RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 KCNK6Q9Y257 313 aa8.41□□□□□ -1.06
CTNNA1-243ENST00000540387 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.41□□□□□ -1.06
CTNNA1-243ENST00000540387 ARID1AO14497 2285 aa8.41□□□□□ -1.06
CTNNA1-243ENST00000540387 ERAL1O75616 437 aaKnown RBP8.4□□□□□ -1.06
CTNNA1-243ENST00000540387 HMGN2P05204 90 aaKnown RBP8.4□□□□□ -1.06
CTNNA1-243ENST00000540387 NPPBP16860 134 aa8.4□□□□□ -1.06
CTNNA1-243ENST00000540387 CXCR1P25024 350 aa8.4□□□□□ -1.06
CTNNA1-243ENST00000540387 TMEM33P57088 247 aa8.4□□□□□ -1.06
CTNNA1-243ENST00000540387 PRPS1P60891 318 aa8.4□□□□□ -1.06
CTNNA1-243ENST00000540387 TBPL1P62380 186 aa8.4□□□□□ -1.06
CTNNA1-243ENST00000540387 HSF1Q00613 529 aa8.4□□□□□ -1.06
CTNNA1-243ENST00000540387 TGM3Q08188 693 aa8.4□□□□□ -1.06
CTNNA1-243ENST00000540387 GGTLC2Q14390 218 aa8.4□□□□□ -1.06
CTNNA1-243ENST00000540387 SLC9A3R2Q15599 337 aa8.4□□□□□ -1.06
CTNNA1-243ENST00000540387 RAB11BQ15907 218 aa8.4□□□□□ -1.06
CTNNA1-243ENST00000540387 OR10AC1Q8NH08 325 aa8.4□□□□□ -1.06
CTNNA1-243ENST00000540387 ZNF417Q8TAU3 575 aa8.4□□□□□ -1.06
CTNNA1-243ENST00000540387 HIST1H2AAQ96QV6 131 aa8.4□□□□□ -1.06
CTNNA1-243ENST00000540387 TP53RKQ96S44 253 aa8.4□□□□□ -1.06
CTNNA1-243ENST00000540387 SLC26A1Q9H2B4 701 aa8.4□□□□□ -1.06
CTNNA1-243ENST00000540387 GSKIPQ9P0R6 139 aa8.4□□□□□ -1.06
CTNNA1-243ENST00000540387 TRBV5-7A0A0A0MS05 114 aa8.4□□□□□ -1.07
CTNNA1-243ENST00000540387 FITM1A5D6W6 292 aa8.4□□□□□ -1.07
CTNNA1-243ENST00000540387 M0R296 226 aa8.4□□□□□ -1.07
CTNNA1-243ENST00000540387 CEACAM5P06731 702 aa8.4□□□□□ -1.07
CTNNA1-243ENST00000540387 SEC11BP0C7V7 166 aa8.4□□□□□ -1.07
CTNNA1-243ENST00000540387 CCR5P51681 352 aa8.4□□□□□ -1.07
CTNNA1-243ENST00000540387 COL9A2Q14055 689 aaPredicted RBP8.4□□□□□ -1.07
CTNNA1-243ENST00000540387 ATP6V1FQ16864 119 aa8.4□□□□□ -1.07
CTNNA1-243ENST00000540387 OR8G2PQ6IF36 304 aa8.4□□□□□ -1.07
CTNNA1-243ENST00000540387 MDGA2Q7Z553 956 aa8.4□□□□□ -1.07
CTNNA1-243ENST00000540387 LYG1Q8N1E2 194 aa8.4□□□□□ -1.07
CTNNA1-243ENST00000540387 POC1AQ8NBT0 407 aa8.4□□□□□ -1.07
CTNNA1-243ENST00000540387 LFNGQ8NES3 379 aa8.4□□□□□ -1.07
CTNNA1-243ENST00000540387 NOXO1Q8NFA2 376 aa8.4□□□□□ -1.07
CTNNA1-243ENST00000540387 OR4K13Q8NH42 304 aa8.4□□□□□ -1.07
CTNNA1-243ENST00000540387 RNF128Q8TEB7 428 aa8.4□□□□□ -1.07
CTNNA1-243ENST00000540387 TMEM239Q8WW34 195 aa8.4□□□□□ -1.07
CTNNA1-243ENST00000540387 HAS2Q92819 552 aa8.4□□□□□ -1.07
CTNNA1-243ENST00000540387 TMEM106AQ96A25 262 aa8.4□□□□□ -1.07
CTNNA1-243ENST00000540387 WDR34Q96EX3 536 aa8.4□□□□□ -1.07
CTNNA1-243ENST00000540387 SLC41A2Q96JW4 573 aa8.4□□□□□ -1.07
CTNNA1-243ENST00000540387 C2orf50Q96LR7 162 aa8.4□□□□□ -1.07
CTNNA1-243ENST00000540387 ALKBH7Q9BT30 221 aaPredicted RBP8.4□□□□□ -1.07
CTNNA1-243ENST00000540387 FKBP11Q9NYL4 201 aa8.4□□□□□ -1.07
CTNNA1-243ENST00000540387 FRRS1LQ9P0K9 344 aa8.4□□□□□ -1.07
CTNNA1-243ENST00000540387 GPR34Q9UPC5 381 aa8.4□□□□□ -1.07
CTNNA1-243ENST00000540387 DYRK1BQ9Y463 629 aa8.4□□□□□ -1.07
CTNNA1-243ENST00000540387 WDR45Q9Y484 360 aa8.4□□□□□ -1.07
CTNNA1-243ENST00000540387 WDFY4Q6ZS81 3184 aa8.4□□□□□ -1.07
CTNNA1-243ENST00000540387 A0A1B0GTH9 108 aa8.39□□□□□ -1.07
CTNNA1-243ENST00000540387 A0A1W2PPC4 97 aa8.39□□□□□ -1.07
CTNNA1-243ENST00000540387 METTL12A8MUP2 240 aa8.39□□□□□ -1.07
CTNNA1-243ENST00000540387 IFNL4K9M1U5 179 aa8.39□□□□□ -1.07
CTNNA1-243ENST00000540387 CATP04040 527 aaKnown RBP8.39□□□□□ -1.07
CTNNA1-243ENST00000540387 UMODP07911 640 aa8.39□□□□□ -1.07
CTNNA1-243ENST00000540387 SRP19P09132 144 aaKnown RBP8.39□□□□□ -1.07
CTNNA1-243ENST00000540387 SPTBP11277 2137 aa8.39□□□□□ -1.07
CTNNA1-243ENST00000540387 BCKDHBP21953 392 aa8.39□□□□□ -1.07
CTNNA1-243ENST00000540387 DIO1P49895 249 aa8.39□□□□□ -1.07
CTNNA1-243ENST00000540387 IL15RAQ13261 267 aa8.39□□□□□ -1.07
CTNNA1-243ENST00000540387 NFATC4Q14934 902 aa8.39□□□□□ -1.07
CTNNA1-243ENST00000540387 Q6ZSR6 202 aa8.39□□□□□ -1.07
CTNNA1-243ENST00000540387 GBGT1Q8N5D6 347 aa8.39□□□□□ -1.07
CTNNA1-243ENST00000540387 OR2L3Q8NG85 312 aa8.39□□□□□ -1.07
CTNNA1-243ENST00000540387 MARCH1Q8TCQ1 289 aa8.39□□□□□ -1.07
CTNNA1-243ENST00000540387 TMEM18Q96B42 140 aa8.39□□□□□ -1.07
CTNNA1-243ENST00000540387 BPIFA2Q96DR5 249 aa8.39□□□□□ -1.07
CTNNA1-243ENST00000540387 ZNF514Q96K75 400 aaPredicted RBP8.39□□□□□ -1.07
CTNNA1-243ENST00000540387 WFIKKN1Q96NZ8 548 aa8.39□□□□□ -1.07
CTNNA1-243ENST00000540387 GINS3Q9BRX5 216 aa8.39□□□□□ -1.07
CTNNA1-243ENST00000540387 ARV1Q9H2C2 271 aa8.39□□□□□ -1.07
CTNNA1-243ENST00000540387 METTL8Q9H825 291 aaKnown RBP8.39□□□□□ -1.07
CTNNA1-243ENST00000540387 FGF22Q9HCT0 170 aa8.39□□□□□ -1.07
CTNNA1-243ENST00000540387 B3GAT1Q9P2W7 334 aa8.39□□□□□ -1.07
CTNNA1-243ENST00000540387 SLC17A4Q9Y2C5 497 aa8.39□□□□□ -1.07
CTNNA1-243ENST00000540387 HS3ST3A1Q9Y663 406 aa8.39□□□□□ -1.07
CTNNA1-243ENST00000540387 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.39□□□□□ -1.07
CTNNA1-243ENST00000540387 RBFOX3A6NFN3 312 aa8.39□□□□□ -1.07
CTNNA1-243ENST00000540387 ZNF860A6NHJ4 632 aa8.39□□□□□ -1.07
CTNNA1-243ENST00000540387 SLC17A2O00624 439 aa8.39□□□□□ -1.07
CTNNA1-243ENST00000540387 DNAJB6O75190 326 aa8.39□□□□□ -1.07
CTNNA1-243ENST00000540387 ZIC2O95409 532 aaPredicted RBP8.39□□□□□ -1.07
CTNNA1-243ENST00000540387 FOLR1P15328 257 aa8.39□□□□□ -1.07
CTNNA1-243ENST00000540387 CD46P15529 392 aa8.39□□□□□ -1.07
CTNNA1-243ENST00000540387 ZNF708P17019 499 aa8.39□□□□□ -1.07
CTNNA1-243ENST00000540387 RND2P52198 227 aa8.39□□□□□ -1.07
CTNNA1-243ENST00000540387 TAS2R31P59538 309 aa8.39□□□□□ -1.07
CTNNA1-243ENST00000540387 PMPCAQ10713 525 aa8.39□□□□□ -1.07
CTNNA1-243ENST00000540387 P2RY6Q15077 328 aa8.39□□□□□ -1.07
CTNNA1-243ENST00000540387 TCEA2Q15560 299 aa8.39□□□□□ -1.07
CTNNA1-243ENST00000540387 SLC22A6Q4U2R8 563 aa8.39□□□□□ -1.07
CTNNA1-243ENST00000540387 ZNF658BQ4V348 819 aaPredicted RBP8.39□□□□□ -1.07
CTNNA1-243ENST00000540387 RD3Q7Z3Z2 195 aa8.39□□□□□ -1.07
CTNNA1-243ENST00000540387 KMT5CQ86Y97 462 aa8.39□□□□□ -1.07
CTNNA1-243ENST00000540387 TMEFF1Q8IYR6 380 aa8.39□□□□□ -1.07
CTNNA1-243ENST00000540387 TMEM105Q8N8V8 129 aa8.39□□□□□ -1.07
CTNNA1-243ENST00000540387 APCDD1LQ8NCL9 501 aa8.39□□□□□ -1.07
CTNNA1-243ENST00000540387 OR13H1Q8NG92 308 aa8.39□□□□□ -1.07
CTNNA1-243ENST00000540387 OR51A4Q8NGJ6 313 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms