RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 NEGR1Q7Z3B1 354 aa4.62□□□□□ -1.67
SNHG1-218ENST00000541615 RTN4RL1Q86UN2 441 aaPredicted RBP4.62□□□□□ -1.67
SNHG1-218ENST00000541615 C17orf64Q86WR6 236 aa4.62□□□□□ -1.67
SNHG1-218ENST00000541615 UEVLDQ8IX04 471 aa4.62□□□□□ -1.67
SNHG1-218ENST00000541615 BOD1L2Q8IYS8 172 aa4.62□□□□□ -1.67
SNHG1-218ENST00000541615 OR8I2Q8N0Y5 310 aa4.62□□□□□ -1.67
SNHG1-218ENST00000541615 PTGR2Q8N8N7 351 aaPredicted RBP4.62□□□□□ -1.67
SNHG1-218ENST00000541615 OR2Z1Q8NG97 314 aa4.62□□□□□ -1.67
SNHG1-218ENST00000541615 OR4K1Q8NGD4 311 aa4.62□□□□□ -1.67
SNHG1-218ENST00000541615 OR52R1Q8NGF1 315 aa4.62□□□□□ -1.67
SNHG1-218ENST00000541615 OR52E1Q8NGJ3 308 aa4.62□□□□□ -1.67
SNHG1-218ENST00000541615 OR52I2Q8NH67 350 aa4.62□□□□□ -1.67
SNHG1-218ENST00000541615 ZNF418Q8TF45 676 aaPredicted RBP4.62□□□□□ -1.67
SNHG1-218ENST00000541615 RAB8BQ92930 207 aa4.62□□□□□ -1.67
SNHG1-218ENST00000541615 RERGQ96A58 199 aaPredicted RBP4.62□□□□□ -1.67
SNHG1-218ENST00000541615 PTX4Q96A99 478 aa4.62□□□□□ -1.67
SNHG1-218ENST00000541615 GALMQ96C23 342 aa4.62□□□□□ -1.67
SNHG1-218ENST00000541615 DDIT4LQ96D03 193 aa4.62□□□□□ -1.67
SNHG1-218ENST00000541615 ZMYND19Q96E35 227 aaPredicted RBP4.62□□□□□ -1.67
SNHG1-218ENST00000541615 RBMXL1Q96E39 390 aaKnown RBP4.62□□□□□ -1.67
SNHG1-218ENST00000541615 GPR82Q96P67 336 aa4.62□□□□□ -1.67
SNHG1-218ENST00000541615 AP1S3Q96PC3 154 aa4.62□□□□□ -1.67
SNHG1-218ENST00000541615 NKX3-1Q99801 234 aaPredicted RBP4.62□□□□□ -1.67
SNHG1-218ENST00000541615 ABHD6Q9BV23 337 aa4.62□□□□□ -1.67
SNHG1-218ENST00000541615 MAGEH1Q9H213 219 aa4.62□□□□□ -1.67
SNHG1-218ENST00000541615 FZD8Q9H461 694 aa4.62□□□□□ -1.67
SNHG1-218ENST00000541615 TUBB1Q9H4B7 451 aa4.62□□□□□ -1.67
SNHG1-218ENST00000541615 ALG9Q9H6U8 611 aa4.62□□□□□ -1.67
SNHG1-218ENST00000541615 RDH14Q9HBH5 336 aa4.62□□□□□ -1.67
SNHG1-218ENST00000541615 CYTL1Q9NRR1 136 aa4.62□□□□□ -1.67
SNHG1-218ENST00000541615 TM7SF3Q9NS93 570 aa4.62□□□□□ -1.67
SNHG1-218ENST00000541615 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.62□□□□□ -1.67
SNHG1-218ENST00000541615 LRIT1Q9P2V4 623 aa4.62□□□□□ -1.67
SNHG1-218ENST00000541615 SLC23A2Q9UGH3 650 aa4.62□□□□□ -1.67
SNHG1-218ENST00000541615 MRM2Q9UI43 246 aaKnown RBP4.62□□□□□ -1.67
SNHG1-218ENST00000541615 AHDC1Q5TGY3 1603 aaPredicted RBP4.61□□□□□ -1.67
SNHG1-218ENST00000541615 ZNF646O15015 1829 aaPredicted RBP4.61□□□□□ -1.67
SNHG1-218ENST00000541615 DOCK1Q14185 1865 aa4.61□□□□□ -1.67
SNHG1-218ENST00000541615 DNAJC25-GNG10A0A024R161 153 aa4.61□□□□□ -1.67
SNHG1-218ENST00000541615 IGHV2-26A0A0B4J1V2 119 aa4.61□□□□□ -1.67
SNHG1-218ENST00000541615 A0A1B0GU03 582 aa4.61□□□□□ -1.67
SNHG1-218ENST00000541615 A0A1W2PR80 420 aa4.61□□□□□ -1.67
SNHG1-218ENST00000541615 IGLC7A0M8Q6 106 aa4.61□□□□□ -1.67
SNHG1-218ENST00000541615 GAGE10A6NGK3 116 aa4.61□□□□□ -1.67
SNHG1-218ENST00000541615 IGLON5A6NGN9 336 aa4.61□□□□□ -1.67
SNHG1-218ENST00000541615 ZNF891A8MT65 544 aaPredicted RBP4.61□□□□□ -1.67
SNHG1-218ENST00000541615 HEPACAM2A8MVW5 462 aa4.61□□□□□ -1.67
SNHG1-218ENST00000541615 E5RGE8 158 aa4.61□□□□□ -1.67
SNHG1-218ENST00000541615 ADAM20O43506 726 aa4.61□□□□□ -1.67
SNHG1-218ENST00000541615 LRP3O75074 770 aa4.61□□□□□ -1.67
SNHG1-218ENST00000541615 SAP30O75446 220 aa4.61□□□□□ -1.67
SNHG1-218ENST00000541615 CD160O95971 181 aa4.61□□□□□ -1.67
SNHG1-218ENST00000541615 MT-CO1P00395 513 aa4.61□□□□□ -1.67
SNHG1-218ENST00000541615 H1F0P07305 194 aaKnown RBP4.61□□□□□ -1.67
SNHG1-218ENST00000541615 CTSDP07339 412 aaPredicted RBP4.61□□□□□ -1.67
SNHG1-218ENST00000541615 FURINP09958 794 aa4.61□□□□□ -1.67
SNHG1-218ENST00000541615 ZNF286BP0CG31 522 aa4.61□□□□□ -1.67
SNHG1-218ENST00000541615 AREGP15514 252 aa4.61□□□□□ -1.67
SNHG1-218ENST00000541615 VEGFAP15692 232 aaPredicted RBP4.61□□□□□ -1.67
SNHG1-218ENST00000541615 GOT1P17174 413 aa4.61□□□□□ -1.67
SNHG1-218ENST00000541615 TCN2P20062 427 aa4.61□□□□□ -1.67
SNHG1-218ENST00000541615 HTR1FP30939 366 aa4.61□□□□□ -1.67
SNHG1-218ENST00000541615 SRP14P37108 136 aaKnown RBP4.61□□□□□ -1.67
SNHG1-218ENST00000541615 SOX2P48431 317 aa4.61□□□□□ -1.67
SNHG1-218ENST00000541615 PTH2RP49190 550 aa4.61□□□□□ -1.67
SNHG1-218ENST00000541615 CNN1P51911 297 aaKnown RBP4.61□□□□□ -1.67
SNHG1-218ENST00000541615 MANFP55145 182 aaKnown RBP4.61□□□□□ -1.67
SNHG1-218ENST00000541615 SNU13P55769 128 aaKnown RBP4.61□□□□□ -1.67
SNHG1-218ENST00000541615 SUMO3P55854 103 aaPredicted RBP4.61□□□□□ -1.67
SNHG1-218ENST00000541615 CLDN15P56746 228 aa4.61□□□□□ -1.67
SNHG1-218ENST00000541615 RPL32P62910 135 aaKnown RBP4.61□□□□□ -1.67
SNHG1-218ENST00000541615 CDC42EP1Q00587 391 aa4.61□□□□□ -1.67
SNHG1-218ENST00000541615 ID2Q02363 134 aa4.61□□□□□ -1.67
SNHG1-218ENST00000541615 EGR4Q05215 589 aa4.61□□□□□ -1.67
SNHG1-218ENST00000541615 HSD52Q0P140 79 aa4.61□□□□□ -1.67
SNHG1-218ENST00000541615 OLIG2Q13516 323 aa4.61□□□□□ -1.67
SNHG1-218ENST00000541615 TMEM177Q53S58 311 aa4.61□□□□□ -1.67
SNHG1-218ENST00000541615 LY6G6FQ5SQ64 297 aa4.61□□□□□ -1.67
SNHG1-218ENST00000541615 AADACL3Q5VUY0 350 aa4.61□□□□□ -1.67
SNHG1-218ENST00000541615 SUSD4Q5VX71 490 aa4.61□□□□□ -1.67
SNHG1-218ENST00000541615 FAM180AQ6UWF9 173 aa4.61□□□□□ -1.67
SNHG1-218ENST00000541615 DPPA3Q6W0C5 159 aa4.61□□□□□ -1.67
SNHG1-218ENST00000541615 ZNF66Q6ZN08 573 aa4.61□□□□□ -1.67
SNHG1-218ENST00000541615 ZNF429Q86V71 674 aa4.61□□□□□ -1.67
SNHG1-218ENST00000541615 KLHDC8AQ8IYD2 350 aa4.61□□□□□ -1.67
SNHG1-218ENST00000541615 C1orf174Q8IYL3 243 aa4.61□□□□□ -1.67
SNHG1-218ENST00000541615 ZNF101Q8IZC7 436 aa4.61□□□□□ -1.67
SNHG1-218ENST00000541615 NXPE1Q8N323 547 aa4.61□□□□□ -1.67
SNHG1-218ENST00000541615 Q8N3U1 123 aa4.61□□□□□ -1.67
SNHG1-218ENST00000541615 PAQR4Q8N4S7 273 aaPredicted RBP4.61□□□□□ -1.67
SNHG1-218ENST00000541615 ARHGEF39Q8N4T4 335 aa4.61□□□□□ -1.67
SNHG1-218ENST00000541615 CSNK1A1LQ8N752 337 aa4.61□□□□□ -1.67
SNHG1-218ENST00000541615 TMEM217Q8N7C4 229 aa4.61□□□□□ -1.67
SNHG1-218ENST00000541615 ZNF615Q8N8J6 731 aa4.61□□□□□ -1.67
SNHG1-218ENST00000541615 ZDHHC22Q8N966 263 aa4.61□□□□□ -1.67
SNHG1-218ENST00000541615 C5orf17Q8NAS9 161 aa4.61□□□□□ -1.67
SNHG1-218ENST00000541615 NPEPL1Q8NDH3 523 aa4.61□□□□□ -1.67
SNHG1-218ENST00000541615 OR4D11Q8NGI4 311 aa4.61□□□□□ -1.67
SNHG1-218ENST00000541615 OR51T1Q8NGJ9 327 aa4.61□□□□□ -1.67
SNHG1-218ENST00000541615 OR1N2Q8NGR9 330 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms