RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 THRSPQ92748 146 aa12.98□□□□□ -0.33
DDX55-209ENST00000542286 PIGTQ969N2 578 aa12.98□□□□□ -0.33
DDX55-209ENST00000542286 NECAB3Q96P71 396 aaPredicted RBP12.98□□□□□ -0.33
DDX55-209ENST00000542286 LPAR5Q9H1C0 372 aa12.98□□□□□ -0.33
DDX55-209ENST00000542286 SLC26A1Q9H2B4 701 aa12.98□□□□□ -0.33
DDX55-209ENST00000542286 IGLV3-32A0A0A0MS00 114 aa12.98□□□□□ -0.33
DDX55-209ENST00000542286 RNF222A6NCQ9 220 aa12.98□□□□□ -0.33
DDX55-209ENST00000542286 METTL21EPA6NDL7 271 aa12.98□□□□□ -0.33
DDX55-209ENST00000542286 TTLL8A6PVC2 850 aa12.98□□□□□ -0.33
DDX55-209ENST00000542286 TP53I11O14683 189 aa12.98□□□□□ -0.33
DDX55-209ENST00000542286 CD8AP01732 235 aa12.98□□□□□ -0.33
DDX55-209ENST00000542286 DLSTP36957 453 aa12.98□□□□□ -0.33
DDX55-209ENST00000542286 BATF2Q8N1L9 274 aa12.98□□□□□ -0.33
DDX55-209ENST00000542286 PAQR8Q8TEZ7 354 aa12.98□□□□□ -0.33
DDX55-209ENST00000542286 NAT6Q93015 286 aa12.98□□□□□ -0.33
DDX55-209ENST00000542286 C1orf147Q96MC9 270 aaPredicted RBP12.98□□□□□ -0.33
DDX55-209ENST00000542286 TMEM231Q9H6L2 316 aa12.98□□□□□ -0.33
DDX55-209ENST00000542286 COMMD9Q9P000 198 aa12.98□□□□□ -0.33
DDX55-209ENST00000542286 DKKL1Q9UK85 242 aa12.98□□□□□ -0.33
DDX55-209ENST00000542286 RAB22AQ9UL26 194 aa12.98□□□□□ -0.33
DDX55-209ENST00000542286 NDUFS6O75380 124 aaKnown RBP12.97□□□□□ -0.33
DDX55-209ENST00000542286 ZNF205O95201 554 aa12.97□□□□□ -0.33
DDX55-209ENST00000542286 PMS2P2O95744 297 aa12.97□□□□□ -0.33
DDX55-209ENST00000542286 IGHV3-9P01782 118 aa12.97□□□□□ -0.33
DDX55-209ENST00000542286 CD63P08962 238 aa12.97□□□□□ -0.33
DDX55-209ENST00000542286 CSNK1A1P48729 337 aa12.97□□□□□ -0.33
DDX55-209ENST00000542286 TMEM50BP56557 158 aa12.97□□□□□ -0.33
DDX55-209ENST00000542286 RSPO1Q2MKA7 263 aaPredicted RBP12.97□□□□□ -0.33
DDX55-209ENST00000542286 UNQ6126/PRO20091Q6UXV3 157 aa12.97□□□□□ -0.33
DDX55-209ENST00000542286 RPS19BP1Q86WX3 136 aaKnown RBP12.97□□□□□ -0.33
DDX55-209ENST00000542286 GTPBP8Q8N3Z3 284 aaPredicted RBP12.97□□□□□ -0.33
DDX55-209ENST00000542286 NKAIN3Q8N8D7 197 aa12.97□□□□□ -0.33
DDX55-209ENST00000542286 AGBL5Q8NDL9 886 aa12.97□□□□□ -0.33
DDX55-209ENST00000542286 MARCH1Q8TCQ1 289 aa12.97□□□□□ -0.33
DDX55-209ENST00000542286 ROBO4Q8WZ75 1007 aa12.97□□□□□ -0.33
DDX55-209ENST00000542286 ARHGAP5-AS1Q96IT6 56 aa12.97□□□□□ -0.33
DDX55-209ENST00000542286 CNTNAP3BQ96NU0 1288 aa12.97□□□□□ -0.33
DDX55-209ENST00000542286 ALX4Q9H161 411 aaPredicted RBP12.97□□□□□ -0.33
DDX55-209ENST00000542286 ELL3Q9HB65 397 aaPredicted RBP12.97□□□□□ -0.33
DDX55-209ENST00000542286 TREM1Q9NP99 234 aa12.97□□□□□ -0.33
DDX55-209ENST00000542286 DMXL1Q9Y485 3027 aa12.97□□□□□ -0.33
DDX55-209ENST00000542286 NSG1A0A0A6YYJ2 146 aa12.97□□□□□ -0.33
DDX55-209ENST00000542286 NPIPB13A6NJU9 1138 aa12.97□□□□□ -0.33
DDX55-209ENST00000542286 NPIPB4C9JG80 1138 aa12.97□□□□□ -0.33
DDX55-209ENST00000542286 SDCBPO00560 298 aaPredicted RBP12.97□□□□□ -0.33
DDX55-209ENST00000542286 S100A8P05109 93 aa12.97□□□□□ -0.33
DDX55-209ENST00000542286 CD37P11049 281 aa12.97□□□□□ -0.33
DDX55-209ENST00000542286 Q0VFX4 171 aa12.97□□□□□ -0.33
DDX55-209ENST00000542286 HABP2Q14520 560 aaPredicted RBP12.97□□□□□ -0.33
DDX55-209ENST00000542286 PLEKHN1Q494U1 663 aaPredicted RBP12.97□□□□□ -0.33
DDX55-209ENST00000542286 ACOT7LQ6ZUV0 252 aa12.97□□□□□ -0.33
DDX55-209ENST00000542286 CCDC107Q8WV48 283 aa12.97□□□□□ -0.33
DDX55-209ENST00000542286 PGAM5Q96HS1 289 aa12.97□□□□□ -0.33
DDX55-209ENST00000542286 EP300Q09472 2414 aaPredicted RBP12.97□□□□□ -0.33
DDX55-209ENST00000542286 MED13Q9UHV7 2174 aa12.96□□□□□ -0.33
DDX55-209ENST00000542286 TRBV23-1A0A0A0MS06 115 aa12.96□□□□□ -0.33
DDX55-209ENST00000542286 LIFP15018 202 aa12.96□□□□□ -0.33
DDX55-209ENST00000542286 NPY4RP50391 375 aa12.96□□□□□ -0.33
DDX55-209ENST00000542286 RAB5BP61020 215 aa12.96□□□□□ -0.33
DDX55-209ENST00000542286 OR10R2Q8NGX6 335 aa12.96□□□□□ -0.33
DDX55-209ENST00000542286 MIOXQ9UGB7 285 aa12.96□□□□□ -0.33
DDX55-209ENST00000542286 STK17BO94768 372 aa12.96□□□□□ -0.34
DDX55-209ENST00000542286 HTR3BO95264 441 aa12.96□□□□□ -0.34
DDX55-209ENST00000542286 SLC25A4P12235 298 aa12.96□□□□□ -0.34
DDX55-209ENST00000542286 CD34P28906 385 aa12.96□□□□□ -0.34
DDX55-209ENST00000542286 SSR4P51571 173 aa12.96□□□□□ -0.34
DDX55-209ENST00000542286 ENDOGQ14249 297 aaKnown RBP12.96□□□□□ -0.34
DDX55-209ENST00000542286 HIST3H3Q16695 136 aa12.96□□□□□ -0.34
DDX55-209ENST00000542286 SNAI3Q3KNW1 292 aa12.96□□□□□ -0.34
DDX55-209ENST00000542286 SKA3Q8IX90 412 aa12.96□□□□□ -0.34
DDX55-209ENST00000542286 OR5M8Q8NGP6 311 aa12.96□□□□□ -0.34
DDX55-209ENST00000542286 INTS12Q96CB8 462 aaKnown RBP12.96□□□□□ -0.34
DDX55-209ENST00000542286 ALKBH3Q96Q83 286 aaPredicted RBP12.96□□□□□ -0.34
DDX55-209ENST00000542286 EEF1E1-BLOC1S5C9J1V9 151 aa12.95□□□□□ -0.34
DDX55-209ENST00000542286 NPIPA2E9PIF3 369 aa12.95□□□□□ -0.34
DDX55-209ENST00000542286 NPIPA3F8WFD2 350 aa12.95□□□□□ -0.34
DDX55-209ENST00000542286 STMND1H3BQB6 276 aa12.95□□□□□ -0.34
DDX55-209ENST00000542286 LAMTOR5O43504 91 aa12.95□□□□□ -0.34
DDX55-209ENST00000542286 CD74P04233 296 aa12.95□□□□□ -0.34
DDX55-209ENST00000542286 HEXAP06865 529 aa12.95□□□□□ -0.34
DDX55-209ENST00000542286 ERCC1P07992 297 aaPredicted RBP12.95□□□□□ -0.34
DDX55-209ENST00000542286 SERPINA2P20848 420 aa12.95□□□□□ -0.34
DDX55-209ENST00000542286 CAPZA1P52907 286 aa12.95□□□□□ -0.34
DDX55-209ENST00000542286 ATP1B3P54709 279 aa12.95□□□□□ -0.34
DDX55-209ENST00000542286 SLC35A1P78382 337 aa12.95□□□□□ -0.34
DDX55-209ENST00000542286 ECH1Q13011 328 aa12.95□□□□□ -0.34
DDX55-209ENST00000542286 SMCO1Q147U7 214 aa12.95□□□□□ -0.34
DDX55-209ENST00000542286 UBE2V2Q15819 145 aa12.95□□□□□ -0.34
DDX55-209ENST00000542286 CRIP3Q6Q6R5 217 aa12.95□□□□□ -0.34
DDX55-209ENST00000542286 PPP1R1CQ8WVI7 109 aa12.95□□□□□ -0.34
DDX55-209ENST00000542286 FBXO17Q96EF6 278 aa12.95□□□□□ -0.34
DDX55-209ENST00000542286 ST6GALNAC5Q9BVH7 336 aa12.95□□□□□ -0.34
DDX55-209ENST00000542286 TNRC6BQ9UPQ9 1833 aaKnown RBP12.95□□□□□ -0.34
DDX55-209ENST00000542286 TMEM14DPA8MWL7 114 aa12.95□□□□□ -0.34
DDX55-209ENST00000542286 C9J4A7 227 aa12.95□□□□□ -0.34
DDX55-209ENST00000542286 CDC14BO60729 498 aa12.95□□□□□ -0.34
DDX55-209ENST00000542286 SPINK2P20155 84 aa12.95□□□□□ -0.34
DDX55-209ENST00000542286 CASRP41180 1078 aa12.95□□□□□ -0.34
DDX55-209ENST00000542286 H3F3AP84243 136 aa12.95□□□□□ -0.34
DDX55-209ENST00000542286 ZIC4Q8N9L1 334 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms