RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 KRTAP10-9P60411 292 aa7.94□□□□□ -1.14
DDX55-208ENST00000541259 MXD1Q05195 221 aa7.94□□□□□ -1.14
DDX55-208ENST00000541259 HNRNPA0Q13151 305 aaKnown RBP7.94□□□□□ -1.14
DDX55-208ENST00000541259 SPCS2Q15005 226 aa7.94□□□□□ -1.14
DDX55-208ENST00000541259 OR8G1Q15617 311 aa7.94□□□□□ -1.14
DDX55-208ENST00000541259 TIMM50Q3ZCQ8 353 aa7.94□□□□□ -1.14
DDX55-208ENST00000541259 LCE2AQ5TA79 106 aaPredicted RBP7.94□□□□□ -1.14
DDX55-208ENST00000541259 PLCXD3Q63HM9 321 aa7.94□□□□□ -1.14
DDX55-208ENST00000541259 C11orf71Q6IPW1 123 aa7.94□□□□□ -1.14
DDX55-208ENST00000541259 CRIP3Q6Q6R5 217 aa7.94□□□□□ -1.14
DDX55-208ENST00000541259 PAMR1Q6UXH9 720 aa7.94□□□□□ -1.14
DDX55-208ENST00000541259 GDPGP1Q6ZNW5 385 aa7.94□□□□□ -1.14
DDX55-208ENST00000541259 UTS2BQ765I0 119 aa7.94□□□□□ -1.14
DDX55-208ENST00000541259 TMEM200AQ86VY9 491 aa7.94□□□□□ -1.14
DDX55-208ENST00000541259 ZDHHC23Q8IYP9 409 aa7.94□□□□□ -1.14
DDX55-208ENST00000541259 ZNF611Q8N823 705 aa7.94□□□□□ -1.14
DDX55-208ENST00000541259 DNAAF1Q8NEP3 725 aa7.94□□□□□ -1.14
DDX55-208ENST00000541259 OR2Z1Q8NG97 314 aa7.94□□□□□ -1.14
DDX55-208ENST00000541259 OR10AD1Q8NGE0 317 aa7.94□□□□□ -1.14
DDX55-208ENST00000541259 OR13G1Q8NGZ3 307 aa7.94□□□□□ -1.14
DDX55-208ENST00000541259 NDNFQ8TB73 568 aa7.94□□□□□ -1.14
DDX55-208ENST00000541259 PP6455Q8WZ26 134 aa7.94□□□□□ -1.14
DDX55-208ENST00000541259 OR5P3Q8WZ94 311 aa7.94□□□□□ -1.14
DDX55-208ENST00000541259 PHYHIPQ92561 330 aa7.94□□□□□ -1.14
DDX55-208ENST00000541259 C12orf43Q96C57 262 aaKnown RBP7.94□□□□□ -1.14
DDX55-208ENST00000541259 ISOC1Q96CN7 298 aa7.94□□□□□ -1.14
DDX55-208ENST00000541259 C10orf35Q96D05 121 aa7.94□□□□□ -1.14
DDX55-208ENST00000541259 KCTD7Q96MP8 289 aa7.94□□□□□ -1.14
DDX55-208ENST00000541259 SPACA5Q96QH8 159 aa7.94□□□□□ -1.14
DDX55-208ENST00000541259 TCF7L1Q9HCS4 588 aa7.94□□□□□ -1.14
DDX55-208ENST00000541259 FOXJ3Q9UPW0 622 aa7.94□□□□□ -1.14
DDX55-208ENST00000541259 LAMP3Q9UQV4 416 aa7.94□□□□□ -1.14
DDX55-208ENST00000541259 GSTK1Q9Y2Q3 226 aa7.94□□□□□ -1.14
DDX55-208ENST00000541259 AK6Q9Y3D8 172 aaKnown RBP7.94□□□□□ -1.14
DDX55-208ENST00000541259 MPC1Q9Y5U8 109 aa7.94□□□□□ -1.14
DDX55-208ENST00000541259 TACC2O95359 2948 aa7.94□□□□□ -1.14
DDX55-208ENST00000541259 FBN2P35556 2912 aa7.93□□□□□ -1.14
DDX55-208ENST00000541259 ARID1AO14497 2285 aa7.93□□□□□ -1.14
DDX55-208ENST00000541259 IGKV1-27A0A075B6S5 117 aa7.93□□□□□ -1.14
DDX55-208ENST00000541259 TRAV1-2A0A0B4J238 106 aa7.93□□□□□ -1.14
DDX55-208ENST00000541259 LOC100289279A0A1B0GTE1 492 aa7.93□□□□□ -1.14
DDX55-208ENST00000541259 A0A1B0GWJ7 208 aa7.93□□□□□ -1.14
DDX55-208ENST00000541259 FAM230AA0A1W2PPH8 454 aa7.93□□□□□ -1.14
DDX55-208ENST00000541259 PLSCR5A0PG75 271 aa7.93□□□□□ -1.14
DDX55-208ENST00000541259 ZNF732B4DXR9 585 aa7.93□□□□□ -1.14
DDX55-208ENST00000541259 H3BMQ9 156 aa7.93□□□□□ -1.14
DDX55-208ENST00000541259 ARL6IP5O75915 188 aa7.93□□□□□ -1.14
DDX55-208ENST00000541259 IGHV1-46P01743 117 aa7.93□□□□□ -1.14
DDX55-208ENST00000541259 RAB3AP20336 220 aa7.93□□□□□ -1.14
DDX55-208ENST00000541259 AZGP1P25311 298 aaKnown RBP7.93□□□□□ -1.14
DDX55-208ENST00000541259 BDKRB2P30411 391 aa7.93□□□□□ -1.14
DDX55-208ENST00000541259 RPS19P39019 145 aaKnown RBP7.93□□□□□ -1.14
DDX55-208ENST00000541259 MTNR1BP49286 362 aa7.93□□□□□ -1.14
DDX55-208ENST00000541259 ZNF81P51508 661 aa7.93□□□□□ -1.14
DDX55-208ENST00000541259 CAV3P56539 151 aa7.93□□□□□ -1.14
DDX55-208ENST00000541259 CEACAM21Q3KPI0 293 aa7.93□□□□□ -1.14
DDX55-208ENST00000541259 WDR86Q86TI4 376 aa7.93□□□□□ -1.14
DDX55-208ENST00000541259 NR2C2APQ86WQ0 139 aa7.93□□□□□ -1.14
DDX55-208ENST00000541259 OR52N4Q8NGI2 321 aa7.93□□□□□ -1.14
DDX55-208ENST00000541259 RAB2BQ8WUD1 216 aa7.93□□□□□ -1.14
DDX55-208ENST00000541259 NRGNQ92686 78 aa7.93□□□□□ -1.14
DDX55-208ENST00000541259 THRSPQ92748 146 aa7.93□□□□□ -1.14
DDX55-208ENST00000541259 ITFG2Q969R8 447 aa7.93□□□□□ -1.14
DDX55-208ENST00000541259 RFT1Q96AA3 541 aa7.93□□□□□ -1.14
DDX55-208ENST00000541259 RNF170Q96K19 258 aa7.93□□□□□ -1.14
DDX55-208ENST00000541259 ADAT1Q9BUB4 502 aaKnown RBP7.93□□□□□ -1.14
DDX55-208ENST00000541259 TRAF4Q9BUZ4 470 aaPredicted RBP7.93□□□□□ -1.14
DDX55-208ENST00000541259 TPK1Q9H3S4 243 aa7.93□□□□□ -1.14
DDX55-208ENST00000541259 LIME1Q9H400 295 aa7.93□□□□□ -1.14
DDX55-208ENST00000541259 CBLN4Q9NTU7 201 aa7.93□□□□□ -1.14
DDX55-208ENST00000541259 CKLFQ9UBR5 152 aa7.93□□□□□ -1.14
DDX55-208ENST00000541259 CGGBP1Q9UFW8 167 aaPredicted RBP7.93□□□□□ -1.14
DDX55-208ENST00000541259 ABCA12Q86UK0 2595 aa7.93□□□□□ -1.14
DDX55-208ENST00000541259 HECTD1Q9ULT8 2610 aa7.92□□□□□ -1.14
DDX55-208ENST00000541259 A0A0G2JK05 382 aa7.92□□□□□ -1.14
DDX55-208ENST00000541259 SMIM31A0A1B0GVY4 71 aa7.92□□□□□ -1.14
DDX55-208ENST00000541259 PQLC2LA1A4F0 135 aa7.92□□□□□ -1.14
DDX55-208ENST00000541259 C17orf100A8MU93 164 aa7.92□□□□□ -1.14
DDX55-208ENST00000541259 M0R233 179 aa7.92□□□□□ -1.14
DDX55-208ENST00000541259 ALX3O95076 343 aa7.92□□□□□ -1.14
DDX55-208ENST00000541259 HCKP08631 526 aa7.92□□□□□ -1.14
DDX55-208ENST00000541259 PRF1P14222 555 aa7.92□□□□□ -1.14
DDX55-208ENST00000541259 MYL9P24844 172 aa7.92□□□□□ -1.14
DDX55-208ENST00000541259 SERPINB10P48595 397 aa7.92□□□□□ -1.14
DDX55-208ENST00000541259 GPM6AP51674 278 aa7.92□□□□□ -1.14
DDX55-208ENST00000541259 FUT6P51993 359 aa7.92□□□□□ -1.14
DDX55-208ENST00000541259 OR10A3P58181 314 aa7.92□□□□□ -1.14
DDX55-208ENST00000541259 PPP3R1P63098 170 aa7.92□□□□□ -1.14
DDX55-208ENST00000541259 MAB21L1Q13394 359 aa7.92□□□□□ -1.14
DDX55-208ENST00000541259 MOGQ16653 247 aa7.92□□□□□ -1.14
DDX55-208ENST00000541259 DDI2Q5TDH0 399 aa7.92□□□□□ -1.14
DDX55-208ENST00000541259 AGAP6Q5VW22 663 aa7.92□□□□□ -1.14
DDX55-208ENST00000541259 PRAMEF6Q5VXH4 476 aa7.92□□□□□ -1.14
DDX55-208ENST00000541259 C1orf229Q6ZS94 237 aaPredicted RBP7.92□□□□□ -1.14
DDX55-208ENST00000541259 DTX2Q86UW9 622 aa7.92□□□□□ -1.14
DDX55-208ENST00000541259 ANGPTL5Q86XS5 388 aa7.92□□□□□ -1.14
DDX55-208ENST00000541259 LYPD6Q86Y78 171 aa7.92□□□□□ -1.14
DDX55-208ENST00000541259 FTMTQ8N4E7 242 aa7.92□□□□□ -1.14
DDX55-208ENST00000541259 OR5A2Q8NGI9 324 aa7.92□□□□□ -1.14
DDX55-208ENST00000541259 OR8S1Q8NH09 359 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms