RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 RPL22L1Q6P5R6 122 aaKnown RBP7□□□□□ -1.29
UBR1-202ENST00000546274 FIGLAQ6QHK4 219 aa7□□□□□ -1.29
UBR1-202ENST00000546274 LYG2Q86SG7 212 aa7□□□□□ -1.29
UBR1-202ENST00000546274 DND1Q8IYX4 353 aaKnown RBP7□□□□□ -1.29
UBR1-202ENST00000546274 CA13Q8N1Q1 262 aa7□□□□□ -1.29
UBR1-202ENST00000546274 FAM71E2Q8N5Q1 922 aa7□□□□□ -1.29
UBR1-202ENST00000546274 NPEPL1Q8NDH3 523 aa7□□□□□ -1.29
UBR1-202ENST00000546274 C15orf40Q8WUR7 153 aa7□□□□□ -1.29
UBR1-202ENST00000546274 HLA-CQ95604 372 aa7□□□□□ -1.29
UBR1-202ENST00000546274 SEH1LQ96EE3 360 aa7□□□□□ -1.29
UBR1-202ENST00000546274 SLC25A21Q9BQT8 299 aaPredicted RBP7□□□□□ -1.29
UBR1-202ENST00000546274 ZNF2Q9BSG1 426 aaPredicted RBP7□□□□□ -1.29
UBR1-202ENST00000546274 NMNAT2Q9BZQ4 307 aa7□□□□□ -1.29
UBR1-202ENST00000546274 CYP8B1Q9UNU6 501 aa7□□□□□ -1.29
UBR1-202ENST00000546274 VSIG4Q9Y279 399 aa7□□□□□ -1.29
UBR1-202ENST00000546274 MTCH2Q9Y6C9 303 aa7□□□□□ -1.29
UBR1-202ENST00000546274 VAMP5O95183 116 aa6.99□□□□□ -1.29
UBR1-202ENST00000546274 LCATP04180 440 aa6.99□□□□□ -1.29
UBR1-202ENST00000546274 CTSBP07858 339 aa6.99□□□□□ -1.29
UBR1-202ENST00000546274 OR5H8P0DN80 308 aa6.99□□□□□ -1.29
UBR1-202ENST00000546274 PVRP15151 417 aa6.99□□□□□ -1.29
UBR1-202ENST00000546274 GRPRP30550 384 aa6.99□□□□□ -1.29
UBR1-202ENST00000546274 GPR18Q14330 331 aa6.99□□□□□ -1.29
UBR1-202ENST00000546274 TMPRSS7Q7RTY8 843 aa6.99□□□□□ -1.29
UBR1-202ENST00000546274 ZNF761Q86XN6 746 aaPredicted RBP6.99□□□□□ -1.29
UBR1-202ENST00000546274 KMT5CQ86Y97 462 aa6.99□□□□□ -1.29
UBR1-202ENST00000546274 ZNF101Q8IZC7 436 aa6.99□□□□□ -1.29
UBR1-202ENST00000546274 GCNT2Q8N0V5 402 aa6.99□□□□□ -1.29
UBR1-202ENST00000546274 OR52R1Q8NGF1 315 aa6.99□□□□□ -1.29
UBR1-202ENST00000546274 TSACCQ96A04 125 aaPredicted RBP6.99□□□□□ -1.29
UBR1-202ENST00000546274 ZNF845Q96IR2 970 aaPredicted RBP6.99□□□□□ -1.29
UBR1-202ENST00000546274 SLC6A7Q99884 636 aa6.99□□□□□ -1.29
UBR1-202ENST00000546274 RBM7Q9Y580 266 aaKnown RBP6.99□□□□□ -1.29
UBR1-202ENST00000546274 IER3IP1Q9Y5U9 82 aa6.99□□□□□ -1.29
UBR1-202ENST00000546274 ZNF320A2RRD8 509 aa6.99□□□□□ -1.29
UBR1-202ENST00000546274 XKRY2A2RUG3 117 aa6.99□□□□□ -1.29
UBR1-202ENST00000546274 TGFBR3LH3BV60 316 aa6.99□□□□□ -1.29
UBR1-202ENST00000546274 HRKO00198 91 aa6.99□□□□□ -1.29
UBR1-202ENST00000546274 XKRYO14609 159 aa6.99□□□□□ -1.29
UBR1-202ENST00000546274 IFI6P09912 130 aa6.99□□□□□ -1.29
UBR1-202ENST00000546274 CEACAM1P13688 526 aa6.99□□□□□ -1.29
UBR1-202ENST00000546274 COL9A1P20849 921 aa6.99□□□□□ -1.29
UBR1-202ENST00000546274 GABRR1P24046 479 aa6.99□□□□□ -1.29
UBR1-202ENST00000546274 GXYLT1Q4G148 440 aa6.99□□□□□ -1.29
UBR1-202ENST00000546274 COL5A1-AS1Q5SY13 56 aa6.99□□□□□ -1.29
UBR1-202ENST00000546274 AWAT2Q6E213 333 aa6.99□□□□□ -1.29
UBR1-202ENST00000546274 RPUSD3Q6P087 351 aaKnown RBP6.99□□□□□ -1.29
UBR1-202ENST00000546274 CFAP161Q6P656 301 aa6.99□□□□□ -1.29
UBR1-202ENST00000546274 FAM160A2Q8N612 972 aaPredicted RBP6.99□□□□□ -1.29
UBR1-202ENST00000546274 PGAM5Q96HS1 289 aa6.99□□□□□ -1.29
UBR1-202ENST00000546274 NMNAT3Q96T66 252 aa6.99□□□□□ -1.29
UBR1-202ENST00000546274 ZFYVE21Q9BQ24 234 aa6.99□□□□□ -1.29
UBR1-202ENST00000546274 LMF2Q9BU23 707 aaKnown RBP6.99□□□□□ -1.29
UBR1-202ENST00000546274 RNF150Q9ULK6 438 aa6.99□□□□□ -1.29
UBR1-202ENST00000546274 POLR3KQ9Y2Y1 108 aaPredicted RBP6.99□□□□□ -1.29
UBR1-202ENST00000546274 A0A0U1RQV5 110 aa6.99□□□□□ -1.29
UBR1-202ENST00000546274 A6NIZ1 184 aa6.99□□□□□ -1.29
UBR1-202ENST00000546274 C17orf105B2RV13 164 aa6.99□□□□□ -1.29
UBR1-202ENST00000546274 ZNF736B4DX44 427 aaPredicted RBP6.99□□□□□ -1.29
UBR1-202ENST00000546274 ZFPL1O95159 310 aa6.99□□□□□ -1.29
UBR1-202ENST00000546274 NDUFB2O95178 105 aa6.99□□□□□ -1.29
UBR1-202ENST00000546274 CYB5AP00167 134 aa6.99□□□□□ -1.29
UBR1-202ENST00000546274 APODP05090 189 aa6.99□□□□□ -1.29
UBR1-202ENST00000546274 IGFBP4P22692 258 aa6.99□□□□□ -1.29
UBR1-202ENST00000546274 ZBTB25P24278 435 aa6.99□□□□□ -1.29
UBR1-202ENST00000546274 BMI1P35226 326 aa6.99□□□□□ -1.29
UBR1-202ENST00000546274 TAS2R19P59542 299 aa6.99□□□□□ -1.29
UBR1-202ENST00000546274 ACTBP60709 375 aa6.99□□□□□ -1.29
UBR1-202ENST00000546274 RAP1BP61224 184 aa6.99□□□□□ -1.29
UBR1-202ENST00000546274 RPS4XP62701 263 aaKnown RBP6.99□□□□□ -1.29
UBR1-202ENST00000546274 ACTG1P63261 375 aa6.99□□□□□ -1.29
UBR1-202ENST00000546274 SRSF4Q08170 494 aaKnown RBP6.99□□□□□ -1.29
UBR1-202ENST00000546274 MRPL49Q13405 166 aaKnown RBP6.99□□□□□ -1.29
UBR1-202ENST00000546274 GAS6Q14393 721 aa6.99□□□□□ -1.29
UBR1-202ENST00000546274 TMEM196Q5HYL7 178 aa6.99□□□□□ -1.29
UBR1-202ENST00000546274 C1orf194Q5T5A4 169 aa6.99□□□□□ -1.29
UBR1-202ENST00000546274 LINC01590Q5TEZ4 76 aa6.99□□□□□ -1.29
UBR1-202ENST00000546274 RNF44Q7L0R7 432 aa6.99□□□□□ -1.29
UBR1-202ENST00000546274 RD3Q7Z3Z2 195 aa6.99□□□□□ -1.29
UBR1-202ENST00000546274 NUFIP2Q7Z417 695 aaKnown RBP6.99□□□□□ -1.29
UBR1-202ENST00000546274 SFTPA2Q8IWL1 248 aa6.99□□□□□ -1.29
UBR1-202ENST00000546274 ARHGEF39Q8N4T4 335 aa6.99□□□□□ -1.29
UBR1-202ENST00000546274 ADAD2Q8NCV1 583 aaKnown RBP6.99□□□□□ -1.29
UBR1-202ENST00000546274 OR1P1Q8NH06 330 aa6.99□□□□□ -1.29
UBR1-202ENST00000546274 OR10G6Q8NH81 332 aa6.99□□□□□ -1.29
UBR1-202ENST00000546274 RNASEH2CQ8TDP1 164 aaKnown RBP6.99□□□□□ -1.29
UBR1-202ENST00000546274 CDC6Q99741 560 aa6.99□□□□□ -1.29
UBR1-202ENST00000546274 STARD5Q9NSY2 213 aa6.99□□□□□ -1.29
UBR1-202ENST00000546274 SLC2A8Q9NY64 477 aa6.99□□□□□ -1.29
UBR1-202ENST00000546274 B3GAT1Q9P2W7 334 aa6.99□□□□□ -1.29
UBR1-202ENST00000546274 TMEM131Q92545 1883 aa6.99□□□□□ -1.29
UBR1-202ENST00000546274 A0A1W2PQF6 199 aa6.98□□□□□ -1.29
UBR1-202ENST00000546274 TRAPPC6AO75865 159 aa6.98□□□□□ -1.29
UBR1-202ENST00000546274 ADRA2CP18825 462 aa6.98□□□□□ -1.29
UBR1-202ENST00000546274 CD33P20138 364 aa6.98□□□□□ -1.29
UBR1-202ENST00000546274 TUBG1P23258 451 aa6.98□□□□□ -1.29
UBR1-202ENST00000546274 ALDH3B1P43353 468 aa6.98□□□□□ -1.29
UBR1-202ENST00000546274 PPICP45877 212 aa6.98□□□□□ -1.29
UBR1-202ENST00000546274 ZNF880Q6PDB4 577 aa6.98□□□□□ -1.29
UBR1-202ENST00000546274 STAC2Q6ZMT1 411 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms