RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 ARMC8Q8IUR7 673 aa3.24□□□□□ -1.89
SNHG1-220ENST00000544550 KIRREL3Q8IZU9 778 aa3.24□□□□□ -1.89
SNHG1-220ENST00000544550 OSR2Q8N2R0 312 aa3.24□□□□□ -1.89
SNHG1-220ENST00000544550 C10orf111Q8N326 155 aa3.24□□□□□ -1.89
SNHG1-220ENST00000544550 GCSAMQ8N6F7 178 aa3.24□□□□□ -1.89
SNHG1-220ENST00000544550 OR9Q1Q8NGQ5 310 aa3.24□□□□□ -1.89
SNHG1-220ENST00000544550 OR1F12Q8NHA8 337 aa3.24□□□□□ -1.89
SNHG1-220ENST00000544550 AGR3Q8TD06 166 aa3.24□□□□□ -1.89
SNHG1-220ENST00000544550 LRRC8CQ8TDW0 803 aa3.24□□□□□ -1.89
SNHG1-220ENST00000544550 C17orf50Q8WW18 174 aa3.24□□□□□ -1.89
SNHG1-220ENST00000544550 HDAC2Q92769 488 aaKnown RBP3.24□□□□□ -1.89
SNHG1-220ENST00000544550 MALSU1Q96EH3 234 aa3.24□□□□□ -1.89
SNHG1-220ENST00000544550 MED30Q96HR3 178 aa3.24□□□□□ -1.89
SNHG1-220ENST00000544550 FYTTD1Q96QD9 318 aaKnown RBP3.24□□□□□ -1.89
SNHG1-220ENST00000544550 OR52E6Q96RD3 313 aa3.24□□□□□ -1.89
SNHG1-220ENST00000544550 FMO2Q99518 471 aa3.24□□□□□ -1.89
SNHG1-220ENST00000544550 P2RX4Q99571 388 aa3.24□□□□□ -1.89
SNHG1-220ENST00000544550 CCL13Q99616 98 aa3.24□□□□□ -1.89
SNHG1-220ENST00000544550 MCHR1Q99705 422 aa3.24□□□□□ -1.89
SNHG1-220ENST00000544550 TM2D3Q9BRN9 247 aa3.24□□□□□ -1.89
SNHG1-220ENST00000544550 ADAT1Q9BUB4 502 aaKnown RBP3.24□□□□□ -1.89
SNHG1-220ENST00000544550 KLK15Q9H2R5 256 aa3.24□□□□□ -1.89
SNHG1-220ENST00000544550 TXNIPQ9H3M7 391 aa3.24□□□□□ -1.89
SNHG1-220ENST00000544550 TPT1P8Q9HAU6 139 aa3.24□□□□□ -1.89
SNHG1-220ENST00000544550 RNPEPL1Q9HAU8 725 aa3.24□□□□□ -1.89
SNHG1-220ENST00000544550 POLE4Q9NR33 117 aa3.24□□□□□ -1.89
SNHG1-220ENST00000544550 C1orf123Q9NWV4 160 aa3.24□□□□□ -1.89
SNHG1-220ENST00000544550 DUX4Q9UBX2 424 aa3.24□□□□□ -1.89
SNHG1-220ENST00000544550 SLC25A10Q9UBX3 287 aaPredicted RBP3.24□□□□□ -1.89
SNHG1-220ENST00000544550 TBL2Q9Y4P3 447 aaKnown RBP3.24□□□□□ -1.89
SNHG1-220ENST00000544550 LRP12Q9Y561 859 aa3.24□□□□□ -1.89
SNHG1-220ENST00000544550 SIRT4Q9Y6E7 314 aaPredicted RBP3.24□□□□□ -1.89
SNHG1-220ENST00000544550 WNK2Q9Y3S1 2297 aa3.23□□□□□ -1.89
SNHG1-220ENST00000544550 DOCK11Q5JSL3 2073 aa3.23□□□□□ -1.89
SNHG1-220ENST00000544550 IGHV3OR15-7A0A075B7D8 119 aa3.23□□□□□ -1.89
SNHG1-220ENST00000544550 PSMB11A5LHX3 300 aa3.23□□□□□ -1.89
SNHG1-220ENST00000544550 FAM90A8PA6NJQ4 464 aa3.23□□□□□ -1.89
SNHG1-220ENST00000544550 SEC14L6B5MCN3 397 aa3.23□□□□□ -1.89
SNHG1-220ENST00000544550 KPNA4O00629 521 aaPredicted RBP3.23□□□□□ -1.89
SNHG1-220ENST00000544550 ACOT8O14734 319 aa3.23□□□□□ -1.89
SNHG1-220ENST00000544550 AHCYL1O43865 530 aa3.23□□□□□ -1.89
SNHG1-220ENST00000544550 TIPRLO75663 272 aa3.23□□□□□ -1.89
SNHG1-220ENST00000544550 C1QCP02747 245 aa3.23□□□□□ -1.89
SNHG1-220ENST00000544550 IFNA6P05013 189 aa3.23□□□□□ -1.89
SNHG1-220ENST00000544550 IL6P05231 212 aa3.23□□□□□ -1.89
SNHG1-220ENST00000544550 FRMD6-AS1P0C7T7 363 aa3.23□□□□□ -1.89
SNHG1-220ENST00000544550 CA6P23280 308 aa3.23□□□□□ -1.89
SNHG1-220ENST00000544550 GCAP28676 217 aa3.23□□□□□ -1.89
SNHG1-220ENST00000544550 AQP2P41181 271 aa3.23□□□□□ -1.89
SNHG1-220ENST00000544550 CDKN2CP42773 168 aa3.23□□□□□ -1.89
SNHG1-220ENST00000544550 TGM4P49221 684 aa3.23□□□□□ -1.89
SNHG1-220ENST00000544550 LUMP51884 338 aaPredicted RBP3.23□□□□□ -1.89
SNHG1-220ENST00000544550 DLX1P56177 255 aa3.23□□□□□ -1.89
SNHG1-220ENST00000544550 RAB25P57735 213 aa3.23□□□□□ -1.89
SNHG1-220ENST00000544550 RPL27P61353 136 aaKnown RBP3.23□□□□□ -1.89
SNHG1-220ENST00000544550 LSM6P62312 80 aaKnown RBP3.23□□□□□ -1.89
SNHG1-220ENST00000544550 SPIBQ01892 262 aa3.23□□□□□ -1.89
SNHG1-220ENST00000544550 KLF10Q13118 480 aa3.23□□□□□ -1.89
SNHG1-220ENST00000544550 GK2Q14410 553 aaPredicted RBP3.23□□□□□ -1.89
SNHG1-220ENST00000544550 PCLAFQ15004 111 aa3.23□□□□□ -1.89
SNHG1-220ENST00000544550 PCK2Q16822 640 aa3.23□□□□□ -1.89
SNHG1-220ENST00000544550 ALG10Q5BKT4 473 aa3.23□□□□□ -1.89
SNHG1-220ENST00000544550 FAM27D1Q5T7N8 215 aa3.23□□□□□ -1.89
SNHG1-220ENST00000544550 HCP5Q6MZN7 132 aa3.23□□□□□ -1.89
SNHG1-220ENST00000544550 MRPL21Q7Z2W9 205 aaKnown RBP3.23□□□□□ -1.89
SNHG1-220ENST00000544550 OR2W3Q7Z3T1 314 aa3.23□□□□□ -1.89
SNHG1-220ENST00000544550 COMMD1Q8N668 190 aa3.23□□□□□ -1.89
SNHG1-220ENST00000544550 FAM216BQ8N7L0 139 aa3.23□□□□□ -1.89
SNHG1-220ENST00000544550 OR8U1Q8NH10 309 aa3.23□□□□□ -1.89
SNHG1-220ENST00000544550 OR5K1Q8NHB7 308 aa3.23□□□□□ -1.89
SNHG1-220ENST00000544550 TCP10LQ8TDR4 215 aa3.23□□□□□ -1.89
SNHG1-220ENST00000544550 ADAMTS16Q8TE57 1224 aa3.23□□□□□ -1.89
SNHG1-220ENST00000544550 LRRC29Q8WV35 223 aa3.23□□□□□ -1.89
SNHG1-220ENST00000544550 DUS3LQ96G46 650 aaKnown RBP3.23□□□□□ -1.89
SNHG1-220ENST00000544550 COQ7Q99807 217 aa3.23□□□□□ -1.89
SNHG1-220ENST00000544550 ZNF426Q9BUY5 554 aa3.23□□□□□ -1.89
SNHG1-220ENST00000544550 HDHD2Q9H0R4 259 aa3.23□□□□□ -1.89
SNHG1-220ENST00000544550 WDR55Q9H6Y2 383 aaPredicted RBP3.23□□□□□ -1.89
SNHG1-220ENST00000544550 MRPL15Q9P015 296 aaKnown RBP3.23□□□□□ -1.89
SNHG1-220ENST00000544550 A4GNTQ9UNA3 340 aa3.23□□□□□ -1.89
SNHG1-220ENST00000544550 ANGPT4Q9Y264 503 aa3.23□□□□□ -1.89
SNHG1-220ENST00000544550 NDUFAF1Q9Y375 327 aa3.23□□□□□ -1.89
SNHG1-220ENST00000544550 LYVE1Q9Y5Y7 322 aa3.23□□□□□ -1.89
SNHG1-220ENST00000544550 IGLV1-36A0A0B4J1U3 117 aa3.22□□□□□ -1.89
SNHG1-220ENST00000544550 A0A1W2PPM1 405 aa3.22□□□□□ -1.89
SNHG1-220ENST00000544550 TRAPPC13A5PLN9 417 aa3.22□□□□□ -1.89
SNHG1-220ENST00000544550 HTR3EA5X5Y0 456 aa3.22□□□□□ -1.89
SNHG1-220ENST00000544550 CD300LBA8K4G0 201 aa3.22□□□□□ -1.89
SNHG1-220ENST00000544550 NPIPB5A8MRT5 1133 aa3.22□□□□□ -1.89
SNHG1-220ENST00000544550 M0QZK8 103 aa3.22□□□□□ -1.89
SNHG1-220ENST00000544550 CCL24O00175 119 aa3.22□□□□□ -1.89
SNHG1-220ENST00000544550 BHLHE40O14503 412 aa3.22□□□□□ -1.89
SNHG1-220ENST00000544550 SIGLEC5O15389 551 aa3.22□□□□□ -1.89
SNHG1-220ENST00000544550 RHBDL1O75783 438 aa3.22□□□□□ -1.89
SNHG1-220ENST00000544550 LY6G6CO95867 125 aa3.22□□□□□ -1.89
SNHG1-220ENST00000544550 MT-ND1P03886 318 aa3.22□□□□□ -1.89
SNHG1-220ENST00000544550 TSPAN19P0C672 248 aa3.22□□□□□ -1.89
SNHG1-220ENST00000544550 DUX4L4P0CJ87 422 aa3.22□□□□□ -1.89
SNHG1-220ENST00000544550 PGA5P0DJD9 388 aa3.22□□□□□ -1.89
SNHG1-220ENST00000544550 LBPP18428 481 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms