RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 ZNF671Q8TAW3 534 aa9.84□□□□□ -0.83
HDAC4-216ENST00000544989 EME1Q96AY2 570 aa9.84□□□□□ -0.83
HDAC4-216ENST00000544989 DACT3Q96B18 629 aaPredicted RBP9.84□□□□□ -0.83
HDAC4-216ENST00000544989 FAM71F1Q96KD3 344 aaPredicted RBP9.84□□□□□ -0.83
HDAC4-216ENST00000544989 RDH12Q96NR8 316 aa9.84□□□□□ -0.83
HDAC4-216ENST00000544989 C19orf24Q9BVV8 132 aa9.84□□□□□ -0.83
HDAC4-216ENST00000544989 ZMAT3Q9HA38 289 aaKnown RBP9.84□□□□□ -0.83
HDAC4-216ENST00000544989 DNAJB11Q9UBS4 358 aa9.84□□□□□ -0.83
HDAC4-216ENST00000544989 MRM2Q9UI43 246 aaKnown RBP9.84□□□□□ -0.83
HDAC4-216ENST00000544989 GMPPBQ9Y5P6 360 aa9.84□□□□□ -0.83
HDAC4-216ENST00000544989 MEGF8Q7Z7M0 2845 aa9.84□□□□□ -0.83
HDAC4-216ENST00000544989 ARHGAP32A7KAX9 2087 aa9.83□□□□□ -0.84
HDAC4-216ENST00000544989 A0A1B0GVI7 797 aa9.83□□□□□ -0.84
HDAC4-216ENST00000544989 NKX6-3A6NJ46 265 aa9.83□□□□□ -0.84
HDAC4-216ENST00000544989 PRR32B1ATL7 298 aa9.83□□□□□ -0.84
HDAC4-216ENST00000544989 TMPRSS2O15393 492 aa9.83□□□□□ -0.84
HDAC4-216ENST00000544989 NRASP01111 189 aa9.83□□□□□ -0.84
HDAC4-216ENST00000544989 GYPAP02724 150 aa9.83□□□□□ -0.84
HDAC4-216ENST00000544989 TTRP02766 147 aa9.83□□□□□ -0.84
HDAC4-216ENST00000544989 GPM6AP51674 278 aa9.83□□□□□ -0.84
HDAC4-216ENST00000544989 CSNK2BP67870 215 aa9.83□□□□□ -0.84
HDAC4-216ENST00000544989 MFGE8Q08431 387 aaPredicted RBP9.83□□□□□ -0.84
HDAC4-216ENST00000544989 ZSCAN26Q16670 478 aa9.83□□□□□ -0.84
HDAC4-216ENST00000544989 ATPAF1Q5TC12 328 aaPredicted RBP9.83□□□□□ -0.84
HDAC4-216ENST00000544989 PLCXD3Q63HM9 321 aa9.83□□□□□ -0.84
HDAC4-216ENST00000544989 LYPD2Q6UXB3 125 aa9.83□□□□□ -0.84
HDAC4-216ENST00000544989 Q6ZSR3 168 aa9.83□□□□□ -0.84
HDAC4-216ENST00000544989 WDR86Q86TI4 376 aa9.83□□□□□ -0.84
HDAC4-216ENST00000544989 ZNF573Q86YE8 665 aa9.83□□□□□ -0.84
HDAC4-216ENST00000544989 SCCPDHQ8NBX0 429 aa9.83□□□□□ -0.84
HDAC4-216ENST00000544989 HPSE2Q8WWQ2 592 aa9.83□□□□□ -0.84
HDAC4-216ENST00000544989 UPRTQ96BW1 309 aa9.83□□□□□ -0.84
HDAC4-216ENST00000544989 C10orf35Q96D05 121 aa9.83□□□□□ -0.84
HDAC4-216ENST00000544989 MED30Q96HR3 178 aa9.83□□□□□ -0.84
HDAC4-216ENST00000544989 ADI1Q9BV57 179 aa9.83□□□□□ -0.84
HDAC4-216ENST00000544989 TTTY10Q9BZA0 68 aa9.83□□□□□ -0.84
HDAC4-216ENST00000544989 PLEKHA1Q9HB21 404 aa9.83□□□□□ -0.84
HDAC4-216ENST00000544989 C8orf4Q9NR00 106 aa9.83□□□□□ -0.84
HDAC4-216ENST00000544989 RASL12Q9NYN1 266 aa9.83□□□□□ -0.84
HDAC4-216ENST00000544989 ZNF732B4DXR9 585 aa9.82□□□□□ -0.84
HDAC4-216ENST00000544989 E9PQ18 207 aa9.82□□□□□ -0.84
HDAC4-216ENST00000544989 RPP14O95059 124 aaKnown RBP9.82□□□□□ -0.84
HDAC4-216ENST00000544989 UBCP0CG48 685 aaKnown RBP9.82□□□□□ -0.84
HDAC4-216ENST00000544989 FAHP16930 419 aa9.82□□□□□ -0.84
HDAC4-216ENST00000544989 CCL1P22362 96 aa9.82□□□□□ -0.84
HDAC4-216ENST00000544989 RBMXP38159 391 aaKnown RBP9.82□□□□□ -0.84
HDAC4-216ENST00000544989 ACTA2P62736 377 aa9.82□□□□□ -0.84
HDAC4-216ENST00000544989 ACTG2P63267 376 aa9.82□□□□□ -0.84
HDAC4-216ENST00000544989 LRRC10Q5BKY1 277 aa9.82□□□□□ -0.84
HDAC4-216ENST00000544989 TMEM42Q69YG0 159 aa9.82□□□□□ -0.84
HDAC4-216ENST00000544989 C9orf139Q6ZV77 190 aa9.82□□□□□ -0.84
HDAC4-216ENST00000544989 MOB3CQ70IA8 216 aa9.82□□□□□ -0.84
HDAC4-216ENST00000544989 CATSPERDQ86XM0 798 aa9.82□□□□□ -0.84
HDAC4-216ENST00000544989 C19orf18Q8NEA5 215 aa9.82□□□□□ -0.84
HDAC4-216ENST00000544989 HAVCR2Q8TDQ0 301 aa9.82□□□□□ -0.84
HDAC4-216ENST00000544989 RPL3LQ92901 407 aaKnown RBP9.82□□□□□ -0.84
HDAC4-216ENST00000544989 TBX5Q99593 518 aa9.82□□□□□ -0.84
HDAC4-216ENST00000544989 MS4A7Q9GZW8 240 aaPredicted RBP9.82□□□□□ -0.84
HDAC4-216ENST00000544989 OR51I2Q9H344 312 aa9.82□□□□□ -0.84
HDAC4-216ENST00000544989 SLC22A13Q9Y226 551 aa9.82□□□□□ -0.84
HDAC4-216ENST00000544989 POLDIP2Q9Y2S7 368 aa9.82□□□□□ -0.84
HDAC4-216ENST00000544989 V9GYS6 101 aa9.82□□□□□ -0.84
HDAC4-216ENST00000544989 DAPL1A0PJW8 107 aa9.81□□□□□ -0.84
HDAC4-216ENST00000544989 ZNF879B4DU55 563 aa9.81□□□□□ -0.84
HDAC4-216ENST00000544989 P2RY10O00398 339 aa9.81□□□□□ -0.84
HDAC4-216ENST00000544989 DVL1O14640 695 aa9.81□□□□□ -0.84
HDAC4-216ENST00000544989 SYT7O43581 403 aa9.81□□□□□ -0.84
HDAC4-216ENST00000544989 NDUFB3O43676 98 aa9.81□□□□□ -0.84
HDAC4-216ENST00000544989 ENTPD6O75354 484 aa9.81□□□□□ -0.84
HDAC4-216ENST00000544989 GATBO75879 557 aaKnown RBP9.81□□□□□ -0.84
HDAC4-216ENST00000544989 BAG2O95816 211 aa9.81□□□□□ -0.84
HDAC4-216ENST00000544989 SERPINA3P01011 423 aa9.81□□□□□ -0.84
HDAC4-216ENST00000544989 EGR1P18146 543 aa9.81□□□□□ -0.84
HDAC4-216ENST00000544989 GLRA1P23415 457 aa9.81□□□□□ -0.84
HDAC4-216ENST00000544989 MRPL28Q13084 256 aaKnown RBP9.81□□□□□ -0.84
HDAC4-216ENST00000544989 ZIK1Q3SY52 487 aaPredicted RBP9.81□□□□□ -0.84
HDAC4-216ENST00000544989 CEP78Q5JTW2 689 aa9.81□□□□□ -0.84
HDAC4-216ENST00000544989 GPR157Q5UAW9 335 aa9.81□□□□□ -0.84
HDAC4-216ENST00000544989 TMEM244Q5VVB8 128 aa9.81□□□□□ -0.84
HDAC4-216ENST00000544989 METTL11BQ5VVY1 283 aa9.81□□□□□ -0.84
HDAC4-216ENST00000544989 STUMQ69YW2 141 aa9.81□□□□□ -0.84
HDAC4-216ENST00000544989 CMTM4Q8IZR5 234 aa9.81□□□□□ -0.84
HDAC4-216ENST00000544989 ACBD7Q8N6N7 88 aa9.81□□□□□ -0.84
HDAC4-216ENST00000544989 ZNF555Q8NEP9 628 aa9.81□□□□□ -0.84
HDAC4-216ENST00000544989 FAM216AQ8WUB2 273 aa9.81□□□□□ -0.84
HDAC4-216ENST00000544989 RNFT2Q96EX2 444 aa9.81□□□□□ -0.84
HDAC4-216ENST00000544989 SLC6A7Q99884 636 aa9.81□□□□□ -0.84
HDAC4-216ENST00000544989 INPP5EQ9NRR6 644 aa9.81□□□□□ -0.84
HDAC4-216ENST00000544989 NLKQ9UBE8 527 aa9.81□□□□□ -0.84
HDAC4-216ENST00000544989 CTSZQ9UBR2 303 aa9.81□□□□□ -0.84
HDAC4-216ENST00000544989 GNG8Q9UK08 70 aa9.81□□□□□ -0.84
HDAC4-216ENST00000544989 SLC7A11Q9UPY5 501 aa9.81□□□□□ -0.84
HDAC4-216ENST00000544989 TGP01266 2768 aa9.8□□□□□ -0.84
HDAC4-216ENST00000544989 IGHV3OR15-7A0A075B7D8 119 aa9.8□□□□□ -0.84
HDAC4-216ENST00000544989 A0A1B0GTI1 187 aa9.8□□□□□ -0.84
HDAC4-216ENST00000544989 LOC100130705A0A1B0GUX0 176 aa9.8□□□□□ -0.84
HDAC4-216ENST00000544989 C22orf46C9J442 243 aa9.8□□□□□ -0.84
HDAC4-216ENST00000544989 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.8□□□□□ -0.84
HDAC4-216ENST00000544989 J3QT63 122 aa9.8□□□□□ -0.84
HDAC4-216ENST00000544989 SLC16A6O15403 523 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms