RNA–Protein interactions for RNA: ENST00000540725.5

SNHG1-213, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,374 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-213ENST00000540725 TNFRSF14Q92956 283 aa11.58□□□□□ -0.56
SNHG1-213ENST00000540725 MED30Q96HR3 178 aa11.58□□□□□ -0.56
SNHG1-213ENST00000540725 RNF170Q96K19 258 aa11.58□□□□□ -0.56
SNHG1-213ENST00000540725 LYZL4Q96KX0 146 aa11.58□□□□□ -0.56
SNHG1-213ENST00000540725 C16orf95Q9H693 158 aa11.58□□□□□ -0.56
SNHG1-213ENST00000540725 SLC25A10Q9UBX3 287 aaPredicted RBP11.58□□□□□ -0.56
SNHG1-213ENST00000540725 ARRDC5A6NEK1 342 aa11.57□□□□□ -0.56
SNHG1-213ENST00000540725 SLC22A31A6NKX4 558 aa11.57□□□□□ -0.56
SNHG1-213ENST00000540725 SIGLEC5O15389 551 aa11.57□□□□□ -0.56
SNHG1-213ENST00000540725 PAHP00439 452 aa11.57□□□□□ -0.56
SNHG1-213ENST00000540725 RAP2AP10114 183 aa11.57□□□□□ -0.56
SNHG1-213ENST00000540725 POU1F1P28069 291 aa11.57□□□□□ -0.56
SNHG1-213ENST00000540725 DCTDP32321 178 aa11.57□□□□□ -0.56
SNHG1-213ENST00000540725 SAA4P35542 130 aa11.57□□□□□ -0.56
SNHG1-213ENST00000540725 PSMA6P60900 246 aaKnown RBP11.57□□□□□ -0.56
SNHG1-213ENST00000540725 FAM76BQ5HYJ3 339 aa11.57□□□□□ -0.56
SNHG1-213ENST00000540725 PLBD1Q6P4A8 553 aa11.57□□□□□ -0.56
SNHG1-213ENST00000540725 C1orf122Q6ZSJ8 110 aa11.57□□□□□ -0.56
SNHG1-213ENST00000540725 ZDHHC23Q8IYP9 409 aa11.57□□□□□ -0.56
SNHG1-213ENST00000540725 PNKDQ8N490 385 aa11.57□□□□□ -0.56
SNHG1-213ENST00000540725 OR8B12Q8NGG6 310 aa11.57□□□□□ -0.56
SNHG1-213ENST00000540725 NSL1Q96IY1 281 aa11.57□□□□□ -0.56
SNHG1-213ENST00000540725 TAS2R1Q9NYW7 299 aa11.57□□□□□ -0.56
SNHG1-213ENST00000540725 KLHDC2Q9Y2U9 406 aa11.57□□□□□ -0.56
SNHG1-213ENST00000540725 A0A1W2PQ09 198 aa11.56□□□□□ -0.56
SNHG1-213ENST00000540725 MEIOCA2RUB1 952 aa11.56□□□□□ -0.56
SNHG1-213ENST00000540725 M0R1W7 72 aa11.56□□□□□ -0.56
SNHG1-213ENST00000540725 PRODHO43272 600 aa11.56□□□□□ -0.56
SNHG1-213ENST00000540725 TSPAN9O75954 239 aa11.56□□□□□ -0.56
SNHG1-213ENST00000540725 TSPAN15O95858 294 aa11.56□□□□□ -0.56
SNHG1-213ENST00000540725 CST1P01037 141 aa11.56□□□□□ -0.56
SNHG1-213ENST00000540725 ACAA1P09110 424 aaPredicted RBP11.56□□□□□ -0.56
SNHG1-213ENST00000540725 NDUFB7P17568 137 aa11.56□□□□□ -0.56
SNHG1-213ENST00000540725 TGFBR2P37173 567 aa11.56□□□□□ -0.56
SNHG1-213ENST00000540725 GPM6AP51674 278 aa11.56□□□□□ -0.56
SNHG1-213ENST00000540725 UBE2E1P51965 193 aa11.56□□□□□ -0.56
SNHG1-213ENST00000540725 CAV3P56539 151 aa11.56□□□□□ -0.56
SNHG1-213ENST00000540725 GINS1Q14691 196 aa11.56□□□□□ -0.56
SNHG1-213ENST00000540725 NCR3LG1Q68D85 454 aa11.56□□□□□ -0.56
SNHG1-213ENST00000540725 OR5R1Q8NH85 324 aa11.56□□□□□ -0.56
SNHG1-213ENST00000540725 FAM81AQ8TBF8 368 aa11.56□□□□□ -0.56
SNHG1-213ENST00000540725 CCDC124Q96CT7 223 aaKnown RBP11.56□□□□□ -0.56
SNHG1-213ENST00000540725 LRGUKQ96M69 825 aa11.56□□□□□ -0.56
SNHG1-213ENST00000540725 HIST1H2AAQ96QV6 131 aa11.56□□□□□ -0.56
SNHG1-213ENST00000540725 METTL8Q9H825 291 aaKnown RBP11.56□□□□□ -0.56
SNHG1-213ENST00000540725 NIPAL2Q9H841 368 aa11.56□□□□□ -0.56
SNHG1-213ENST00000540725 NLKQ9UBE8 527 aa11.56□□□□□ -0.56
SNHG1-213ENST00000540725 LRP12Q9Y561 859 aa11.56□□□□□ -0.56
SNHG1-213ENST00000540725 PLXNB1O43157 2135 aa11.56□□□□□ -0.56
SNHG1-213ENST00000540725 ZNF816-ZNF321PA0A0X1KG74 233 aa11.55□□□□□ -0.56
SNHG1-213ENST00000540725 OR2AT4A6NND4 320 aa11.55□□□□□ -0.56
SNHG1-213ENST00000540725 GLRA1P23415 457 aa11.55□□□□□ -0.56
SNHG1-213ENST00000540725 GABRA2P47869 451 aa11.55□□□□□ -0.56
SNHG1-213ENST00000540725 CBX1P83916 185 aa11.55□□□□□ -0.56
SNHG1-213ENST00000540725 ACSM1Q08AH1 577 aa11.55□□□□□ -0.56
SNHG1-213ENST00000540725 KRT77Q7Z794 578 aa11.55□□□□□ -0.56
SNHG1-213ENST00000540725 TMEM179BQ7Z7N9 219 aa11.55□□□□□ -0.56
SNHG1-213ENST00000540725 CPOQ8IVL8 374 aa11.55□□□□□ -0.56
SNHG1-213ENST00000540725 ADGRG5Q8IZF4 528 aa11.55□□□□□ -0.56
SNHG1-213ENST00000540725 PAPD5Q8NDF8 572 aaKnown RBP11.55□□□□□ -0.56
SNHG1-213ENST00000540725 ASB9Q96DX5 294 aa11.55□□□□□ -0.56
SNHG1-213ENST00000540725 DUS3LQ96G46 650 aaKnown RBP11.55□□□□□ -0.56
SNHG1-213ENST00000540725 CHID1Q9BWS9 393 aa11.55□□□□□ -0.56
SNHG1-213ENST00000540725 ELL3Q9HB65 397 aaPredicted RBP11.55□□□□□ -0.56
SNHG1-213ENST00000540725 DSCAML1Q8TD84 2053 aa11.55□□□□□ -0.56
SNHG1-213ENST00000540725 IGKV1D-17A0A075B6S4 117 aa11.54□□□□□ -0.56
SNHG1-213ENST00000540725 ANKRD61A6NGH8 418 aa11.54□□□□□ -0.56
SNHG1-213ENST00000540725 RHBDL1O75783 438 aa11.54□□□□□ -0.56
SNHG1-213ENST00000540725 HMGN1P05114 100 aa11.54□□□□□ -0.56
SNHG1-213ENST00000540725 MAP2K3P46734 347 aa11.54□□□□□ -0.56
SNHG1-213ENST00000540725 RPS7P62081 194 aaKnown RBP11.54□□□□□ -0.56
SNHG1-213ENST00000540725 GNG3P63215 75 aa11.54□□□□□ -0.56
SNHG1-213ENST00000540725 EGR3Q06889 387 aa11.54□□□□□ -0.56
SNHG1-213ENST00000540725 BLMHQ13867 455 aa11.54□□□□□ -0.56
SNHG1-213ENST00000540725 SLC35D3Q5M8T2 416 aa11.54□□□□□ -0.56
SNHG1-213ENST00000540725 BBS1Q8NFJ9 593 aa11.54□□□□□ -0.56
SNHG1-213ENST00000540725 PPA2Q9H2U2 334 aa11.54□□□□□ -0.56
SNHG1-213ENST00000540725 OR51I2Q9H344 312 aa11.54□□□□□ -0.56
SNHG1-213ENST00000540725 LAMP5Q9UJQ1 280 aa11.54□□□□□ -0.56
SNHG1-213ENST00000540725 ZNF222Q9UK12 451 aa11.54□□□□□ -0.56
SNHG1-213ENST00000540725 A0A0G2JK05 382 aa11.54□□□□□ -0.56
SNHG1-213ENST00000540725 ZNF732B4DXR9 585 aa11.54□□□□□ -0.56
SNHG1-213ENST00000540725 GNGT2O14610 69 aa11.54□□□□□ -0.56
SNHG1-213ENST00000540725 PSG2P11465 335 aa11.54□□□□□ -0.56
SNHG1-213ENST00000540725 OSMP13725 252 aa11.54□□□□□ -0.56
SNHG1-213ENST00000540725 ALOX5APP20292 161 aa11.54□□□□□ -0.56
SNHG1-213ENST00000540725 CALB2P22676 271 aa11.54□□□□□ -0.56
SNHG1-213ENST00000540725 SLC2A5P22732 501 aa11.54□□□□□ -0.56
SNHG1-213ENST00000540725 CDK5Q00535 292 aa11.54□□□□□ -0.56
SNHG1-213ENST00000540725 C2orf68Q2NKX9 166 aa11.54□□□□□ -0.56
SNHG1-213ENST00000540725 CEACAM21Q3KPI0 293 aa11.54□□□□□ -0.56
SNHG1-213ENST00000540725 CEP78Q5JTW2 689 aa11.54□□□□□ -0.56
SNHG1-213ENST00000540725 SLC35E4Q6ICL7 350 aa11.54□□□□□ -0.56
SNHG1-213ENST00000540725 KRT74Q7RTS7 529 aa11.54□□□□□ -0.56
SNHG1-213ENST00000540725 FAM185AQ8N0U4 392 aa11.54□□□□□ -0.56
SNHG1-213ENST00000540725 ZNRF1Q8ND25 227 aa11.54□□□□□ -0.56
SNHG1-213ENST00000540725 BEND2Q8NDZ0 799 aa11.54□□□□□ -0.56
SNHG1-213ENST00000540725 TMEM185AQ8NFB2 350 aa11.54□□□□□ -0.56
SNHG1-213ENST00000540725 OR5D13Q8NGL4 314 aa11.54□□□□□ -0.56
SNHG1-213ENST00000540725 FAM110DQ8TAY7 271 aaPredicted RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms