RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 BRICD5Q6PL45 260 aa10.07□□□□□ -0.8
C11orf54-214ENST00000540113 CLEC18BQ6UXF7 455 aa10.07□□□□□ -0.8
C11orf54-214ENST00000540113 BATF2Q8N1L9 274 aa10.07□□□□□ -0.8
C11orf54-214ENST00000540113 PNLDC1Q8NA58 520 aaKnown RBP10.07□□□□□ -0.8
C11orf54-214ENST00000540113 DCUN1D4Q92564 292 aa10.07□□□□□ -0.8
C11orf54-214ENST00000540113 ALKBH3Q96Q83 286 aaPredicted RBP10.07□□□□□ -0.8
C11orf54-214ENST00000540113 RTBDNQ9BSG5 229 aaPredicted RBP10.07□□□□□ -0.8
C11orf54-214ENST00000540113 URM1Q9BTM9 101 aaKnown RBP10.07□□□□□ -0.8
C11orf54-214ENST00000540113 PECRQ9BY49 303 aa10.07□□□□□ -0.8
C11orf54-214ENST00000540113 ZNF701Q9NV72 531 aaPredicted RBP10.07□□□□□ -0.8
C11orf54-214ENST00000540113 EHFQ9NZC4 300 aa10.07□□□□□ -0.8
C11orf54-214ENST00000540113 GPR132Q9UNW8 380 aa10.07□□□□□ -0.8
C11orf54-214ENST00000540113 CCDC187A0A096LP49 1063 aa10.07□□□□□ -0.8
C11orf54-214ENST00000540113 FAM230AA0A1W2PPH8 454 aa10.07□□□□□ -0.8
C11orf54-214ENST00000540113 F5H0A9 414 aaPredicted RBP10.07□□□□□ -0.8
C11orf54-214ENST00000540113 DHRS3O75911 302 aa10.07□□□□□ -0.8
C11orf54-214ENST00000540113 SCGNO76038 276 aa10.07□□□□□ -0.8
C11orf54-214ENST00000540113 GP1BAP07359 652 aa10.07□□□□□ -0.8
C11orf54-214ENST00000540113 UBBP0CG47 229 aa10.07□□□□□ -0.8
C11orf54-214ENST00000540113 SLC25A4P12235 298 aa10.07□□□□□ -0.8
C11orf54-214ENST00000540113 M6PRP20645 277 aa10.07□□□□□ -0.8
C11orf54-214ENST00000540113 OR3A2P47893 321 aa10.07□□□□□ -0.8
C11orf54-214ENST00000540113 GSK3AP49840 483 aa10.07□□□□□ -0.8
C11orf54-214ENST00000540113 UBA52P62987 128 aaKnown RBP10.07□□□□□ -0.8
C11orf54-214ENST00000540113 SUPT4H1P63272 117 aaKnown RBP10.07□□□□□ -0.8
C11orf54-214ENST00000540113 ECH1Q13011 328 aa10.07□□□□□ -0.8
C11orf54-214ENST00000540113 ANKRD55Q3KP44 614 aa10.07□□□□□ -0.8
C11orf54-214ENST00000540113 C10orf128Q5T292 105 aa10.07□□□□□ -0.8
C11orf54-214ENST00000540113 LPCAT3Q6P1A2 487 aa10.07□□□□□ -0.8
C11orf54-214ENST00000540113 ATRAIDQ6UW56 229 aa10.07□□□□□ -0.8
C11orf54-214ENST00000540113 ACOT7LQ6ZUV0 252 aa10.07□□□□□ -0.8
C11orf54-214ENST00000540113 C20orf196Q8IYI0 205 aa10.07□□□□□ -0.8
C11orf54-214ENST00000540113 OR14L1PQ8NHC6 308 aa10.07□□□□□ -0.8
C11orf54-214ENST00000540113 AKR7LQ8NHP1 331 aa10.07□□□□□ -0.8
C11orf54-214ENST00000540113 SGK3Q96BR1 496 aa10.07□□□□□ -0.8
C11orf54-214ENST00000540113 MRPS24Q96EL2 167 aaKnown RBP10.07□□□□□ -0.8
C11orf54-214ENST00000540113 RRNAD1Q96FB5 475 aaKnown RBP10.07□□□□□ -0.8
C11orf54-214ENST00000540113 PIGQQ9BRB3 760 aa10.07□□□□□ -0.8
C11orf54-214ENST00000540113 CRLF2Q9HC73 371 aa10.07□□□□□ -0.8
C11orf54-214ENST00000540113 CHMP1AQ9HD42 196 aaPredicted RBP10.07□□□□□ -0.8
C11orf54-214ENST00000540113 LOXL2Q9Y4K0 774 aa10.07□□□□□ -0.8
C11orf54-214ENST00000540113 H0YIZ8 118 aa10.06□□□□□ -0.8
C11orf54-214ENST00000540113 TRAPPC6AO75865 159 aa10.06□□□□□ -0.8
C11orf54-214ENST00000540113 SNAPC5O75971 98 aa10.06□□□□□ -0.8
C11orf54-214ENST00000540113 KNG1P01042 644 aa10.06□□□□□ -0.8
C11orf54-214ENST00000540113 IGLV3-1P01715 115 aa10.06□□□□□ -0.8
C11orf54-214ENST00000540113 IGHV3-9P01782 118 aa10.06□□□□□ -0.8
C11orf54-214ENST00000540113 B4GALT1P15291 398 aa10.06□□□□□ -0.8
C11orf54-214ENST00000540113 ZNF133P52736 654 aaPredicted RBP10.06□□□□□ -0.8
C11orf54-214ENST00000540113 SUCLG1P53597 346 aaKnown RBP10.06□□□□□ -0.8
C11orf54-214ENST00000540113 WIPI1Q5MNZ9 446 aaPredicted RBP10.06□□□□□ -0.8
C11orf54-214ENST00000540113 AADACL3Q5VUY0 350 aa10.06□□□□□ -0.8
C11orf54-214ENST00000540113 FOXL2NBQ6ZUU3 175 aa10.06□□□□□ -0.8
C11orf54-214ENST00000540113 TMEM200AQ86VY9 491 aa10.06□□□□□ -0.8
C11orf54-214ENST00000540113 CT55Q8WUE5 264 aa10.06□□□□□ -0.8
C11orf54-214ENST00000540113 DYRK2Q92630 601 aa10.06□□□□□ -0.8
C11orf54-214ENST00000540113 RASL12Q9NYN1 266 aa10.06□□□□□ -0.8
C11orf54-214ENST00000540113 FOXD3Q9UJU5 478 aaPredicted RBP10.06□□□□□ -0.8
C11orf54-214ENST00000540113 TCFL5Q9UL49 500 aa10.06□□□□□ -0.8
C11orf54-214ENST00000540113 MCTS1Q9ULC4 181 aaKnown RBP10.06□□□□□ -0.8
C11orf54-214ENST00000540113 V9GYS6 101 aa10.06□□□□□ -0.8
C11orf54-214ENST00000540113 A0A0B4J2A0 478 aa10.06□□□□□ -0.8
C11orf54-214ENST00000540113 DBX1A6NMT0 343 aa10.06□□□□□ -0.8
C11orf54-214ENST00000540113 CXCL13O43927 109 aa10.06□□□□□ -0.8
C11orf54-214ENST00000540113 OR2F2O95006 317 aa10.06□□□□□ -0.8
C11orf54-214ENST00000540113 CRHP06850 196 aa10.06□□□□□ -0.8
C11orf54-214ENST00000540113 TMEM225BP0DP42 221 aa10.06□□□□□ -0.8
C11orf54-214ENST00000540113 PRF1P14222 555 aa10.06□□□□□ -0.8
C11orf54-214ENST00000540113 NAT1P18440 290 aa10.06□□□□□ -0.8
C11orf54-214ENST00000540113 RFC3P40938 356 aa10.06□□□□□ -0.8
C11orf54-214ENST00000540113 AKR1C2P52895 323 aa10.06□□□□□ -0.8
C11orf54-214ENST00000540113 RRADP55042 308 aa10.06□□□□□ -0.8
C11orf54-214ENST00000540113 AKR1C1Q04828 323 aa10.06□□□□□ -0.8
C11orf54-214ENST00000540113 OR2F1Q13607 317 aa10.06□□□□□ -0.8
C11orf54-214ENST00000540113 PDCD1Q15116 288 aa10.06□□□□□ -0.8
C11orf54-214ENST00000540113 TMEM128Q5BJH2 165 aa10.06□□□□□ -0.8
C11orf54-214ENST00000540113 DCAF12Q5T6F0 453 aa10.06□□□□□ -0.8
C11orf54-214ENST00000540113 FOXRED2Q8IWF2 684 aa10.06□□□□□ -0.8
C11orf54-214ENST00000540113 INO80EQ8NBZ0 244 aaPredicted RBP10.06□□□□□ -0.8
C11orf54-214ENST00000540113 FGFBP3Q8TAT2 258 aa10.06□□□□□ -0.8
C11orf54-214ENST00000540113 ASB13Q8WXK3 278 aa10.06□□□□□ -0.8
C11orf54-214ENST00000540113 OR10C1Q96KK4 312 aa10.06□□□□□ -0.8
C11orf54-214ENST00000540113 S100A13Q99584 98 aa10.06□□□□□ -0.8
C11orf54-214ENST00000540113 OCSTAMPQ9BR26 566 aa10.06□□□□□ -0.8
C11orf54-214ENST00000540113 NAA11Q9BSU3 229 aaPredicted RBP10.06□□□□□ -0.8
C11orf54-214ENST00000540113 RNF126Q9BV68 326 aa10.06□□□□□ -0.8
C11orf54-214ENST00000540113 SHPKQ9UHJ6 478 aa10.06□□□□□ -0.8
C11orf54-214ENST00000540113 MSGN1A6NI15 193 aa10.05□□□□□ -0.8
C11orf54-214ENST00000540113 MSTNO14793 375 aa10.05□□□□□ -0.8
C11orf54-214ENST00000540113 EIF1BO60739 113 aaKnown RBP10.05□□□□□ -0.8
C11orf54-214ENST00000540113 CBR3O75828 277 aa10.05□□□□□ -0.8
C11orf54-214ENST00000540113 APOC3P02656 99 aa10.05□□□□□ -0.8
C11orf54-214ENST00000540113 HOXB5P09067 269 aa10.05□□□□□ -0.8
C11orf54-214ENST00000540113 HLA-GP17693 338 aa10.05□□□□□ -0.8
C11orf54-214ENST00000540113 CTSSP25774 331 aa10.05□□□□□ -0.8
C11orf54-214ENST00000540113 PSMB6P28072 239 aa10.05□□□□□ -0.8
C11orf54-214ENST00000540113 THBS4P35443 961 aa10.05□□□□□ -0.8
C11orf54-214ENST00000540113 RAC1P63000 192 aa10.05□□□□□ -0.8
C11orf54-214ENST00000540113 DBX2Q6ZNG2 339 aa10.05□□□□□ -0.8
C11orf54-214ENST00000540113 FAM89BQ8N5H3 189 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms