP3-205	ENST00000548211	MARCKSL1	P49006	195 aa		2.56	□□□□□ -2
RPAP3-205	ENST00000548211	ZNF83	P51522	516 aa		2.56	□□□□□ -2
RPAP3-205	ENST00000548211	BCAP31	P51572	246 aa		2.56	□□□□□ -2
RPAP3-205	ENST00000548211	XK	P51811	444 aa		2.56	□□□□□ -2
RPAP3-205	ENST00000548211	TMEM33	P57088	247 aa		2.56	□□□□□ -2
RPAP3-205	ENST00000548211	PRPS1	P60891	318 aa		2.56	□□□□□ -2
RPAP3-205	ENST00000548211	CRADD	P78560	199 aa		2.56	□□□□□ -2
RPAP3-205	ENST00000548211	IRF8	Q02556	426 aa		2.56	□□□□□ -2
RPAP3-205	ENST00000548211	BNIP1	Q12981	228 aa		2.56	□□□□□ -2
RPAP3-205	ENST00000548211	BAMBI	Q13145	260 aa		2.56	□□□□□ -2
RPAP3-205	ENST00000548211	MAB21L1	Q13394	359 aa		2.56	□□□□□ -2
RPAP3-205	ENST00000548211	EXOSC2	Q13868	293 aa	Known RBP	2.56	□□□□□ -2
RPAP3-205	ENST00000548211	SPA17	Q15506	151 aa		2.56	□□□□□ -2
RPAP3-205	ENST00000548211	SPHAR	Q15513	63 aa		2.56	□□□□□ -2
RPAP3-205	ENST00000548211	ZNHIT3	Q15649	155 aa	Predicted RBP	2.56	□□□□□ -2
RPAP3-205	ENST00000548211	NNAT	Q16517	81 aa		2.56	□□□□□ -2
RPAP3-205	ENST00000548211	TAF9	Q16594	264 aa		2.56	□□□□□ -2
RPAP3-205	ENST00000548211	PPP1R3A	Q16821	1122 aa		2.56	□□□□□ -2
RPAP3-205	ENST00000548211	FAM83E	Q2M2I3	478 aa		2.56	□□□□□ -2
RPAP3-205	ENST00000548211	HIKESHI	Q53FT3	197 aa		2.56	□□□□□ -2
RPAP3-205	ENST00000548211	CDKL4	Q5MAI5	379 aa		2.56	□□□□□ -2
RPAP3-205	ENST00000548211	LGSN	Q5TDP6	509 aa		2.56	□□□□□ -2
RPAP3-205	ENST00000548211	LIPJ	Q5W064	366 aa		2.56	□□□□□ -2
RPAP3-205	ENST00000548211	PLCXD3	Q63HM9	321 aa		2.56	□□□□□ -2
RPAP3-205	ENST00000548211	ZNF770	Q6IQ21	691 aa	Predicted RBP	2.56	□□□□□ -2
RPAP3-205	ENST00000548211	ACSM5	Q6NUN0	579 aa		2.56	□□□□□ -2
RPAP3-205	ENST00000548211	KCNIP4	Q6PIL6	250 aa		2.56	□□□□□ -2
RPAP3-205	ENST00000548211	FCRLA	Q7L513	359 aa		2.56	□□□□□ -2
RPAP3-205	ENST00000548211	VTCN1	Q7Z7D3	282 aa		2.56	□□□□□ -2
RPAP3-205	ENST00000548211	PRUNE1	Q86TP1	453 aa		2.56	□□□□□ -2
RPAP3-205	ENST00000548211	TPRA1	Q86W33	373 aa		2.56	□□□□□ -2
RPAP3-205	ENST00000548211	SLC38A6	Q8IZM9	456 aa		2.56	□□□□□ -2
RPAP3-205	ENST00000548211	PRSS35	Q8N3Z0	413 aa		2.56	□□□□□ -2
RPAP3-205	ENST00000548211	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	2.56	□□□□□ -2
RPAP3-205	ENST00000548211	C17orf78	Q8N4C9	275 aa		2.56	□□□□□ -2
RPAP3-205	ENST00000548211	FAM89B	Q8N5H3	189 aa		2.56	□□□□□ -2
RPAP3-205	ENST00000548211	OR4F15	Q8NGB8	312 aa		2.56	□□□□□ -2
RPAP3-205	ENST00000548211	CLHC1	Q8NHS4	586 aa		2.56	□□□□□ -2
RPAP3-205	ENST00000548211	MITD1	Q8WV92	249 aa		2.56	□□□□□ -2
RPAP3-205	ENST00000548211	TMEM37	Q8WXS4	190 aa		2.56	□□□□□ -2
RPAP3-205	ENST00000548211	SGK3	Q96BR1	496 aa		2.56	□□□□□ -2
RPAP3-205	ENST00000548211	WDR34	Q96EX3	536 aa		2.56	□□□□□ -2
RPAP3-205	ENST00000548211	PRRC1	Q96M27	445 aa		2.56	□□□□□ -2
RPAP3-205	ENST00000548211	PANX1	Q96RD7	426 aa		2.56	□□□□□ -2
RPAP3-205	ENST00000548211	ZNF717	Q9BY31	904 aa	Predicted RBP	2.56	□□□□□ -2
RPAP3-205	ENST00000548211	TBL1XR1	Q9BZK7	514 aa		2.56	□□□□□ -2
RPAP3-205	ENST00000548211	ROPN1B	Q9BZX4	212 aa	Predicted RBP	2.56	□□□□□ -2
RPAP3-205	ENST00000548211	DNTTIP1	Q9H147	329 aa		2.56	□□□□□ -2
RPAP3-205	ENST00000548211	AUNIP	Q9H7T9	357 aa		2.56	□□□□□ -2
RPAP3-205	ENST00000548211		Q9H8V8	135 aa		2.56	□□□□□ -2
RPAP3-205	ENST00000548211	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	2.56	□□□□□ -2
RPAP3-205	ENST00000548211	ELOVL3	Q9HB03	270 aa		2.56	□□□□□ -2
RPAP3-205	ENST00000548211	C3orf14	Q9HBI5	128 aa		2.56	□□□□□ -2
RPAP3-205	ENST00000548211	SPACA1	Q9HBV2	294 aa		2.56	□□□□□ -2
RPAP3-205	ENST00000548211	DYNLRB1	Q9NP97	96 aa		2.56	□□□□□ -2
RPAP3-205	ENST00000548211	TREM1	Q9NP99	234 aa		2.56	□□□□□ -2
RPAP3-205	ENST00000548211	C20orf96	Q9NUD7	363 aa	Predicted RBP	2.56	□□□□□ -2
RPAP3-205	ENST00000548211	AHSP	Q9NZD4	102 aa		2.56	□□□□□ -2
RPAP3-205	ENST00000548211	MED11	Q9P086	117 aa		2.56	□□□□□ -2
RPAP3-205	ENST00000548211	EMC3	Q9P0I2	261 aa		2.56	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms