RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 OR5AS1Q8N127 324 aa13.66□□□□□ -0.22
PRPF40A-212ENST00000545856 BHLHE23Q8NDY6 225 aa13.66□□□□□ -0.22
PRPF40A-212ENST00000545856 OR6M1Q8NGM8 313 aa13.66□□□□□ -0.22
PRPF40A-212ENST00000545856 SLC25A46Q96AG3 418 aa13.66□□□□□ -0.22
PRPF40A-212ENST00000545856 SORCS2Q96PQ0 1159 aa13.66□□□□□ -0.22
PRPF40A-212ENST00000545856 CXXC4Q9H2H0 198 aa13.66□□□□□ -0.22
PRPF40A-212ENST00000545856 RHOFQ9HBH0 211 aa13.66□□□□□ -0.22
PRPF40A-212ENST00000545856 CCDC59Q9P031 241 aaKnown RBP13.66□□□□□ -0.22
PRPF40A-212ENST00000545856 A3GALT2U3KPV4 340 aa13.66□□□□□ -0.22
PRPF40A-212ENST00000545856 PMF1-BGLAPU3KQ54 211 aa13.66□□□□□ -0.22
PRPF40A-212ENST00000545856 V9GY05 133 aa13.66□□□□□ -0.22
PRPF40A-212ENST00000545856 C17orf100A8MU93 164 aa13.65□□□□□ -0.22
PRPF40A-212ENST00000545856 IFNL4K9M1U5 179 aa13.65□□□□□ -0.22
PRPF40A-212ENST00000545856 LMX1BO60663 402 aa13.65□□□□□ -0.22
PRPF40A-212ENST00000545856 CDRT1O95170 752 aa13.65□□□□□ -0.22
PRPF40A-212ENST00000545856 HCKP08631 526 aa13.65□□□□□ -0.22
PRPF40A-212ENST00000545856 UBBP0CG47 229 aa13.65□□□□□ -0.22
PRPF40A-212ENST00000545856 CA6P23280 308 aa13.65□□□□□ -0.22
PRPF40A-212ENST00000545856 ZNF93P35789 620 aaPredicted RBP13.65□□□□□ -0.22
PRPF40A-212ENST00000545856 ALDH3B1P43353 468 aa13.65□□□□□ -0.22
PRPF40A-212ENST00000545856 MAGEB1P43366 347 aa13.65□□□□□ -0.22
PRPF40A-212ENST00000545856 GATA4P43694 442 aa13.65□□□□□ -0.22
PRPF40A-212ENST00000545856 SRP9P49458 86 aaKnown RBP13.65□□□□□ -0.22
PRPF40A-212ENST00000545856 TESK1Q15569 626 aa13.65□□□□□ -0.22
PRPF40A-212ENST00000545856 DDI2Q5TDH0 399 aa13.65□□□□□ -0.22
PRPF40A-212ENST00000545856 MOB3CQ70IA8 216 aa13.65□□□□□ -0.22
PRPF40A-212ENST00000545856 LYPD6Q86Y78 171 aa13.65□□□□□ -0.22
PRPF40A-212ENST00000545856 ZSCAN4Q8NAM6 433 aaPredicted RBP13.65□□□□□ -0.22
PRPF40A-212ENST00000545856 ACOT12Q8WYK0 555 aa13.65□□□□□ -0.22
PRPF40A-212ENST00000545856 SYT3Q9BQG1 590 aa13.65□□□□□ -0.22
PRPF40A-212ENST00000545856 PKIBQ9C010 78 aa13.65□□□□□ -0.22
PRPF40A-212ENST00000545856 EGLN1Q9GZT9 426 aa13.65□□□□□ -0.22
PRPF40A-212ENST00000545856 CLEC4MQ9H2X3 399 aaPredicted RBP13.65□□□□□ -0.22
PRPF40A-212ENST00000545856 TPK1Q9H3S4 243 aa13.65□□□□□ -0.22
PRPF40A-212ENST00000545856 DYNLRB1Q9NP97 96 aa13.65□□□□□ -0.22
PRPF40A-212ENST00000545856 PCDHB16Q9NRJ7 776 aa13.65□□□□□ -0.22
PRPF40A-212ENST00000545856 IL19Q9UHD0 177 aa13.65□□□□□ -0.22
PRPF40A-212ENST00000545856 EDARQ9UNE0 448 aa13.65□□□□□ -0.22
PRPF40A-212ENST00000545856 IGKV1-9A0A0C4DH69 117 aa13.64□□□□□ -0.23
PRPF40A-212ENST00000545856 A0A1W2PPK0 400 aa13.64□□□□□ -0.23
PRPF40A-212ENST00000545856 PQLC2LA1A4F0 135 aa13.64□□□□□ -0.23
PRPF40A-212ENST00000545856 LRP5LA4QPB2 252 aa13.64□□□□□ -0.23
PRPF40A-212ENST00000545856 H3BSH0 61 aa13.64□□□□□ -0.23
PRPF40A-212ENST00000545856 AIPO00170 330 aa13.64□□□□□ -0.23
PRPF40A-212ENST00000545856 PLAUP00749 431 aa13.64□□□□□ -0.23
PRPF40A-212ENST00000545856 ACAA1P09110 424 aaPredicted RBP13.64□□□□□ -0.23
PRPF40A-212ENST00000545856 DANCRP0C864 163 aa13.64□□□□□ -0.23
PRPF40A-212ENST00000545856 TNFRSF1AP19438 455 aa13.64□□□□□ -0.23
PRPF40A-212ENST00000545856 RORCP51449 518 aa13.64□□□□□ -0.23
PRPF40A-212ENST00000545856 LSM3P62310 102 aaKnown RBP13.64□□□□□ -0.23
PRPF40A-212ENST00000545856 KISS1Q15726 138 aa13.64□□□□□ -0.23
PRPF40A-212ENST00000545856 FAM189A2Q15884 450 aa13.64□□□□□ -0.23
PRPF40A-212ENST00000545856 CEP78Q5JTW2 689 aa13.64□□□□□ -0.23
PRPF40A-212ENST00000545856 C1orf100Q5SVJ3 147 aa13.64□□□□□ -0.23
PRPF40A-212ENST00000545856 LRP11Q86VZ4 500 aa13.64□□□□□ -0.23
PRPF40A-212ENST00000545856 SAXO1Q8IYX7 474 aa13.64□□□□□ -0.23
PRPF40A-212ENST00000545856 HPSE2Q8WWQ2 592 aa13.64□□□□□ -0.23
PRPF40A-212ENST00000545856 TLNRD1Q9H1K6 362 aa13.64□□□□□ -0.23
PRPF40A-212ENST00000545856 GPR173Q9NS66 373 aa13.64□□□□□ -0.23
PRPF40A-212ENST00000545856 PLEKHB1Q9UF11 243 aaPredicted RBP13.64□□□□□ -0.23
PRPF40A-212ENST00000545856 TANC2Q9HCD6 1990 aa13.64□□□□□ -0.23
PRPF40A-212ENST00000545856 A1L4Q6 167 aa13.63□□□□□ -0.23
PRPF40A-212ENST00000545856 SLC17A2O00624 439 aa13.63□□□□□ -0.23
PRPF40A-212ENST00000545856 MLNRO43193 412 aa13.63□□□□□ -0.23
PRPF40A-212ENST00000545856 ZNF780AO75290 641 aaPredicted RBP13.63□□□□□ -0.23
PRPF40A-212ENST00000545856 CYB5AP00167 134 aa13.63□□□□□ -0.23
PRPF40A-212ENST00000545856 MAS1P04201 325 aa13.63□□□□□ -0.23
PRPF40A-212ENST00000545856 ADRA2CP18825 462 aa13.63□□□□□ -0.23
PRPF40A-212ENST00000545856 MPZP25189 248 aa13.63□□□□□ -0.23
PRPF40A-212ENST00000545856 BMXP51813 675 aa13.63□□□□□ -0.23
PRPF40A-212ENST00000545856 ALKBH6Q3KRA9 238 aa13.63□□□□□ -0.23
PRPF40A-212ENST00000545856 TMEM255AQ5JRV8 349 aa13.63□□□□□ -0.23
PRPF40A-212ENST00000545856 SFXN4Q6P4A7 337 aa13.63□□□□□ -0.23
PRPF40A-212ENST00000545856 TMEM200AQ86VY9 491 aa13.63□□□□□ -0.23
PRPF40A-212ENST00000545856 PXT1Q8NFP0 134 aa13.63□□□□□ -0.23
PRPF40A-212ENST00000545856 OR51A2Q8NGJ7 313 aa13.63□□□□□ -0.23
PRPF40A-212ENST00000545856 DYNC2LI1Q8TCX1 351 aa13.63□□□□□ -0.23
PRPF40A-212ENST00000545856 ELMOD3Q96FG2 381 aa13.63□□□□□ -0.23
PRPF40A-212ENST00000545856 POM121Q96HA1 1249 aa13.63□□□□□ -0.23
PRPF40A-212ENST00000545856 RNF170Q96K19 258 aa13.63□□□□□ -0.23
PRPF40A-212ENST00000545856 TRAF4Q9BUZ4 470 aaPredicted RBP13.63□□□□□ -0.23
PRPF40A-212ENST00000545856 ABRACLQ9P1F3 81 aa13.63□□□□□ -0.23
PRPF40A-212ENST00000545856 FZR1Q9UM11 496 aa13.63□□□□□ -0.23
PRPF40A-212ENST00000545856 POLDIP2Q9Y2S7 368 aa13.63□□□□□ -0.23
PRPF40A-212ENST00000545856 DCHS2Q6V1P9 2916 aa13.63□□□□□ -0.23
PRPF40A-212ENST00000545856 SHISA3A0PJX4 238 aa13.62□□□□□ -0.23
PRPF40A-212ENST00000545856 ZSCAN5BA6NJL1 495 aa13.62□□□□□ -0.23
PRPF40A-212ENST00000545856 IFITM5A6NNB3 132 aa13.62□□□□□ -0.23
PRPF40A-212ENST00000545856 H7C417 338 aa13.62□□□□□ -0.23
PRPF40A-212ENST00000545856 ZNF182P17025 639 aaPredicted RBP13.62□□□□□ -0.23
PRPF40A-212ENST00000545856 RPS19P39019 145 aaKnown RBP13.62□□□□□ -0.23
PRPF40A-212ENST00000545856 MTCP1P56278 107 aa13.62□□□□□ -0.23
PRPF40A-212ENST00000545856 GPR176Q14439 515 aa13.62□□□□□ -0.23
PRPF40A-212ENST00000545856 SPCS2Q15005 226 aa13.62□□□□□ -0.23
PRPF40A-212ENST00000545856 DGUOKQ16854 277 aa13.62□□□□□ -0.23
PRPF40A-212ENST00000545856 MST1LQ2TV78 715 aa13.62□□□□□ -0.23
PRPF40A-212ENST00000545856 FOXB2Q5VYV0 432 aa13.62□□□□□ -0.23
PRPF40A-212ENST00000545856 C11orf71Q6IPW1 123 aa13.62□□□□□ -0.23
PRPF40A-212ENST00000545856 FAM166AQ6J272 317 aa13.62□□□□□ -0.23
PRPF40A-212ENST00000545856 Q6ZR03 302 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms