RNA–Protein interactions for RNA: ENST00000544349.5

VPS33A-209, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS33A, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-209ENST00000544349 FJX1Q86VR8 437 aa12.46□□□□□ -0.41
VPS33A-209ENST00000544349 GVQW1Q8N7I0 195 aa12.46□□□□□ -0.41
VPS33A-209ENST00000544349 ANGPTL6Q8NI99 470 aa12.46□□□□□ -0.41
VPS33A-209ENST00000544349 NUDCD2Q8WVJ2 157 aa12.46□□□□□ -0.41
VPS33A-209ENST00000544349 FAM71F1Q96KD3 344 aaPredicted RBP12.46□□□□□ -0.41
VPS33A-209ENST00000544349 TRIB1Q96RU8 372 aa12.46□□□□□ -0.41
VPS33A-209ENST00000544349 SLC6A7Q99884 636 aa12.46□□□□□ -0.41
VPS33A-209ENST00000544349 FXYD6Q9H0Q3 95 aa12.46□□□□□ -0.41
VPS33A-209ENST00000544349 C12orf49Q9H741 205 aa12.46□□□□□ -0.41
VPS33A-209ENST00000544349 GLRX2Q9NS18 164 aa12.46□□□□□ -0.41
VPS33A-209ENST00000544349 ZNF224Q9NZL3 707 aa12.46□□□□□ -0.41
VPS33A-209ENST00000544349 PRSS50Q9UI38 385 aa12.46□□□□□ -0.41
VPS33A-209ENST00000544349 MYO7BQ6PIF6 2116 aa12.46□□□□□ -0.41
VPS33A-209ENST00000544349 MKRN2OSH3BPM6 223 aa12.46□□□□□ -0.42
VPS33A-209ENST00000544349 OR4E1P0C645 316 aa12.46□□□□□ -0.42
VPS33A-209ENST00000544349 VSIG8P0DPA2 414 aa12.46□□□□□ -0.42
VPS33A-209ENST00000544349 NFYAP23511 347 aaPredicted RBP12.46□□□□□ -0.42
VPS33A-209ENST00000544349 SEC61A1P61619 476 aaKnown RBP12.46□□□□□ -0.42
VPS33A-209ENST00000544349 GFOD2Q3B7J2 385 aa12.46□□□□□ -0.42
VPS33A-209ENST00000544349 ZNF260Q3ZCT1 412 aa12.46□□□□□ -0.42
VPS33A-209ENST00000544349 LY6G6FQ5SQ64 297 aa12.46□□□□□ -0.42
VPS33A-209ENST00000544349 OR5D14Q8NGL3 314 aa12.46□□□□□ -0.42
VPS33A-209ENST00000544349 OR14K1Q8NGZ2 314 aa12.46□□□□□ -0.42
VPS33A-209ENST00000544349 MRGPRFQ96AM1 343 aa12.46□□□□□ -0.42
VPS33A-209ENST00000544349 LYZL4Q96KX0 146 aa12.46□□□□□ -0.42
VPS33A-209ENST00000544349 MAB21L2Q9Y586 359 aa12.46□□□□□ -0.42
VPS33A-209ENST00000544349 A0A096LPE4 126 aa12.45□□□□□ -0.42
VPS33A-209ENST00000544349 A0A1W2PPZ6 126 aa12.45□□□□□ -0.42
VPS33A-209ENST00000544349 ZNF736B4DX44 427 aaPredicted RBP12.45□□□□□ -0.42
VPS33A-209ENST00000544349 SS18L1O75177 396 aaPredicted RBP12.45□□□□□ -0.42
VPS33A-209ENST00000544349 CYB5AP00167 134 aa12.45□□□□□ -0.42
VPS33A-209ENST00000544349 ZNF250P15622 560 aa12.45□□□□□ -0.42
VPS33A-209ENST00000544349 ABOP16442 354 aa12.45□□□□□ -0.42
VPS33A-209ENST00000544349 ZNF20P17024 532 aa12.45□□□□□ -0.42
VPS33A-209ENST00000544349 RAB6AP20340 208 aa12.45□□□□□ -0.42
VPS33A-209ENST00000544349 HTR5AP47898 357 aa12.45□□□□□ -0.42
VPS33A-209ENST00000544349 SCGB2B2Q4G0G5 96 aa12.45□□□□□ -0.42
VPS33A-209ENST00000544349 OR52W1Q6IF63 320 aa12.45□□□□□ -0.42
VPS33A-209ENST00000544349 RPUSD3Q6P087 351 aaKnown RBP12.45□□□□□ -0.42
VPS33A-209ENST00000544349 ZNF529Q6P280 563 aa12.45□□□□□ -0.42
VPS33A-209ENST00000544349 TRAPPC6BQ86SZ2 158 aa12.45□□□□□ -0.42
VPS33A-209ENST00000544349 BPIFB2Q8N4F0 458 aa12.45□□□□□ -0.42
VPS33A-209ENST00000544349 OR5M9Q8NGP3 310 aa12.45□□□□□ -0.42
VPS33A-209ENST00000544349 PTX4Q96A99 478 aa12.45□□□□□ -0.42
VPS33A-209ENST00000544349 NICN1Q9BSH3 213 aa12.45□□□□□ -0.42
VPS33A-209ENST00000544349 ZNF230Q9UIE0 474 aaPredicted RBP12.45□□□□□ -0.42
VPS33A-209ENST00000544349 URB1O60287 2271 aaKnown RBP12.45□□□□□ -0.42
VPS33A-209ENST00000544349 MELTFP08582 738 aa12.44□□□□□ -0.42
VPS33A-209ENST00000544349 OR3A2P47893 321 aa12.44□□□□□ -0.42
VPS33A-209ENST00000544349 SORDQ00796 357 aa12.44□□□□□ -0.42
VPS33A-209ENST00000544349 HLXQ14774 488 aaPredicted RBP12.44□□□□□ -0.42
VPS33A-209ENST00000544349 SNAI3Q3KNW1 292 aa12.44□□□□□ -0.42
VPS33A-209ENST00000544349 FBXW9Q5XUX1 488 aa12.44□□□□□ -0.42
VPS33A-209ENST00000544349 ZNF584Q8IVC4 421 aa12.44□□□□□ -0.42
VPS33A-209ENST00000544349 CCDC28AQ8IWP9 274 aa12.44□□□□□ -0.42
VPS33A-209ENST00000544349 OR5AS1Q8N127 324 aa12.44□□□□□ -0.42
VPS33A-209ENST00000544349 OR52H1Q8NGJ2 320 aa12.44□□□□□ -0.42
VPS33A-209ENST00000544349 WBP1Q96G27 269 aa12.44□□□□□ -0.42
VPS33A-209ENST00000544349 LHX6Q9UPM6 363 aa12.44□□□□□ -0.42
VPS33A-209ENST00000544349 VSIG4Q9Y279 399 aa12.44□□□□□ -0.42
VPS33A-209ENST00000544349 LOC100509620A0A075B734 347 aa12.44□□□□□ -0.42
VPS33A-209ENST00000544349 A0A0A6YYD4 124 aa12.44□□□□□ -0.42
VPS33A-209ENST00000544349 A0A0A6YYH2 397 aa12.44□□□□□ -0.42
VPS33A-209ENST00000544349 A6NJ64 397 aa12.44□□□□□ -0.42
VPS33A-209ENST00000544349 H3BUI4 141 aa12.44□□□□□ -0.42
VPS33A-209ENST00000544349 K7ENP7 123 aa12.44□□□□□ -0.42
VPS33A-209ENST00000544349 RAB3AP20336 220 aa12.44□□□□□ -0.42
VPS33A-209ENST00000544349 HGFACQ04756 655 aa12.44□□□□□ -0.42
VPS33A-209ENST00000544349 PLEKHN1Q494U1 663 aaPredicted RBP12.44□□□□□ -0.42
VPS33A-209ENST00000544349 DMRTC1Q5HYR2 192 aa12.44□□□□□ -0.42
VPS33A-209ENST00000544349 PABPC1L2AQ5JQF8 200 aa12.44□□□□□ -0.42
VPS33A-209ENST00000544349 NHLRC3Q5JS37 347 aa12.44□□□□□ -0.42
VPS33A-209ENST00000544349 C11orf88Q6PI97 169 aa12.44□□□□□ -0.42
VPS33A-209ENST00000544349 INO80CQ6PI98 192 aaPredicted RBP12.44□□□□□ -0.42
VPS33A-209ENST00000544349 C3P1Q6ZMU1 363 aa12.44□□□□□ -0.42
VPS33A-209ENST00000544349 Q6ZSR3 168 aa12.44□□□□□ -0.42
VPS33A-209ENST00000544349 TMUB2Q71RG4 321 aa12.44□□□□□ -0.42
VPS33A-209ENST00000544349 CD163Q86VB7 1156 aa12.44□□□□□ -0.42
VPS33A-209ENST00000544349 CDH26Q8IXH8 852 aa12.44□□□□□ -0.42
VPS33A-209ENST00000544349 FOXRED1Q96CU9 486 aaPredicted RBP12.44□□□□□ -0.42
VPS33A-209ENST00000544349 OR10A2Q9H208 303 aa12.44□□□□□ -0.42
VPS33A-209ENST00000544349 DKK4Q9UBT3 224 aa12.44□□□□□ -0.42
VPS33A-209ENST00000544349 V9GYS6 101 aa12.44□□□□□ -0.42
VPS33A-209ENST00000544349 DCHS1Q96JQ0 3298 aa12.44□□□□□ -0.42
VPS33A-209ENST00000544349 TRAV14DV4A0A0A6YYC5 116 aa12.43□□□□□ -0.42
VPS33A-209ENST00000544349 OR14I1A6ND48 311 aa12.43□□□□□ -0.42
VPS33A-209ENST00000544349 AHRRA9YTQ3 701 aa12.43□□□□□ -0.42
VPS33A-209ENST00000544349 I3L521 148 aa12.43□□□□□ -0.42
VPS33A-209ENST00000544349 SCO1O75880 301 aa12.43□□□□□ -0.42
VPS33A-209ENST00000544349 DHRS3O75911 302 aa12.43□□□□□ -0.42
VPS33A-209ENST00000544349 CRYZL1O95825 349 aa12.43□□□□□ -0.42
VPS33A-209ENST00000544349 BPNT1O95861 308 aa12.43□□□□□ -0.42
VPS33A-209ENST00000544349 GNB3P16520 340 aa12.43□□□□□ -0.42
VPS33A-209ENST00000544349 MPGP29372 298 aa12.43□□□□□ -0.42
VPS33A-209ENST00000544349 AANATQ16613 207 aa12.43□□□□□ -0.42
VPS33A-209ENST00000544349 AWAT2Q6E213 333 aa12.43□□□□□ -0.42
VPS33A-209ENST00000544349 PGAP1Q75T13 922 aa12.43□□□□□ -0.42
VPS33A-209ENST00000544349 CHST4Q8NCG5 386 aa12.43□□□□□ -0.42
VPS33A-209ENST00000544349 CPEB3Q8NE35 698 aaKnown RBP12.43□□□□□ -0.42
VPS33A-209ENST00000544349 SGK3Q96BR1 496 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms