RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 PIGLQ9Y2B2 252 aa13.86□□□□□ -0.19
LDLR-204ENST00000545707 B3GALT1Q9Y5Z6 326 aa13.86□□□□□ -0.19
LDLR-204ENST00000545707 EML6Q6ZMW3 1958 aa13.86□□□□□ -0.19
LDLR-204ENST00000545707 CELSR3Q9NYQ7 3312 aa13.85□□□□□ -0.19
LDLR-204ENST00000545707 IGLV3-32A0A0A0MS00 114 aa13.85□□□□□ -0.19
LDLR-204ENST00000545707 DHRS7CA6NNS2 312 aa13.85□□□□□ -0.19
LDLR-204ENST00000545707 ECH1Q13011 328 aa13.85□□□□□ -0.19
LDLR-204ENST00000545707 Q7L0L9 218 aa13.85□□□□□ -0.19
LDLR-204ENST00000545707 POC1AQ8NBT0 407 aa13.85□□□□□ -0.19
LDLR-204ENST00000545707 NAXEQ8NCW5 288 aa13.85□□□□□ -0.19
LDLR-204ENST00000545707 C2orf50Q96LR7 162 aa13.85□□□□□ -0.19
LDLR-204ENST00000545707 CNTNAP3BQ96NU0 1288 aa13.85□□□□□ -0.19
LDLR-204ENST00000545707 PHF7Q9BWX1 381 aaPredicted RBP13.85□□□□□ -0.19
LDLR-204ENST00000545707 CHRDQ9H2X0 955 aa13.85□□□□□ -0.19
LDLR-204ENST00000545707 FOXI3A8MTJ6 420 aaPredicted RBP13.85□□□□□ -0.19
LDLR-204ENST00000545707 LRP3O75074 770 aa13.85□□□□□ -0.19
LDLR-204ENST00000545707 CSTBP04080 98 aaKnown RBP13.85□□□□□ -0.19
LDLR-204ENST00000545707 SERPINA5P05154 406 aa13.85□□□□□ -0.19
LDLR-204ENST00000545707 PNLIPP16233 465 aa13.85□□□□□ -0.19
LDLR-204ENST00000545707 PRKACAP17612 351 aa13.85□□□□□ -0.19
LDLR-204ENST00000545707 NME2P22392 152 aa13.85□□□□□ -0.19
LDLR-204ENST00000545707 GRB2P62993 217 aaKnown RBP13.85□□□□□ -0.19
LDLR-204ENST00000545707 NAAAQ02083 359 aa13.85□□□□□ -0.19
LDLR-204ENST00000545707 ENDOGQ14249 297 aaKnown RBP13.85□□□□□ -0.19
LDLR-204ENST00000545707 CCDC157Q569K6 752 aa13.85□□□□□ -0.19
LDLR-204ENST00000545707 CLEC9AQ6UXN8 241 aa13.85□□□□□ -0.19
LDLR-204ENST00000545707 ADPRHL1Q8NDY3 354 aa13.85□□□□□ -0.19
LDLR-204ENST00000545707 SLC22A8Q8TCC7 542 aa13.85□□□□□ -0.19
LDLR-204ENST00000545707 JSRP1Q96MG2 331 aaPredicted RBP13.85□□□□□ -0.19
LDLR-204ENST00000545707 SLC5A7Q9GZV3 580 aa13.85□□□□□ -0.19
LDLR-204ENST00000545707 CHCHD2Q9Y6H1 151 aaPredicted RBP13.85□□□□□ -0.19
LDLR-204ENST00000545707 ADAMTS20P59510 1910 aa13.85□□□□□ -0.19
LDLR-204ENST00000545707 IGHV5-10-1A0A0J9YXX1 117 aa13.84□□□□□ -0.19
LDLR-204ENST00000545707 ANGPTL7O43827 346 aa13.84□□□□□ -0.19
LDLR-204ENST00000545707 FBXO24O75426 580 aa13.84□□□□□ -0.19
LDLR-204ENST00000545707 FARS2O95363 451 aaKnown RBP13.84□□□□□ -0.19
LDLR-204ENST00000545707 NFYBP25208 207 aa13.84□□□□□ -0.19
LDLR-204ENST00000545707 GUCA1AP43080 201 aaPredicted RBP13.84□□□□□ -0.19
LDLR-204ENST00000545707 CSNK1A1P48729 337 aa13.84□□□□□ -0.19
LDLR-204ENST00000545707 RRADP55042 308 aa13.84□□□□□ -0.19
LDLR-204ENST00000545707 CHAF1BQ13112 559 aa13.84□□□□□ -0.19
LDLR-204ENST00000545707 KCNMB1Q16558 191 aa13.84□□□□□ -0.19
LDLR-204ENST00000545707 ZNF385CQ66K41 422 aaPredicted RBP13.84□□□□□ -0.19
LDLR-204ENST00000545707 IQCF2Q8IXL9 164 aa13.84□□□□□ -0.19
LDLR-204ENST00000545707 OR2AE1Q8NHA4 323 aa13.84□□□□□ -0.19
LDLR-204ENST00000545707 PARP12Q9H0J9 701 aaKnown RBP13.84□□□□□ -0.19
LDLR-204ENST00000545707 OCIAD1Q9NX40 245 aa13.84□□□□□ -0.19
LDLR-204ENST00000545707 ADAMTS9Q9P2N4 1935 aa13.84□□□□□ -0.19
LDLR-204ENST00000545707 NAT2P11245 290 aa13.84□□□□□ -0.19
LDLR-204ENST00000545707 PRF1P14222 555 aa13.84□□□□□ -0.19
LDLR-204ENST00000545707 SPEM2Q0P670 501 aa13.84□□□□□ -0.19
LDLR-204ENST00000545707 COL19A1Q14993 1142 aa13.84□□□□□ -0.19
LDLR-204ENST00000545707 SNAI3Q3KNW1 292 aa13.84□□□□□ -0.19
LDLR-204ENST00000545707 BRICD5Q6PL45 260 aa13.84□□□□□ -0.19
LDLR-204ENST00000545707 SEMA6DQ8NFY4 1073 aa13.84□□□□□ -0.19
LDLR-204ENST00000545707 DNASE2BQ8WZ79 361 aa13.84□□□□□ -0.19
LDLR-204ENST00000545707 AQP10Q96PS8 301 aa13.84□□□□□ -0.19
LDLR-204ENST00000545707 S100A13Q99584 98 aa13.84□□□□□ -0.19
LDLR-204ENST00000545707 ZNF2Q9BSG1 426 aaPredicted RBP13.84□□□□□ -0.19
LDLR-204ENST00000545707 SMIM3Q9BZL3 60 aa13.84□□□□□ -0.19
LDLR-204ENST00000545707 GPR173Q9NS66 373 aa13.84□□□□□ -0.19
LDLR-204ENST00000545707 UQCC1Q9NVA1 299 aa13.84□□□□□ -0.19
LDLR-204ENST00000545707 LPAR3Q9UBY5 353 aa13.84□□□□□ -0.19
LDLR-204ENST00000545707 H7C2Y5 167 aa13.83□□□□□ -0.19
LDLR-204ENST00000545707 MSTNO14793 375 aa13.83□□□□□ -0.19
LDLR-204ENST00000545707 TLX3O43711 291 aaPredicted RBP13.83□□□□□ -0.19
LDLR-204ENST00000545707 GLI4P10075 376 aa13.83□□□□□ -0.19
LDLR-204ENST00000545707 MUC1P15941 1255 aaPredicted RBP13.83□□□□□ -0.19
LDLR-204ENST00000545707 MSR1P21757 451 aa13.83□□□□□ -0.19
LDLR-204ENST00000545707 LPAR6P43657 344 aa13.83□□□□□ -0.19
LDLR-204ENST00000545707 RBM39Q14498 530 aaKnown RBP13.83□□□□□ -0.19
LDLR-204ENST00000545707 IAH1Q2TAA2 248 aaPredicted RBP13.83□□□□□ -0.19
LDLR-204ENST00000545707 HFEQ30201 348 aa13.83□□□□□ -0.19
LDLR-204ENST00000545707 CCDC74BQ96LY2 380 aa13.83□□□□□ -0.19
LDLR-204ENST00000545707 NECAB3Q96P71 396 aaPredicted RBP13.83□□□□□ -0.19
LDLR-204ENST00000545707 PCED1AQ9H1Q7 454 aa13.83□□□□□ -0.19
LDLR-204ENST00000545707 MMP26Q9NRE1 261 aa13.83□□□□□ -0.19
LDLR-204ENST00000545707 PLA2G2EQ9NZK7 142 aa13.83□□□□□ -0.19
LDLR-204ENST00000545707 SPRY1O43609 319 aaPredicted RBP13.83□□□□□ -0.2
LDLR-204ENST00000545707 NDUFA2O43678 99 aa13.83□□□□□ -0.2
LDLR-204ENST00000545707 DHRS3O75911 302 aa13.83□□□□□ -0.2
LDLR-204ENST00000545707 DKK1O94907 266 aa13.83□□□□□ -0.2
LDLR-204ENST00000545707 LYL1P12980 280 aa13.83□□□□□ -0.2
LDLR-204ENST00000545707 CBX5P45973 191 aa13.83□□□□□ -0.2
LDLR-204ENST00000545707 TAS2R46P59540 309 aa13.83□□□□□ -0.2
LDLR-204ENST00000545707 SLC35A1P78382 337 aa13.83□□□□□ -0.2
LDLR-204ENST00000545707 IL15RAQ13261 267 aa13.83□□□□□ -0.2
LDLR-204ENST00000545707 C20orf196Q8IYI0 205 aa13.83□□□□□ -0.2
LDLR-204ENST00000545707 FADS6Q8N9I5 356 aa13.83□□□□□ -0.2
LDLR-204ENST00000545707 GJC3Q8NFK1 279 aa13.83□□□□□ -0.2
LDLR-204ENST00000545707 SHDQ96IW2 340 aa13.83□□□□□ -0.2
LDLR-204ENST00000545707 SCGB3A2Q96PL1 93 aa13.83□□□□□ -0.2
LDLR-204ENST00000545707 PIGQQ9BRB3 760 aa13.83□□□□□ -0.2
LDLR-204ENST00000545707 RHOFQ9HBH0 211 aa13.83□□□□□ -0.2
LDLR-204ENST00000545707 PLEKHJ1Q9NW61 149 aa13.83□□□□□ -0.2
LDLR-204ENST00000545707 HDGFL3Q9Y3E1 203 aa13.83□□□□□ -0.2
LDLR-204ENST00000545707 ZNF708P17019 499 aa13.82□□□□□ -0.2
LDLR-204ENST00000545707 OPRM1P35372 400 aa13.82□□□□□ -0.2
LDLR-204ENST00000545707 PJVKQ0ZLH3 352 aa13.82□□□□□ -0.2
LDLR-204ENST00000545707 CDCP2Q5VXM1 449 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms