RNA–Protein interactions for RNA: ENST00000546588.1

VPS29-203, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-203ENST00000546588 NR4A1P22736 598 aa7.3□□□□□ -1.24
VPS29-203ENST00000546588 IGHV1-2P23083 117 aa7.3□□□□□ -1.24
VPS29-203ENST00000546588 SDC2P34741 201 aa7.3□□□□□ -1.24
VPS29-203ENST00000546588 ARR3P36575 388 aa7.3□□□□□ -1.24
VPS29-203ENST00000546588 TAGLN2P37802 199 aaKnown RBP7.3□□□□□ -1.24
VPS29-203ENST00000546588 PSMB10P40306 273 aa7.3□□□□□ -1.24
VPS29-203ENST00000546588 SERPINB10P48595 397 aa7.3□□□□□ -1.24
VPS29-203ENST00000546588 RORCP51449 518 aa7.3□□□□□ -1.24
VPS29-203ENST00000546588 LUMP51884 338 aaPredicted RBP7.3□□□□□ -1.24
VPS29-203ENST00000546588 PSG4Q00888 419 aa7.3□□□□□ -1.24
VPS29-203ENST00000546588 P2RY6Q15077 328 aa7.3□□□□□ -1.24
VPS29-203ENST00000546588 GABRA6Q16445 453 aa7.3□□□□□ -1.24
VPS29-203ENST00000546588 TBRG1Q3YBR2 411 aa7.3□□□□□ -1.24
VPS29-203ENST00000546588 SLC36A2Q495M3 483 aa7.3□□□□□ -1.24
VPS29-203ENST00000546588 ASPHD2Q6ICH7 369 aa7.3□□□□□ -1.24
VPS29-203ENST00000546588 PLXDC2Q6UX71 529 aa7.3□□□□□ -1.24
VPS29-203ENST00000546588 ZNF813Q6ZN06 617 aa7.3□□□□□ -1.24
VPS29-203ENST00000546588 P4HA3Q7Z4N8 544 aa7.3□□□□□ -1.24
VPS29-203ENST00000546588 ZNF100Q8IYN0 542 aa7.3□□□□□ -1.24
VPS29-203ENST00000546588 MINDY2Q8NBR6 621 aa7.3□□□□□ -1.24
VPS29-203ENST00000546588 OR52H1Q8NGJ2 320 aa7.3□□□□□ -1.24
VPS29-203ENST00000546588 OR6Q1Q8NGQ2 317 aa7.3□□□□□ -1.24
VPS29-203ENST00000546588 STARD4Q96DR4 205 aa7.3□□□□□ -1.24
VPS29-203ENST00000546588 LRRC46Q96FV0 321 aa7.3□□□□□ -1.24
VPS29-203ENST00000546588 OR14A2Q96R54 314 aa7.3□□□□□ -1.24
VPS29-203ENST00000546588 DCUN1D5Q9BTE7 237 aa7.3□□□□□ -1.24
VPS29-203ENST00000546588 C1QTNF5Q9BXJ0 243 aa7.3□□□□□ -1.24
VPS29-203ENST00000546588 HDHD5Q9BXW7 423 aa7.3□□□□□ -1.24
VPS29-203ENST00000546588 AKIP1Q9NQ31 210 aa7.3□□□□□ -1.24
VPS29-203ENST00000546588 PLEKHB1Q9UF11 243 aaPredicted RBP7.3□□□□□ -1.24
VPS29-203ENST00000546588 HHLA2Q9UM44 414 aa7.3□□□□□ -1.24
VPS29-203ENST00000546588 FOXJ3Q9UPW0 622 aa7.3□□□□□ -1.24
VPS29-203ENST00000546588 SLC22A13Q9Y226 551 aa7.3□□□□□ -1.24
VPS29-203ENST00000546588 POLR1DQ9Y2S0 133 aa7.3□□□□□ -1.24
VPS29-203ENST00000546588 HCFC1P51610 2035 aa7.29□□□□□ -1.24
VPS29-203ENST00000546588 A0A1B0GTI1 187 aa7.29□□□□□ -1.24
VPS29-203ENST00000546588 H0Y8G0 127 aa7.29□□□□□ -1.24
VPS29-203ENST00000546588 M0R135 149 aa7.29□□□□□ -1.24
VPS29-203ENST00000546588 NOS1APO75052 506 aaPredicted RBP7.29□□□□□ -1.24
VPS29-203ENST00000546588 IGKV3-15P01624 115 aa7.29□□□□□ -1.24
VPS29-203ENST00000546588 ANXA2P07355 339 aaKnown RBP7.29□□□□□ -1.24
VPS29-203ENST00000546588 ZNF12P17014 697 aa7.29□□□□□ -1.24
VPS29-203ENST00000546588 HSD11B1P28845 292 aa7.29□□□□□ -1.24
VPS29-203ENST00000546588 CX3CR1P49238 355 aa7.29□□□□□ -1.24
VPS29-203ENST00000546588 FOXG1P55316 489 aaPredicted RBP7.29□□□□□ -1.24
VPS29-203ENST00000546588 LSM3P62310 102 aaKnown RBP7.29□□□□□ -1.24
VPS29-203ENST00000546588 TGFBR3Q03167 851 aa7.29□□□□□ -1.24
VPS29-203ENST00000546588 SLC3A1Q07837 685 aa7.29□□□□□ -1.24
VPS29-203ENST00000546588 INSL4Q14641 139 aa7.29□□□□□ -1.24
VPS29-203ENST00000546588 BCL2L15Q5TBC7 163 aa7.29□□□□□ -1.24
VPS29-203ENST00000546588 OTPQ5XKR4 325 aa7.29□□□□□ -1.24
VPS29-203ENST00000546588 FAM166AQ6J272 317 aa7.29□□□□□ -1.24
VPS29-203ENST00000546588 VWA1Q6PCB0 445 aa7.29□□□□□ -1.24
VPS29-203ENST00000546588 METAP1DQ6UB28 335 aaPredicted RBP7.29□□□□□ -1.24
VPS29-203ENST00000546588 SSX8Q7RTT4 187 aa7.29□□□□□ -1.24
VPS29-203ENST00000546588 SLC16A14Q7RTX9 510 aa7.29□□□□□ -1.24
VPS29-203ENST00000546588 MRGPRGQ86SM5 289 aa7.29□□□□□ -1.24
VPS29-203ENST00000546588 DOLPP1Q86YN1 238 aa7.29□□□□□ -1.24
VPS29-203ENST00000546588 ZNF584Q8IVC4 421 aa7.29□□□□□ -1.24
VPS29-203ENST00000546588 ZNF433Q8N7K0 673 aaPredicted RBP7.29□□□□□ -1.24
VPS29-203ENST00000546588 OR8B12Q8NGG6 310 aa7.29□□□□□ -1.24
VPS29-203ENST00000546588 OR13C5Q8NGS8 318 aa7.29□□□□□ -1.24
VPS29-203ENST00000546588 OR1F12Q8NHA8 337 aa7.29□□□□□ -1.24
VPS29-203ENST00000546588 FGFBP3Q8TAT2 258 aa7.29□□□□□ -1.24
VPS29-203ENST00000546588 SSC4DQ8WTU2 575 aa7.29□□□□□ -1.24
VPS29-203ENST00000546588 ACOT12Q8WYK0 555 aa7.29□□□□□ -1.24
VPS29-203ENST00000546588 TMEM203Q969S6 136 aa7.29□□□□□ -1.24
VPS29-203ENST00000546588 ZNF799Q96GE5 643 aa7.29□□□□□ -1.24
VPS29-203ENST00000546588 KCNS3Q9BQ31 491 aa7.29□□□□□ -1.24
VPS29-203ENST00000546588 MRI1Q9BV20 369 aa7.29□□□□□ -1.24
VPS29-203ENST00000546588 PBOV1Q9GZY1 135 aa7.29□□□□□ -1.24
VPS29-203ENST00000546588 OR10A2Q9H208 303 aa7.29□□□□□ -1.24
VPS29-203ENST00000546588 PIGMQ9H3S5 423 aa7.29□□□□□ -1.24
VPS29-203ENST00000546588 RGCCQ9H4X1 137 aa7.29□□□□□ -1.24
VPS29-203ENST00000546588 EXOSC4Q9NPD3 245 aaKnown RBP7.29□□□□□ -1.24
VPS29-203ENST00000546588 ZNF71Q9NQZ8 489 aaPredicted RBP7.29□□□□□ -1.24
VPS29-203ENST00000546588 PLEK2Q9NYT0 353 aa7.29□□□□□ -1.24
VPS29-203ENST00000546588 UPB1Q9UBR1 384 aa7.29□□□□□ -1.24
VPS29-203ENST00000546588 ZNF629Q9UEG4 869 aaPredicted RBP7.29□□□□□ -1.24
VPS29-203ENST00000546588 RHBDD3Q9Y3P4 386 aa7.29□□□□□ -1.24
VPS29-203ENST00000546588 V9GYS6 101 aa7.29□□□□□ -1.24
VPS29-203ENST00000546588 PNMA8CA0A1B0GUJ8 204 aa7.28□□□□□ -1.24
VPS29-203ENST00000546588 LOC107986453A0A1B0GWG9 222 aa7.28□□□□□ -1.24
VPS29-203ENST00000546588 C5orf51A6NDU8 294 aa7.28□□□□□ -1.24
VPS29-203ENST00000546588 E9PLN8 166 aa7.28□□□□□ -1.24
VPS29-203ENST00000546588 UBE2CO00762 179 aa7.28□□□□□ -1.24
VPS29-203ENST00000546588 SLC19A2O60779 497 aa7.28□□□□□ -1.24
VPS29-203ENST00000546588 RPP14O95059 124 aaKnown RBP7.28□□□□□ -1.24
VPS29-203ENST00000546588 CDRT1O95170 752 aa7.28□□□□□ -1.24
VPS29-203ENST00000546588 IGLV1-44P01699 117 aa7.28□□□□□ -1.24
VPS29-203ENST00000546588 PLA2G1BP04054 148 aaKnown RBP7.28□□□□□ -1.24
VPS29-203ENST00000546588 TPOP07202 933 aa7.28□□□□□ -1.24
VPS29-203ENST00000546588 OCM2P0CE71 109 aa7.28□□□□□ -1.24
VPS29-203ENST00000546588 VSIG10L2P0DP72 767 aa7.28□□□□□ -1.24
VPS29-203ENST00000546588 ZNF14P17017 642 aaPredicted RBP7.28□□□□□ -1.24
VPS29-203ENST00000546588 SRMP19623 302 aa7.28□□□□□ -1.24
VPS29-203ENST00000546588 PSMB1P20618 241 aaKnown RBP7.28□□□□□ -1.24
VPS29-203ENST00000546588 ANOS1P23352 680 aa7.28□□□□□ -1.24
VPS29-203ENST00000546588 MYL9P24844 172 aa7.28□□□□□ -1.24
VPS29-203ENST00000546588 ZNF121P58317 390 aaPredicted RBP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms