RNA–Protein interactions for RNA: ENST00000545718.2

SCAP-215, Transcript of SREBF chaperone, humanhuman

TSL 5 BASIC

Gene SCAP, Length 2,950 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-215ENST00000545718 SPTSSAQ969W0 71 aa13.69□□□□□ -0.22
SCAP-215ENST00000545718 GPR132Q9UNW8 380 aa13.69□□□□□ -0.22
SCAP-215ENST00000545718 LOC102723996A0A087X1L8 192 aa13.69□□□□□ -0.22
SCAP-215ENST00000545718 IGHV3-9P01782 118 aa13.69□□□□□ -0.22
SCAP-215ENST00000545718 SERPINA5P05154 406 aa13.69□□□□□ -0.22
SCAP-215ENST00000545718 SFTPBP07988 381 aa13.69□□□□□ -0.22
SCAP-215ENST00000545718 CD63P08962 238 aa13.69□□□□□ -0.22
SCAP-215ENST00000545718 PRKACBP22694 351 aa13.69□□□□□ -0.22
SCAP-215ENST00000545718 RSPO1Q2MKA7 263 aaPredicted RBP13.69□□□□□ -0.22
SCAP-215ENST00000545718 ZNF774Q6NX45 483 aa13.69□□□□□ -0.22
SCAP-215ENST00000545718 FAHD2BQ6P2I3 314 aaPredicted RBP13.69□□□□□ -0.22
SCAP-215ENST00000545718 BRICD5Q6PL45 260 aa13.69□□□□□ -0.22
SCAP-215ENST00000545718 ARRDC1Q8N5I2 433 aa13.69□□□□□ -0.22
SCAP-215ENST00000545718 TMEM230Q96A57 120 aa13.69□□□□□ -0.22
SCAP-215ENST00000545718 NABP1Q96AH0 204 aa13.69□□□□□ -0.22
SCAP-215ENST00000545718 FAHD2AQ96GK7 314 aa13.69□□□□□ -0.22
SCAP-215ENST00000545718 VAMP5O95183 116 aa13.68□□□□□ -0.22
SCAP-215ENST00000545718 ONECUT2O95948 504 aa13.68□□□□□ -0.22
SCAP-215ENST00000545718 ZNF345Q14585 488 aa13.68□□□□□ -0.22
SCAP-215ENST00000545718 PAQR8Q8TEZ7 354 aa13.68□□□□□ -0.22
SCAP-215ENST00000545718 ARPC5LQ9BPX5 153 aa13.68□□□□□ -0.22
SCAP-215ENST00000545718 PIGQQ9BRB3 760 aa13.68□□□□□ -0.22
SCAP-215ENST00000545718 PECRQ9BY49 303 aa13.68□□□□□ -0.22
SCAP-215ENST00000545718 ZNF700Q9H0M5 742 aa13.68□□□□□ -0.22
SCAP-215ENST00000545718 ZC4H2Q9NQZ6 224 aa13.68□□□□□ -0.22
SCAP-215ENST00000545718 MED9Q9NWA0 146 aa13.68□□□□□ -0.22
SCAP-215ENST00000545718 LOC102725191A0A1B0GVB3 256 aa13.68□□□□□ -0.22
SCAP-215ENST00000545718 ZNHIT1O43257 154 aa13.68□□□□□ -0.22
SCAP-215ENST00000545718 CXCL13O43927 109 aa13.68□□□□□ -0.22
SCAP-215ENST00000545718 MTRF1O75570 445 aaKnown RBP13.68□□□□□ -0.22
SCAP-215ENST00000545718 CSTBP04080 98 aaKnown RBP13.68□□□□□ -0.22
SCAP-215ENST00000545718 P04436 131 aa13.68□□□□□ -0.22
SCAP-215ENST00000545718 MPZP25189 248 aa13.68□□□□□ -0.22
SCAP-215ENST00000545718 THBS4P35443 961 aa13.68□□□□□ -0.22
SCAP-215ENST00000545718 TAF9Q16594 264 aa13.68□□□□□ -0.22
SCAP-215ENST00000545718 HSD17B13Q7Z5P4 300 aaPredicted RBP13.68□□□□□ -0.22
SCAP-215ENST00000545718 C20orf196Q8IYI0 205 aa13.68□□□□□ -0.22
SCAP-215ENST00000545718 TMEM123Q8N131 208 aa13.68□□□□□ -0.22
SCAP-215ENST00000545718 MRPS24Q96EL2 167 aaKnown RBP13.68□□□□□ -0.22
SCAP-215ENST00000545718 NECAB3Q96P71 396 aaPredicted RBP13.68□□□□□ -0.22
SCAP-215ENST00000545718 FLVCR1Q9Y5Y0 555 aa13.68□□□□□ -0.22
SCAP-215ENST00000545718 SGCEO43556 437 aa13.68□□□□□ -0.22
SCAP-215ENST00000545718 CBR3O75828 277 aa13.68□□□□□ -0.22
SCAP-215ENST00000545718 PNLIPRP3Q17RR3 467 aa13.68□□□□□ -0.22
SCAP-215ENST00000545718 ANKRD55Q3KP44 614 aa13.68□□□□□ -0.22
SCAP-215ENST00000545718 VAX1Q5SQQ9 334 aa13.68□□□□□ -0.22
SCAP-215ENST00000545718 ATRAIDQ6UW56 229 aa13.68□□□□□ -0.22
SCAP-215ENST00000545718 OVCH2Q7RTZ1 564 aa13.68□□□□□ -0.22
SCAP-215ENST00000545718 ZIC4Q8N9L1 334 aa13.68□□□□□ -0.22
SCAP-215ENST00000545718 CHST5Q9GZS9 411 aa13.68□□□□□ -0.22
SCAP-215ENST00000545718 CCDC187A0A096LP49 1063 aa13.67□□□□□ -0.22
SCAP-215ENST00000545718 PRF1P14222 555 aa13.67□□□□□ -0.22
SCAP-215ENST00000545718 CNR1P21554 472 aa13.67□□□□□ -0.22
SCAP-215ENST00000545718 CPT2P23786 658 aa13.67□□□□□ -0.22
SCAP-215ENST00000545718 ACKR3P25106 362 aa13.67□□□□□ -0.22
SCAP-215ENST00000545718 OPRM1P35372 400 aa13.67□□□□□ -0.22
SCAP-215ENST00000545718 CARD18P57730 90 aa13.67□□□□□ -0.22
SCAP-215ENST00000545718 RAC1P63000 192 aa13.67□□□□□ -0.22
SCAP-215ENST00000545718 FAM189A2Q15884 450 aa13.67□□□□□ -0.22
SCAP-215ENST00000545718 ACTBL2Q562R1 376 aa13.67□□□□□ -0.22
SCAP-215ENST00000545718 PAN3Q58A45 887 aaKnown RBP13.67□□□□□ -0.22
SCAP-215ENST00000545718 WIPI1Q5MNZ9 446 aaPredicted RBP13.67□□□□□ -0.22
SCAP-215ENST00000545718 TMEM200AQ86VY9 491 aa13.67□□□□□ -0.22
SCAP-215ENST00000545718 TMEM54Q969K7 222 aa13.67□□□□□ -0.22
SCAP-215ENST00000545718 SGK3Q96BR1 496 aa13.67□□□□□ -0.22
SCAP-215ENST00000545718 IGKV1D-8A0A087WSZ0 117 aa13.67□□□□□ -0.22
SCAP-215ENST00000545718 FAM221AA4D161 298 aa13.67□□□□□ -0.22
SCAP-215ENST00000545718 LAMTOR5O43504 91 aa13.67□□□□□ -0.22
SCAP-215ENST00000545718 SFT2D2O95562 160 aa13.67□□□□□ -0.22
SCAP-215ENST00000545718 RFPL3SP0C7P2 107 aa13.67□□□□□ -0.22
SCAP-215ENST00000545718 RRADP55042 308 aa13.67□□□□□ -0.22
SCAP-215ENST00000545718 RIPPLY1Q0D2K3 151 aa13.67□□□□□ -0.22
SCAP-215ENST00000545718 C10orf128Q5T292 105 aa13.67□□□□□ -0.22
SCAP-215ENST00000545718 TMED6Q8WW62 240 aa13.67□□□□□ -0.22
SCAP-215ENST00000545718 PP6455Q8WZ26 134 aa13.67□□□□□ -0.22
SCAP-215ENST00000545718 RRNAD1Q96FB5 475 aaKnown RBP13.67□□□□□ -0.22
SCAP-215ENST00000545718 OCSTAMPQ9BR26 566 aa13.67□□□□□ -0.22
SCAP-215ENST00000545718 RTBDNQ9BSG5 229 aaPredicted RBP13.67□□□□□ -0.22
SCAP-215ENST00000545718 ZNF581Q9P0T4 197 aa13.67□□□□□ -0.22
SCAP-215ENST00000545718 MCTS1Q9ULC4 181 aaKnown RBP13.67□□□□□ -0.22
SCAP-215ENST00000545718 H0YIZ8 118 aa13.66□□□□□ -0.22
SCAP-215ENST00000545718 HLA-GP17693 338 aa13.66□□□□□ -0.22
SCAP-215ENST00000545718 RFC3P40938 356 aa13.66□□□□□ -0.22
SCAP-215ENST00000545718 PDCD1Q15116 288 aa13.66□□□□□ -0.22
SCAP-215ENST00000545718 RSU1Q15404 277 aa13.66□□□□□ -0.22
SCAP-215ENST00000545718 SPERTQ8NA61 448 aa13.66□□□□□ -0.22
SCAP-215ENST00000545718 SEMA6DQ8NFY4 1073 aa13.66□□□□□ -0.22
SCAP-215ENST00000545718 OR1S2Q8NGQ3 325 aa13.66□□□□□ -0.22
SCAP-215ENST00000545718 OR51F2Q8NH61 342 aa13.66□□□□□ -0.22
SCAP-215ENST00000545718 M1APQ8TC57 530 aa13.66□□□□□ -0.22
SCAP-215ENST00000545718 HAS2Q92819 552 aa13.66□□□□□ -0.22
SCAP-215ENST00000545718 TOMM40LQ969M1 308 aa13.66□□□□□ -0.22
SCAP-215ENST00000545718 NUDT16L1Q9BRJ7 211 aaKnown RBP13.66□□□□□ -0.22
SCAP-215ENST00000545718 SHARPINQ9H0F6 387 aa13.66□□□□□ -0.22
SCAP-215ENST00000545718 PRO3102Q9H379 93 aa13.66□□□□□ -0.22
SCAP-215ENST00000545718 PCDHB10Q9UN67 800 aa13.66□□□□□ -0.22
SCAP-215ENST00000545718 MSGN1A6NI15 193 aa13.66□□□□□ -0.22
SCAP-215ENST00000545718 GLI4P10075 376 aa13.66□□□□□ -0.22
SCAP-215ENST00000545718 TCN2P20062 427 aa13.66□□□□□ -0.22
SCAP-215ENST00000545718 FPR2P25090 351 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms