RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 UBL7Q96S82 380 aaPredicted RBP14.28□□□□□ -0.12
VARS2-212ENST00000542001 TRAV39A0A0B4J263 110 aa14.27□□□□□ -0.12
VARS2-212ENST00000542001 RPS10-NUDT3A0A1W2PQS6 291 aa14.27□□□□□ -0.12
VARS2-212ENST00000542001 CD300LBA8K4G0 201 aa14.27□□□□□ -0.12
VARS2-212ENST00000542001 C1orf196B1AJZ1 125 aa14.27□□□□□ -0.12
VARS2-212ENST00000542001 GLULP15104 373 aa14.27□□□□□ -0.12
VARS2-212ENST00000542001 RPS10P46783 165 aaKnown RBP14.27□□□□□ -0.12
VARS2-212ENST00000542001 TUSC1Q2TAM9 212 aa14.27□□□□□ -0.12
VARS2-212ENST00000542001 SPINK14Q6IE38 97 aa14.27□□□□□ -0.12
VARS2-212ENST00000542001 Q6ZRG5 221 aa14.27□□□□□ -0.12
VARS2-212ENST00000542001 D2HGDHQ8N465 521 aa14.27□□□□□ -0.12
VARS2-212ENST00000542001 DEFB123Q8N688 67 aa14.27□□□□□ -0.12
VARS2-212ENST00000542001 ZNF709Q8N972 641 aa14.27□□□□□ -0.12
VARS2-212ENST00000542001 IGKV1D-43A0A0B4J1Z2 117 aa14.27□□□□□ -0.12
VARS2-212ENST00000542001 C9orf170A2RU37 121 aa14.27□□□□□ -0.12
VARS2-212ENST00000542001 PCBD1P61457 104 aa14.27□□□□□ -0.12
VARS2-212ENST00000542001 EDDM3AQ14507 147 aa14.27□□□□□ -0.12
VARS2-212ENST00000542001 ELFN2Q5R3F8 820 aa14.27□□□□□ -0.12
VARS2-212ENST00000542001 TMEM182Q6ZP80 229 aaPredicted RBP14.27□□□□□ -0.12
VARS2-212ENST00000542001 GCNT2Q8N0V5 402 aa14.27□□□□□ -0.12
VARS2-212ENST00000542001 ANAPC1Q9H1A4 1944 aa14.27□□□□□ -0.13
VARS2-212ENST00000542001 SNAPC5O75971 98 aa14.27□□□□□ -0.13
VARS2-212ENST00000542001 OR2F2O95006 317 aa14.27□□□□□ -0.13
VARS2-212ENST00000542001 BPNT1O95861 308 aa14.27□□□□□ -0.13
VARS2-212ENST00000542001 HIST1H1DP16402 221 aaKnown RBP14.27□□□□□ -0.13
VARS2-212ENST00000542001 OR2F1Q13607 317 aa14.27□□□□□ -0.13
VARS2-212ENST00000542001 C2orf68Q2NKX9 166 aa14.27□□□□□ -0.13
VARS2-212ENST00000542001 TMEM268Q5VZI3 342 aa14.27□□□□□ -0.13
VARS2-212ENST00000542001 CATSPERDQ86XM0 798 aa14.27□□□□□ -0.13
VARS2-212ENST00000542001 ARGFXA6NJG6 315 aa14.26□□□□□ -0.13
VARS2-212ENST00000542001 RPL12P30050 165 aaKnown RBP14.26□□□□□ -0.13
VARS2-212ENST00000542001 H2BFSP57053 126 aa14.26□□□□□ -0.13
VARS2-212ENST00000542001 RPS11P62280 158 aaKnown RBP eCLIP14.26□□□□□ -0.13
VARS2-212ENST00000542001 CXorf67Q86X51 503 aaPredicted RBP14.26□□□□□ -0.13
VARS2-212ENST00000542001 ZNF501Q96CX3 271 aaPredicted RBP14.26□□□□□ -0.13
VARS2-212ENST00000542001 RNF150Q9ULK6 438 aa14.26□□□□□ -0.13
VARS2-212ENST00000542001 EPHA8P29322 1005 aaPredicted RBP14.26□□□□□ -0.13
VARS2-212ENST00000542001 IL2RGP31785 369 aa14.26□□□□□ -0.13
VARS2-212ENST00000542001 DHRS13Q6UX07 377 aa14.26□□□□□ -0.13
VARS2-212ENST00000542001 CADM4Q8NFZ8 388 aa14.26□□□□□ -0.13
VARS2-212ENST00000542001 FLVCR1-AS1Q8TAF5 88 aa14.26□□□□□ -0.13
VARS2-212ENST00000542001 SCARF2Q96GP6 870 aaPredicted RBP14.26□□□□□ -0.13
VARS2-212ENST00000542001 GPHA2Q96T91 129 aa14.26□□□□□ -0.13
VARS2-212ENST00000542001 CNTNAP3Q9BZ76 1288 aa14.26□□□□□ -0.13
VARS2-212ENST00000542001 NKX6-2Q9C056 277 aaPredicted RBP14.26□□□□□ -0.13
VARS2-212ENST00000542001 EXOSC3Q9NQT5 275 aaKnown RBP14.26□□□□□ -0.13
VARS2-212ENST00000542001 PRDM6Q9NQX0 595 aa14.26□□□□□ -0.13
VARS2-212ENST00000542001 LOXL2Q9Y4K0 774 aa14.26□□□□□ -0.13
VARS2-212ENST00000542001 FANCMQ8IYD8 2048 aa14.26□□□□□ -0.13
VARS2-212ENST00000542001 ZNF587BE7ETH6 402 aa14.26□□□□□ -0.13
VARS2-212ENST00000542001 TTRP02766 147 aa14.26□□□□□ -0.13
VARS2-212ENST00000542001 GABRA2P47869 451 aa14.26□□□□□ -0.13
VARS2-212ENST00000542001 PDZK1IP1Q13113 114 aa14.26□□□□□ -0.13
VARS2-212ENST00000542001 EXT1Q16394 746 aa14.26□□□□□ -0.13
VARS2-212ENST00000542001 CLEC12BQ2HXU8 276 aa14.26□□□□□ -0.13
VARS2-212ENST00000542001 LAMTOR1Q6IAA8 161 aa14.26□□□□□ -0.13
VARS2-212ENST00000542001 ZSCAN4Q8NAM6 433 aaPredicted RBP14.26□□□□□ -0.13
VARS2-212ENST00000542001 C14orf79Q96F83 325 aa14.26□□□□□ -0.13
VARS2-212ENST00000542001 ZNF629Q9UEG4 869 aaPredicted RBP14.26□□□□□ -0.13
VARS2-212ENST00000542001 KLK13Q9UKR3 277 aa14.26□□□□□ -0.13
VARS2-212ENST00000542001 ATG12O94817 140 aa14.26□□□□□ -0.13
VARS2-212ENST00000542001 SNAPINO95295 136 aa14.26□□□□□ -0.13
VARS2-212ENST00000542001 PDGFBP01127 241 aaPredicted RBP14.26□□□□□ -0.13
VARS2-212ENST00000542001 GABRA1P14867 456 aa14.26□□□□□ -0.13
VARS2-212ENST00000542001 ACTBL2Q562R1 376 aa14.26□□□□□ -0.13
VARS2-212ENST00000542001 TMEM128Q5BJH2 165 aa14.26□□□□□ -0.13
VARS2-212ENST00000542001 OR13C8Q8NGS7 320 aa14.26□□□□□ -0.13
VARS2-212ENST00000542001 BCO1Q9HAY6 547 aa14.26□□□□□ -0.13
VARS2-212ENST00000542001 KCNIP1Q9NZI2 227 aa14.26□□□□□ -0.13
VARS2-212ENST00000542001 KCNK7Q9Y2U2 307 aa14.26□□□□□ -0.13
VARS2-212ENST00000542001 HDGFL3Q9Y3E1 203 aa14.26□□□□□ -0.13
VARS2-212ENST00000542001 ZNF814B7Z6K7 855 aa14.25□□□□□ -0.13
VARS2-212ENST00000542001 FTCDNL1E5RQL4 147 aa14.25□□□□□ -0.13
VARS2-212ENST00000542001 GPM6AP51674 278 aa14.25□□□□□ -0.13
VARS2-212ENST00000542001 OR2B8PP59922 312 aa14.25□□□□□ -0.13
VARS2-212ENST00000542001 HAGHQ16775 308 aa14.25□□□□□ -0.13
VARS2-212ENST00000542001 PAN3Q58A45 887 aaKnown RBP14.25□□□□□ -0.13
VARS2-212ENST00000542001 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.25□□□□□ -0.13
VARS2-212ENST00000542001 OR8G2PQ6IF36 304 aa14.25□□□□□ -0.13
VARS2-212ENST00000542001 ZNF808Q8N4W9 903 aaPredicted RBP14.25□□□□□ -0.13
VARS2-212ENST00000542001 SFT2D1Q8WV19 159 aa14.25□□□□□ -0.13
VARS2-212ENST00000542001 BIN3Q9NQY0 253 aa14.25□□□□□ -0.13
VARS2-212ENST00000542001 PURGQ9UJV8 347 aaKnown RBP14.25□□□□□ -0.13
VARS2-212ENST00000542001 HELZP42694 1942 aaKnown RBP14.25□□□□□ -0.13
VARS2-212ENST00000542001 DOCK10Q96BY6 2186 aa14.25□□□□□ -0.13
VARS2-212ENST00000542001 SIRPB1O00241 398 aa14.25□□□□□ -0.13
VARS2-212ENST00000542001 GSTZ1O43708 216 aaPredicted RBP14.25□□□□□ -0.13
VARS2-212ENST00000542001 NXPH2O95156 264 aa14.25□□□□□ -0.13
VARS2-212ENST00000542001 RAG2P55895 527 aa14.25□□□□□ -0.13
VARS2-212ENST00000542001 BPIFCQ8NFQ6 507 aa14.25□□□□□ -0.13
VARS2-212ENST00000542001 ADIPOR1Q96A54 375 aa14.25□□□□□ -0.13
VARS2-212ENST00000542001 PBDC1Q9BVG4 233 aa14.25□□□□□ -0.13
VARS2-212ENST00000542001 NMNAT2Q9BZQ4 307 aa14.25□□□□□ -0.13
VARS2-212ENST00000542001 DNAJB11Q9UBS4 358 aa14.25□□□□□ -0.13
VARS2-212ENST00000542001 PPP1R3CQ9UQK1 317 aa14.25□□□□□ -0.13
VARS2-212ENST00000542001 THSD7BQ9C0I4 1608 aa14.25□□□□□ -0.13
VARS2-212ENST00000542001 A0A1W2PPC1 479 aa14.25□□□□□ -0.13
VARS2-212ENST00000542001 GPR31O00270 319 aa14.25□□□□□ -0.13
VARS2-212ENST00000542001 FIP1L1Q6UN15 594 aaKnown RBP14.25□□□□□ -0.13
VARS2-212ENST00000542001 PRSS42Q7Z5A4 293 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms