RNA–Protein interactions for RNA: ENST00000546345.5

CCDC60-205, Transcript of coiled-coil domain containing 60, humanhuman

TSL 1 (best)

Gene CCDC60, Length 865 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-205ENST00000546345 LTB4RQ15722 352 aa5.68□□□□□ -1.5
CCDC60-205ENST00000546345 GTDC1Q4AE62 458 aa5.68□□□□□ -1.5
CCDC60-205ENST00000546345 SYT14P1Q58G82 188 aa5.68□□□□□ -1.5
CCDC60-205ENST00000546345 FBXO48Q5FWF7 155 aa5.68□□□□□ -1.5
CCDC60-205ENST00000546345 HES5Q5TA89 166 aa5.68□□□□□ -1.5
CCDC60-205ENST00000546345 BCL2L15Q5TBC7 163 aa5.68□□□□□ -1.5
CCDC60-205ENST00000546345 OLFML2AQ68BL7 652 aa5.68□□□□□ -1.5
CCDC60-205ENST00000546345 HIST2H2AA3Q6FI13 130 aa5.68□□□□□ -1.5
CCDC60-205ENST00000546345 C3orf33Q6P1S2 294 aa5.68□□□□□ -1.5
CCDC60-205ENST00000546345 C1orf94Q6P1W5 598 aa5.68□□□□□ -1.5
CCDC60-205ENST00000546345 ZNF600Q6ZNG1 722 aa5.68□□□□□ -1.5
CCDC60-205ENST00000546345 BHLHA15Q7RTS1 189 aaPredicted RBP5.68□□□□□ -1.5
CCDC60-205ENST00000546345 ZNF551Q7Z340 670 aaPredicted RBP5.68□□□□□ -1.5
CCDC60-205ENST00000546345 STX12Q86Y82 276 aa5.68□□□□□ -1.5
CCDC60-205ENST00000546345 ZNF527Q8NB42 609 aa5.68□□□□□ -1.5
CCDC60-205ENST00000546345 DMBX1Q8NFW5 382 aa5.68□□□□□ -1.5
CCDC60-205ENST00000546345 MOSPD2Q8NHP6 518 aa5.68□□□□□ -1.5
CCDC60-205ENST00000546345 GNPDA2Q8TDQ7 276 aa5.68□□□□□ -1.5
CCDC60-205ENST00000546345 RNF128Q8TEB7 428 aa5.68□□□□□ -1.5
CCDC60-205ENST00000546345 SMIM4Q8WVI0 70 aa5.68□□□□□ -1.5
CCDC60-205ENST00000546345 RAB40AQ8WXH6 277 aa5.68□□□□□ -1.5
CCDC60-205ENST00000546345 OSTF1Q92882 214 aa5.68□□□□□ -1.5
CCDC60-205ENST00000546345 UBE2E3Q969T4 207 aa5.68□□□□□ -1.5
CCDC60-205ENST00000546345 RNFT2Q96EX2 444 aa5.68□□□□□ -1.5
CCDC60-205ENST00000546345 IL4I1Q96RQ9 567 aa5.68□□□□□ -1.5
CCDC60-205ENST00000546345 GAL3ST1Q99999 423 aa5.68□□□□□ -1.5
CCDC60-205ENST00000546345 NKX6-2Q9C056 277 aaPredicted RBP5.68□□□□□ -1.5
CCDC60-205ENST00000546345 ALX4Q9H161 411 aaPredicted RBP5.68□□□□□ -1.5
CCDC60-205ENST00000546345 REEP4Q9H6H4 257 aa5.68□□□□□ -1.5
CCDC60-205ENST00000546345 MYOZ1Q9NP98 299 aaPredicted RBP5.68□□□□□ -1.5
CCDC60-205ENST00000546345 TRIM36Q9NQ86 728 aa5.68□□□□□ -1.5
CCDC60-205ENST00000546345 ACSS1Q9NUB1 689 aaPredicted RBP5.68□□□□□ -1.5
CCDC60-205ENST00000546345 COA4Q9NYJ1 87 aa5.68□□□□□ -1.5
CCDC60-205ENST00000546345 FLRT3Q9NZU0 649 aa5.68□□□□□ -1.5
CCDC60-205ENST00000546345 RPS6KB2Q9UBS0 482 aa5.68□□□□□ -1.5
CCDC60-205ENST00000546345 TMEM5Q9Y2B1 443 aa5.68□□□□□ -1.5
CCDC60-205ENST00000546345 SLC9A8Q9Y2E8 581 aa5.68□□□□□ -1.5
CCDC60-205ENST00000546345 HYDINQ4G0P3 5121 aa5.68□□□□□ -1.5
CCDC60-205ENST00000546345 NOTCH3Q9UM47 2321 aa5.67□□□□□ -1.5
CCDC60-205ENST00000546345 LOC105371242A0A075B767 164 aa5.67□□□□□ -1.5
CCDC60-205ENST00000546345 A0A0G2JPF8 293 aa5.67□□□□□ -1.5
CCDC60-205ENST00000546345 CIB4A0PJX0 185 aa5.67□□□□□ -1.5
CCDC60-205ENST00000546345 TMEM218A2RU14 115 aa5.67□□□□□ -1.5
CCDC60-205ENST00000546345 HNRNPCL3B7ZW38 293 aa5.67□□□□□ -1.5
CCDC60-205ENST00000546345 H3BN98 237 aa5.67□□□□□ -1.5
CCDC60-205ENST00000546345 GABARAPH6UMI1 98 aa5.67□□□□□ -1.5
CCDC60-205ENST00000546345 DNASE2O00115 360 aaPredicted RBP5.67□□□□□ -1.5
CCDC60-205ENST00000546345 PHYHO14832 338 aa5.67□□□□□ -1.5
CCDC60-205ENST00000546345 PLPP2O43688 288 aa5.67□□□□□ -1.5
CCDC60-205ENST00000546345 TRIAP1O43715 76 aa5.67□□□□□ -1.5
CCDC60-205ENST00000546345 KHDRBS3O75525 346 aaKnown RBP5.67□□□□□ -1.5
CCDC60-205ENST00000546345 OR2F2O95006 317 aa5.67□□□□□ -1.5
CCDC60-205ENST00000546345 HIST1H2ABP04908 130 aa5.67□□□□□ -1.5
CCDC60-205ENST00000546345 GRPP07492 148 aa5.67□□□□□ -1.5
CCDC60-205ENST00000546345 HNRNPCL4P0DMR1 293 aa5.67□□□□□ -1.5
CCDC60-205ENST00000546345 PGCP20142 388 aa5.67□□□□□ -1.5
CCDC60-205ENST00000546345 IGHV1-2P23083 117 aa5.67□□□□□ -1.5
CCDC60-205ENST00000546345 HTR2AP28223 471 aa5.67□□□□□ -1.5
CCDC60-205ENST00000546345 SHC1P29353 583 aa5.67□□□□□ -1.5
CCDC60-205ENST00000546345 BTCP35070 178 aa5.67□□□□□ -1.5
CCDC60-205ENST00000546345 SLC1A3P43003 542 aa5.67□□□□□ -1.5
CCDC60-205ENST00000546345 HAAOP46952 286 aa5.67□□□□□ -1.5
CCDC60-205ENST00000546345 FABP6P51161 128 aa5.67□□□□□ -1.5
CCDC60-205ENST00000546345 CRYBA2P53672 197 aa5.67□□□□□ -1.5
CCDC60-205ENST00000546345 ACTC1P68032 377 aa5.67□□□□□ -1.5
CCDC60-205ENST00000546345 ACTA1P68133 377 aa5.67□□□□□ -1.5
CCDC60-205ENST00000546345 FABP5Q01469 135 aa5.67□□□□□ -1.5
CCDC60-205ENST00000546345 MXD1Q05195 221 aa5.67□□□□□ -1.5
CCDC60-205ENST00000546345 TGM3Q08188 693 aa5.67□□□□□ -1.5
CCDC60-205ENST00000546345 ZNF763Q0D2J5 394 aa5.67□□□□□ -1.5
CCDC60-205ENST00000546345 BIKQ13323 160 aa5.67□□□□□ -1.5
CCDC60-205ENST00000546345 OR2F1Q13607 317 aa5.67□□□□□ -1.5
CCDC60-205ENST00000546345 GANABQ14697 944 aaKnown RBP5.67□□□□□ -1.5
CCDC60-205ENST00000546345 P2RY14Q15391 338 aa5.67□□□□□ -1.5
CCDC60-205ENST00000546345 HMGN3Q15651 99 aa5.67□□□□□ -1.5
CCDC60-205ENST00000546345 ZNF239Q16600 458 aaKnown RBP5.67□□□□□ -1.5
CCDC60-205ENST00000546345 PRICKLE4Q2TBC4 344 aa5.67□□□□□ -1.5
CCDC60-205ENST00000546345 SLC36A2Q495M3 483 aa5.67□□□□□ -1.5
CCDC60-205ENST00000546345 C10orf91Q5T1B1 145 aa5.67□□□□□ -1.5
CCDC60-205ENST00000546345 IDNKQ5T6J7 187 aa5.67□□□□□ -1.5
CCDC60-205ENST00000546345 KHDRBS2Q5VWX1 349 aaKnown RBP5.67□□□□□ -1.5
CCDC60-205ENST00000546345 DHRS7BQ6IAN0 325 aaPredicted RBP5.67□□□□□ -1.5
CCDC60-205ENST00000546345 GRHL2Q6ISB3 625 aa5.67□□□□□ -1.5
CCDC60-205ENST00000546345 SLC22A25Q6T423 547 aa5.67□□□□□ -1.5
CCDC60-205ENST00000546345 GSG1LQ6UXU4 331 aa5.67□□□□□ -1.5
CCDC60-205ENST00000546345 NPSR1Q6W5P4 371 aa5.67□□□□□ -1.5
CCDC60-205ENST00000546345 GLDNQ6ZMI3 551 aaPredicted RBP5.67□□□□□ -1.5
CCDC60-205ENST00000546345 HIST3H2AQ7L7L0 130 aa5.67□□□□□ -1.5
CCDC60-205ENST00000546345 TSEN54Q7Z6J9 526 aaKnown RBP5.67□□□□□ -1.5
CCDC60-205ENST00000546345 SAMD14Q8IZD0 417 aaPredicted RBP5.67□□□□□ -1.5
CCDC60-205ENST00000546345 C12orf45Q8N5I9 185 aaPredicted RBP5.67□□□□□ -1.5
CCDC60-205ENST00000546345 C7orf57Q8NEG2 295 aa5.67□□□□□ -1.5
CCDC60-205ENST00000546345 PXT1Q8NFP0 134 aa5.67□□□□□ -1.5
CCDC60-205ENST00000546345 OR4K17Q8NGC6 315 aa5.67□□□□□ -1.5
CCDC60-205ENST00000546345 OR11H4Q8NGC9 324 aa5.67□□□□□ -1.5
CCDC60-205ENST00000546345 HUS1BQ8NHY5 278 aa5.67□□□□□ -1.5
CCDC60-205ENST00000546345 HIST1H2ACQ93077 130 aa5.67□□□□□ -1.5
CCDC60-205ENST00000546345 NARS2Q96I59 477 aaKnown RBP5.67□□□□□ -1.5
CCDC60-205ENST00000546345 LINC00052Q96N35 136 aa5.67□□□□□ -1.5
CCDC60-205ENST00000546345 ZNF582Q96NG8 517 aaPredicted RBP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms