RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 SAR1AQ9NR31 198 aa11.81□□□□□ -0.52
RTN3-214ENST00000545432 DNAH7Q8WXX0 4024 aa11.81□□□□□ -0.52
RTN3-214ENST00000545432 C17orf98A8MV24 154 aa11.8□□□□□ -0.52
RTN3-214ENST00000545432 F2RL2O00254 374 aa11.8□□□□□ -0.52
RTN3-214ENST00000545432 MTRF1O75570 445 aaKnown RBP11.8□□□□□ -0.52
RTN3-214ENST00000545432 PF4V1P10720 104 aa11.8□□□□□ -0.52
RTN3-214ENST00000545432 GNALP38405 381 aa11.8□□□□□ -0.52
RTN3-214ENST00000545432 VDAC2P45880 294 aaPredicted RBP11.8□□□□□ -0.52
RTN3-214ENST00000545432 SLC15A1P46059 708 aa11.8□□□□□ -0.52
RTN3-214ENST00000545432 ENTPD1P49961 510 aa11.8□□□□□ -0.52
RTN3-214ENST00000545432 DLX6P56179 175 aa11.8□□□□□ -0.52
RTN3-214ENST00000545432 LGALS4P56470 323 aa11.8□□□□□ -0.52
RTN3-214ENST00000545432 LIPEQ05469 1076 aa11.8□□□□□ -0.52
RTN3-214ENST00000545432 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.8□□□□□ -0.52
RTN3-214ENST00000545432 MAPRE2Q15555 327 aa11.8□□□□□ -0.52
RTN3-214ENST00000545432 C8orf82Q6P1X6 216 aaPredicted RBP11.8□□□□□ -0.52
RTN3-214ENST00000545432 ARPINQ7Z6K5 226 aa11.8□□□□□ -0.52
RTN3-214ENST00000545432 TMEM219Q86XT9 240 aa11.8□□□□□ -0.52
RTN3-214ENST00000545432 FAM185AQ8N0U4 392 aa11.8□□□□□ -0.52
RTN3-214ENST00000545432 OR11H6Q8NGC7 330 aa11.8□□□□□ -0.52
RTN3-214ENST00000545432 HPSE2Q8WWQ2 592 aa11.8□□□□□ -0.52
RTN3-214ENST00000545432 FOXRED1Q96CU9 486 aaPredicted RBP11.8□□□□□ -0.52
RTN3-214ENST00000545432 OR5M11Q96RB7 305 aa11.8□□□□□ -0.52
RTN3-214ENST00000545432 PAPOLGQ9BWT3 736 aaKnown RBP11.8□□□□□ -0.52
RTN3-214ENST00000545432 NMNAT2Q9BZQ4 307 aa11.8□□□□□ -0.52
RTN3-214ENST00000545432 CENPMQ9NSP4 180 aa11.8□□□□□ -0.52
RTN3-214ENST00000545432 USE1Q9NZ43 259 aa11.8□□□□□ -0.52
RTN3-214ENST00000545432 FAM32AQ9Y421 112 aaKnown RBP11.8□□□□□ -0.52
RTN3-214ENST00000545432 U3KQK5 164 aa11.8□□□□□ -0.52
RTN3-214ENST00000545432 A0A0G2JND7 137 aa11.79□□□□□ -0.52
RTN3-214ENST00000545432 A0A1W2PPH5 198 aa11.79□□□□□ -0.52
RTN3-214ENST00000545432 A0A1W2PRX2 142 aa11.79□□□□□ -0.52
RTN3-214ENST00000545432 DHRS12A0PJE2 317 aa11.79□□□□□ -0.52
RTN3-214ENST00000545432 TBX1O43435 398 aa11.79□□□□□ -0.52
RTN3-214ENST00000545432 PEX14O75381 377 aa11.79□□□□□ -0.52
RTN3-214ENST00000545432 ZFPL1O95159 310 aa11.79□□□□□ -0.52
RTN3-214ENST00000545432 APOC1P02654 83 aa11.79□□□□□ -0.52
RTN3-214ENST00000545432 PF4P02776 101 aa11.79□□□□□ -0.52
RTN3-214ENST00000545432 GLRA1P23415 457 aa11.79□□□□□ -0.52
RTN3-214ENST00000545432 ACKR3P25106 362 aa11.79□□□□□ -0.52
RTN3-214ENST00000545432 HOXD3P31249 432 aaPredicted RBP11.79□□□□□ -0.52
RTN3-214ENST00000545432 ERVFRD-1P60508 538 aa11.79□□□□□ -0.52
RTN3-214ENST00000545432 GMFBP60983 142 aa11.79□□□□□ -0.52
RTN3-214ENST00000545432 RPL31P62899 125 aaKnown RBP11.79□□□□□ -0.52
RTN3-214ENST00000545432 PRDX4Q13162 271 aa11.79□□□□□ -0.52
RTN3-214ENST00000545432 TIGD6Q17RP2 521 aa11.79□□□□□ -0.52
RTN3-214ENST00000545432 TMEM95Q3KNT9 176 aa11.79□□□□□ -0.52
RTN3-214ENST00000545432 SLC35F1Q5T1Q4 408 aa11.79□□□□□ -0.52
RTN3-214ENST00000545432 ZNF626Q68DY1 528 aa11.79□□□□□ -0.52
RTN3-214ENST00000545432 FTMTQ8N4E7 242 aa11.79□□□□□ -0.52
RTN3-214ENST00000545432 TMEM185AQ8NFB2 350 aa11.79□□□□□ -0.52
RTN3-214ENST00000545432 RNF133Q8WVZ7 376 aa11.79□□□□□ -0.52
RTN3-214ENST00000545432 MYDGFQ969H8 173 aa11.79□□□□□ -0.52
RTN3-214ENST00000545432 NSRP1Q9H0G5 558 aaKnown RBP11.79□□□□□ -0.52
RTN3-214ENST00000545432 OR51I2Q9H344 312 aa11.79□□□□□ -0.52
RTN3-214ENST00000545432 RASL12Q9NYN1 266 aa11.79□□□□□ -0.52
RTN3-214ENST00000545432 HUWE1Q7Z6Z7 4374 aaKnown RBP11.79□□□□□ -0.52
RTN3-214ENST00000545432 hCG_1809904A0A1W2PP81 198 aa11.78□□□□□ -0.52
RTN3-214ENST00000545432 A0A1W2PPE2 198 aa11.78□□□□□ -0.52
RTN3-214ENST00000545432 A0A1W2PR64 198 aa11.78□□□□□ -0.52
RTN3-214ENST00000545432 A0A1W2PRV1 198 aa11.78□□□□□ -0.52
RTN3-214ENST00000545432 TCRBV4S1A1TA0A5B7 111 aa11.78□□□□□ -0.52
RTN3-214ENST00000545432 ZNF593O00488 134 aaPredicted RBP11.78□□□□□ -0.52
RTN3-214ENST00000545432 GABRA2P47869 451 aa11.78□□□□□ -0.52
RTN3-214ENST00000545432 CX3CR1P49238 355 aa11.78□□□□□ -0.52
RTN3-214ENST00000545432 TAF13Q15543 124 aa11.78□□□□□ -0.52
RTN3-214ENST00000545432 NKAPLQ5M9Q1 402 aa11.78□□□□□ -0.52
RTN3-214ENST00000545432 CD177Q8N6Q3 437 aa11.78□□□□□ -0.52
RTN3-214ENST00000545432 ZNF511Q8NB15 262 aa11.78□□□□□ -0.52
RTN3-214ENST00000545432 PROKR2Q8NFJ6 384 aa11.78□□□□□ -0.52
RTN3-214ENST00000545432 ITFG2Q969R8 447 aa11.78□□□□□ -0.52
RTN3-214ENST00000545432 RNF170Q96K19 258 aa11.78□□□□□ -0.52
RTN3-214ENST00000545432 ATP6V1G3Q96LB4 118 aa11.78□□□□□ -0.52
RTN3-214ENST00000545432 ABCB10Q9NRK6 738 aa11.78□□□□□ -0.52
RTN3-214ENST00000545432 LSM4Q9Y4Z0 139 aaKnown RBP11.78□□□□□ -0.52
RTN3-214ENST00000545432 N6AMT1Q9Y5N5 214 aa11.78□□□□□ -0.52
RTN3-214ENST00000545432 ZNF850A8MQ14 1090 aa11.77□□□□□ -0.53
RTN3-214ENST00000545432 NME4O00746 187 aa11.77□□□□□ -0.53
RTN3-214ENST00000545432 RBP4P02753 201 aa11.77□□□□□ -0.53
RTN3-214ENST00000545432 CCL3L1P16619 93 aa11.77□□□□□ -0.53
RTN3-214ENST00000545432 COX7A1P24310 79 aa11.77□□□□□ -0.53
RTN3-214ENST00000545432 AZGP1P25311 298 aaKnown RBP11.77□□□□□ -0.53
RTN3-214ENST00000545432 FMO3P31513 532 aa11.77□□□□□ -0.53
RTN3-214ENST00000545432 ZNF121P58317 390 aaPredicted RBP11.77□□□□□ -0.53
RTN3-214ENST00000545432 SMIM11AP58511 58 aa11.77□□□□□ -0.53
RTN3-214ENST00000545432 TSPAN31Q12999 210 aa11.77□□□□□ -0.53
RTN3-214ENST00000545432 ZNF273Q14593 569 aa11.77□□□□□ -0.53
RTN3-214ENST00000545432 SSX2Q16385 188 aa11.77□□□□□ -0.53
RTN3-214ENST00000545432 LINC01590Q5TEZ4 76 aa11.77□□□□□ -0.53
RTN3-214ENST00000545432 ZNF770Q6IQ21 691 aaPredicted RBP11.77□□□□□ -0.53
RTN3-214ENST00000545432 ETV3LQ6ZN32 361 aa11.77□□□□□ -0.53
RTN3-214ENST00000545432 CCDC121Q6ZUS5 278 aa11.77□□□□□ -0.53
RTN3-214ENST00000545432 FAM57BQ71RH2 274 aa11.77□□□□□ -0.53
RTN3-214ENST00000545432 RNF144BQ7Z419 303 aa11.77□□□□□ -0.53
RTN3-214ENST00000545432 THAP5Q7Z6K1 395 aa11.77□□□□□ -0.53
RTN3-214ENST00000545432 CPLX4Q7Z7G2 160 aa11.77□□□□□ -0.53
RTN3-214ENST00000545432 MRPL41Q8IXM3 137 aaKnown RBP11.77□□□□□ -0.53
RTN3-214ENST00000545432 ZNF561Q8N587 486 aa11.77□□□□□ -0.53
RTN3-214ENST00000545432 OR51L1Q8NGJ5 315 aa11.77□□□□□ -0.53
RTN3-214ENST00000545432 OR52J3Q8NH60 311 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms